RNA–Protein interactions for RNA: ENST00000261007.9

CHRNA1-201, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene CHRNA1, Length 1,980 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-201ENST00000261007 SMCR8Q8TEV9 937 aaPredicted RBP11.84□□□□□ -0.51
CHRNA1-201ENST00000261007 RAD54LQ92698 747 aa11.84□□□□□ -0.51
CHRNA1-201ENST00000261007 CNOT6LQ96LI5 555 aaKnown RBP11.84□□□□□ -0.51
CHRNA1-201ENST00000261007 MBOAT7Q96N66 472 aa11.84□□□□□ -0.51
CHRNA1-201ENST00000261007 PLIN2Q99541 437 aa11.84□□□□□ -0.51
CHRNA1-201ENST00000261007 NOC4LQ9BVI4 516 aaKnown RBP11.84□□□□□ -0.51
CHRNA1-201ENST00000261007 TLR10Q9BXR5 811 aa11.84□□□□□ -0.51
CHRNA1-201ENST00000261007 EDEM3Q9BZQ6 932 aa11.84□□□□□ -0.51
CHRNA1-201ENST00000261007 TMBIM4Q9HC24 238 aa11.84□□□□□ -0.51
CHRNA1-201ENST00000261007 KCNQ5Q9NR82 932 aa11.84□□□□□ -0.51
CHRNA1-201ENST00000261007 BMP2KQ9NSY1 1161 aaPredicted RBP11.84□□□□□ -0.51
CHRNA1-201ENST00000261007 RBM12Q9NTZ6 932 aaKnown RBP11.84□□□□□ -0.51
CHRNA1-201ENST00000261007 ARHGAP20Q9P2F6 1191 aa11.84□□□□□ -0.51
CHRNA1-201ENST00000261007 F5H6K3 240 aa11.83□□□□□ -0.52
CHRNA1-201ENST00000261007 SLC16A2P36021 539 aa11.83□□□□□ -0.52
CHRNA1-201ENST00000261007 HSPA9P38646 679 aaKnown RBP11.83□□□□□ -0.52
CHRNA1-201ENST00000261007 MAGEA1P43355 309 aa11.83□□□□□ -0.52
CHRNA1-201ENST00000261007 MTIF2P46199 727 aaKnown RBP11.83□□□□□ -0.52
CHRNA1-201ENST00000261007 KLRC3Q07444 240 aa11.83□□□□□ -0.52
CHRNA1-201ENST00000261007 LACTB2Q53H82 288 aaPredicted RBP11.83□□□□□ -0.52
CHRNA1-201ENST00000261007 KCTD17Q8N5Z5 321 aa11.83□□□□□ -0.52
CHRNA1-201ENST00000261007 MIEF2Q96C03 454 aa11.83□□□□□ -0.52
CHRNA1-201ENST00000261007 NOX5Q96PH1 765 aa11.83□□□□□ -0.52
CHRNA1-201ENST00000261007 PNMA5Q96PV4 448 aa11.83□□□□□ -0.52
CHRNA1-201ENST00000261007 CAMKK2Q96RR4 588 aa11.83□□□□□ -0.52
CHRNA1-201ENST00000261007 ARHGEF10LQ9HCE6 1279 aa11.83□□□□□ -0.52
CHRNA1-201ENST00000261007 PLCB1Q9NQ66 1216 aa11.83□□□□□ -0.52
CHRNA1-201ENST00000261007 ODF2LQ9ULJ1 636 aa11.83□□□□□ -0.52
CHRNA1-201ENST00000261007 PCDHA12Q9UN75 941 aa11.83□□□□□ -0.52
CHRNA1-201ENST00000261007 GMNCA6NCL1 334 aa11.83□□□□□ -0.52
CHRNA1-201ENST00000261007 HEXIM1O94992 359 aaKnown RBP11.83□□□□□ -0.52
CHRNA1-201ENST00000261007 GLI1P08151 1106 aa11.83□□□□□ -0.52
CHRNA1-201ENST00000261007 BMP3P12645 472 aa11.83□□□□□ -0.52
CHRNA1-201ENST00000261007 ERCC3P19447 782 aa11.83□□□□□ -0.52
CHRNA1-201ENST00000261007 CARSP49589 748 aaKnown RBP11.83□□□□□ -0.52
CHRNA1-201ENST00000261007 KLK7P49862 253 aa11.83□□□□□ -0.52
CHRNA1-201ENST00000261007 LRRC63Q05C16 580 aa11.83□□□□□ -0.52
CHRNA1-201ENST00000261007 IFT88Q13099 833 aa11.83□□□□□ -0.52
CHRNA1-201ENST00000261007 CRYMQ14894 314 aa11.83□□□□□ -0.52
CHRNA1-201ENST00000261007 UBE2SQ16763 222 aa11.83□□□□□ -0.52
CHRNA1-201ENST00000261007 SYDE2Q5VT97 1194 aa11.83□□□□□ -0.52
CHRNA1-201ENST00000261007 KLHDC7AQ5VTJ3 777 aa11.83□□□□□ -0.52
CHRNA1-201ENST00000261007 FKBP1CQ5VVH2 108 aa11.83□□□□□ -0.52
CHRNA1-201ENST00000261007 RSBN1LQ6PCB5 846 aaPredicted RBP11.83□□□□□ -0.52
CHRNA1-201ENST00000261007 KRT26Q7Z3Y9 468 aa11.83□□□□□ -0.52
CHRNA1-201ENST00000261007 FBXO11Q86XK2 927 aa11.83□□□□□ -0.52
CHRNA1-201ENST00000261007 PARP9Q8IXQ6 854 aa11.83□□□□□ -0.52
CHRNA1-201ENST00000261007 GUF1Q8N442 669 aaKnown RBP11.83□□□□□ -0.52
CHRNA1-201ENST00000261007 TTLL6Q8N841 843 aa11.83□□□□□ -0.52
CHRNA1-201ENST00000261007 CYFIP2Q96F07 1278 aa11.83□□□□□ -0.52
CHRNA1-201ENST00000261007 CCDC114Q96M63 670 aa11.83□□□□□ -0.52
CHRNA1-201ENST00000261007 HINFPQ9BQA5 517 aa11.83□□□□□ -0.52
CHRNA1-201ENST00000261007 ANO3Q9BYT9 981 aa11.83□□□□□ -0.52
CHRNA1-201ENST00000261007 TDRD3Q9H7E2 651 aaKnown RBP11.83□□□□□ -0.52
CHRNA1-201ENST00000261007 EPB41L5Q9HCM4 733 aa11.83□□□□□ -0.52
CHRNA1-201ENST00000261007 BLOC1S4Q9NUP1 217 aa11.83□□□□□ -0.52
CHRNA1-201ENST00000261007 NFU1Q9UMS0 254 aa11.83□□□□□ -0.52
CHRNA1-201ENST00000261007 SSU72P8A0A1W2PR75 194 aa11.82□□□□□ -0.52
CHRNA1-201ENST00000261007 C5orf60A6NFR6 353 aa11.82□□□□□ -0.52
CHRNA1-201ENST00000261007 GOLGA6L10A6NI86 522 aa11.82□□□□□ -0.52
CHRNA1-201ENST00000261007 E7EVH7 732 aa11.82□□□□□ -0.52
CHRNA1-201ENST00000261007 EDIL3O43854 480 aa11.82□□□□□ -0.52
CHRNA1-201ENST00000261007 AKR1B10O60218 316 aa11.82□□□□□ -0.52
CHRNA1-201ENST00000261007 NDUFB10O96000 172 aa11.82□□□□□ -0.52
CHRNA1-201ENST00000261007 FAM153BP0C7A2 387 aa11.82□□□□□ -0.52
CHRNA1-201ENST00000261007 SLC8A1P32418 973 aa11.82□□□□□ -0.52
CHRNA1-201ENST00000261007 EIF4A3P38919 411 aaKnown RBP11.82□□□□□ -0.52
CHRNA1-201ENST00000261007 CACNB3P54284 484 aa11.82□□□□□ -0.52
CHRNA1-201ENST00000261007 BIRC3Q13489 604 aa11.82□□□□□ -0.52
CHRNA1-201ENST00000261007 FAM153CQ494X1 144 aa11.82□□□□□ -0.52
CHRNA1-201ENST00000261007 CENPPQ6IPU0 288 aa11.82□□□□□ -0.52
CHRNA1-201ENST00000261007 CCDC84Q86UT8 332 aaPredicted RBP11.82□□□□□ -0.52
CHRNA1-201ENST00000261007 OGFOD1Q8N543 542 aa11.82□□□□□ -0.52
CHRNA1-201ENST00000261007 ERMNQ8TAM6 284 aa11.82□□□□□ -0.52
CHRNA1-201ENST00000261007 FAM151AQ8WW52 585 aa11.82□□□□□ -0.52
CHRNA1-201ENST00000261007 SGSM3Q96HU1 749 aa11.82□□□□□ -0.52
CHRNA1-201ENST00000261007 CSRNP1Q96S65 589 aa11.82□□□□□ -0.52
CHRNA1-201ENST00000261007 FAM153AQ9UHL3 310 aa11.82□□□□□ -0.52
CHRNA1-201ENST00000261007 MYH7BA7E2Y1 1941 aa11.82□□□□□ -0.52
CHRNA1-201ENST00000261007 RBAK-RBAKDNI3L0D1 243 aa11.81□□□□□ -0.52
CHRNA1-201ENST00000261007 CES2O00748 559 aa11.81□□□□□ -0.52
CHRNA1-201ENST00000261007 MYBP10242 640 aa11.81□□□□□ -0.52
CHRNA1-201ENST00000261007 GHRP10912 638 aa11.81□□□□□ -0.52
CHRNA1-201ENST00000261007 EZRP15311 586 aaKnown RBP11.81□□□□□ -0.52
CHRNA1-201ENST00000261007 SEC24CP53992 1094 aa11.81□□□□□ -0.52
CHRNA1-201ENST00000261007 GUCY2DQ02846 1103 aa11.81□□□□□ -0.52
CHRNA1-201ENST00000261007 ASTE1Q2TB18 679 aaPredicted RBP11.81□□□□□ -0.52
CHRNA1-201ENST00000261007 ANKRD40Q6AI12 368 aa11.81□□□□□ -0.52
CHRNA1-201ENST00000261007 FUKQ8N0W3 1084 aa11.81□□□□□ -0.52
CHRNA1-201ENST00000261007 LRRC15Q8TF66 581 aa11.81□□□□□ -0.52
CHRNA1-201ENST00000261007 SLC16A10Q8TF71 515 aa11.81□□□□□ -0.52
CHRNA1-201ENST00000261007 HAS1Q92839 578 aa11.81□□□□□ -0.52
CHRNA1-201ENST00000261007 TSG101Q99816 390 aa11.81□□□□□ -0.52
CHRNA1-201ENST00000261007 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.81□□□□□ -0.52
CHRNA1-201ENST00000261007 KCNMB3Q9NPA1 279 aa11.81□□□□□ -0.52
CHRNA1-201ENST00000261007 ZNF219Q9P2Y4 722 aaPredicted RBP11.81□□□□□ -0.52
CHRNA1-201ENST00000261007 SIK3Q9Y2K2 1263 aa11.81□□□□□ -0.52
CHRNA1-201ENST00000261007 SPDYE2BA6NHP3 402 aa11.81□□□□□ -0.52
CHRNA1-201ENST00000261007 MYMKA6NI61 221 aa11.81□□□□□ -0.52
CHRNA1-201ENST00000261007 SPDYE3A6NKU9 549 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms