RNA–Protein interactions for RNA: ENST00000259006.7

LIMD2-201, Transcript of LIM domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMD2, Length 3,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-201ENST00000259006 BAP1Q92560 729 aa15.19■□□□□ 0.02
LIMD2-201ENST00000259006 CYFIP2Q96F07 1278 aa15.19■□□□□ 0.02
LIMD2-201ENST00000259006 FAM84BQ96KN1 310 aaPredicted RBP15.19■□□□□ 0.02
LIMD2-201ENST00000259006 NEUROG2Q9H2A3 272 aa15.19■□□□□ 0.02
LIMD2-201ENST00000259006 THRAP3Q9Y2W1 955 aaKnown RBP15.19■□□□□ 0.02
LIMD2-201ENST00000259006 BCL9LQ86UU0 1499 aa15.19■□□□□ 0.02
LIMD2-201ENST00000259006 GCOM1H8Y6P7 765 aaPredicted RBP15.19■□□□□ 0.02
LIMD2-201ENST00000259006 MYZAPP0CAP1 466 aa15.19■□□□□ 0.02
LIMD2-201ENST00000259006 SCTRP47872 440 aa15.19■□□□□ 0.02
LIMD2-201ENST00000259006 IFFO1Q0D2I5 559 aa15.19■□□□□ 0.02
LIMD2-201ENST00000259006 KLHL30Q0D2K2 578 aa15.19■□□□□ 0.02
LIMD2-201ENST00000259006 PDXDC1Q6P996 788 aa15.19■□□□□ 0.02
LIMD2-201ENST00000259006 KDM7AQ6ZMT4 941 aa15.19■□□□□ 0.02
LIMD2-201ENST00000259006 CELF1Q92879 486 aaKnown RBP15.19■□□□□ 0.02
LIMD2-201ENST00000259006 CAVIN3Q969G5 261 aa15.19■□□□□ 0.02
LIMD2-201ENST00000259006 TSPAN18Q96SJ8 248 aa15.19■□□□□ 0.02
LIMD2-201ENST00000259006 CCSER1Q9C0I3 900 aa15.19■□□□□ 0.02
LIMD2-201ENST00000259006 QTRT2Q9H974 415 aaKnown RBP15.19■□□□□ 0.02
LIMD2-201ENST00000259006 ZFATQ9P243 1243 aa15.19■□□□□ 0.02
LIMD2-201ENST00000259006 AMACRQ9UHK6 382 aa15.19■□□□□ 0.02
LIMD2-201ENST00000259006 NPHP3-ACAD11A0A0J9YXS1 232 aa15.18■□□□□ 0.02
LIMD2-201ENST00000259006 TDP2O95551 362 aa15.18■□□□□ 0.02
LIMD2-201ENST00000259006 ITGA4P13612 1032 aa15.18■□□□□ 0.02
LIMD2-201ENST00000259006 HSD17B3P37058 310 aa15.18■□□□□ 0.02
LIMD2-201ENST00000259006 MPP3Q13368 585 aa15.18■□□□□ 0.02
LIMD2-201ENST00000259006 MKRN4PQ13434 485 aaPredicted RBP15.18■□□□□ 0.02
LIMD2-201ENST00000259006 ANKRD20A8PQ5CZ79 823 aa15.18■□□□□ 0.02
LIMD2-201ENST00000259006 CPLX4Q7Z7G2 160 aa15.18■□□□□ 0.02
LIMD2-201ENST00000259006 COA7Q96BR5 231 aa15.18■□□□□ 0.02
LIMD2-201ENST00000259006 UBE2OQ9C0C9 1292 aaKnown RBP15.18■□□□□ 0.02
LIMD2-201ENST00000259006 FLT1P17948 1338 aa15.18■□□□□ 0.02
LIMD2-201ENST00000259006 DAPK3O43293 454 aa15.18■□□□□ 0.02
LIMD2-201ENST00000259006 ELF3P78545 371 aaPredicted RBP15.18■□□□□ 0.02
LIMD2-201ENST00000259006 VPS72Q15906 364 aa15.18■□□□□ 0.02
LIMD2-201ENST00000259006 ZNF444Q8N0Y2 327 aaPredicted RBP15.18■□□□□ 0.02
LIMD2-201ENST00000259006 NSUN4Q96CB9 384 aaKnown RBP15.18■□□□□ 0.02
LIMD2-201ENST00000259006 BRIP1Q9BX63 1249 aa15.18■□□□□ 0.02
LIMD2-201ENST00000259006 EBF2Q9HAK2 575 aa15.18■□□□□ 0.02
LIMD2-201ENST00000259006 BCL9O00512 1426 aa15.18■□□□□ 0.02
LIMD2-201ENST00000259006 SPDYE5A6NIY4 337 aa15.18■□□□□ 0.02
LIMD2-201ENST00000259006 AMPD3Q01432 767 aa15.18■□□□□ 0.02
LIMD2-201ENST00000259006 LLGL1Q15334 1064 aa15.18■□□□□ 0.02
LIMD2-201ENST00000259006 SOGA3Q5TF21 947 aa15.18■□□□□ 0.02
LIMD2-201ENST00000259006 DZIP1Q86YF9 867 aaKnown RBP15.18■□□□□ 0.02
LIMD2-201ENST00000259006 MAPKAPK5Q8IW41 473 aa15.18■□□□□ 0.02
LIMD2-201ENST00000259006 SNX29Q8TEQ0 813 aa15.18■□□□□ 0.02
LIMD2-201ENST00000259006 DDX12PQ92771 950 aa15.18■□□□□ 0.02
LIMD2-201ENST00000259006 MTA3Q9BTC8 594 aa15.18■□□□□ 0.02
LIMD2-201ENST00000259006 CNOT8Q9UFF9 292 aaKnown RBP15.18■□□□□ 0.02
LIMD2-201ENST00000259006 MAD2L2Q9UI95 211 aa15.18■□□□□ 0.02
LIMD2-201ENST00000259006 FBXL5Q9UKA1 691 aa15.18■□□□□ 0.02
LIMD2-201ENST00000259006 FRMPD2Q68DX3 1309 aaPredicted RBP15.17■□□□□ 0.02
LIMD2-201ENST00000259006 COL14A1Q05707 1796 aaKnown RBP15.17■□□□□ 0.02
LIMD2-201ENST00000259006 DPPA5A6NC42 116 aa15.17■□□□□ 0.02
LIMD2-201ENST00000259006 EPB41P11171 864 aaKnown RBP15.17■□□□□ 0.02
LIMD2-201ENST00000259006 CNGA1P29973 690 aa15.17■□□□□ 0.02
LIMD2-201ENST00000259006 MAGOHP61326 146 aaKnown RBP15.17■□□□□ 0.02
LIMD2-201ENST00000259006 ITGB3BPQ13352 177 aaPredicted RBP15.17■□□□□ 0.02
LIMD2-201ENST00000259006 NONOQ15233 471 aaKnown RBP eCLIP15.17■□□□□ 0.02
LIMD2-201ENST00000259006 KRT71Q3SY84 523 aa15.17■□□□□ 0.02
LIMD2-201ENST00000259006 HGSNATQ68CP4 663 aa15.17■□□□□ 0.02
LIMD2-201ENST00000259006 SPTY2D1Q68D10 685 aaPredicted RBP15.17■□□□□ 0.02
LIMD2-201ENST00000259006 CCDC84Q86UT8 332 aaPredicted RBP15.17■□□□□ 0.02
LIMD2-201ENST00000259006 TXNRD3Q86VQ6 643 aa15.17■□□□□ 0.02
LIMD2-201ENST00000259006 ZSCAN29Q8IWY8 852 aaPredicted RBP15.17■□□□□ 0.02
LIMD2-201ENST00000259006 TGFBRAP1Q8WUH2 860 aa15.17■□□□□ 0.02
LIMD2-201ENST00000259006 MAGOHBQ96A72 148 aaKnown RBP15.17■□□□□ 0.02
LIMD2-201ENST00000259006 GPR101Q96P66 508 aaPredicted RBP15.17■□□□□ 0.02
LIMD2-201ENST00000259006 LZTS2Q9BRK4 669 aa15.17■□□□□ 0.02
LIMD2-201ENST00000259006 CCDC113Q9H0I3 377 aa15.17■□□□□ 0.02
LIMD2-201ENST00000259006 GDF3Q9NR23 364 aa15.17■□□□□ 0.02
LIMD2-201ENST00000259006 ANKIB1Q9P2G1 1089 aa15.17■□□□□ 0.02
LIMD2-201ENST00000259006 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.17■□□□□ 0.02
LIMD2-201ENST00000259006 C2CD2Q9Y426 696 aa15.17■□□□□ 0.02
LIMD2-201ENST00000259006 DISP2A7MBM2 1401 aa15.17■□□□□ 0.02
LIMD2-201ENST00000259006 STXBP3O00186 592 aa15.17■□□□□ 0.02
LIMD2-201ENST00000259006 ERFEQ4G0M1 354 aa15.17■□□□□ 0.02
LIMD2-201ENST00000259006 PIGSQ96S52 555 aa15.17■□□□□ 0.02
LIMD2-201ENST00000259006 PARP4Q9UKK3 1724 aaKnown RBP15.17■□□□□ 0.02
LIMD2-201ENST00000259006 MGRN1O60291 552 aa15.16■□□□□ 0.02
LIMD2-201ENST00000259006 TNNI2P48788 182 aa15.16■□□□□ 0.02
LIMD2-201ENST00000259006 RPS6KA1Q15418 735 aa15.16■□□□□ 0.02
LIMD2-201ENST00000259006 GALNT17Q6IS24 598 aa15.16■□□□□ 0.02
LIMD2-201ENST00000259006 ZNF662Q6ZS27 426 aa15.16■□□□□ 0.02
LIMD2-201ENST00000259006 SEPT12Q8IYM1 358 aa15.16■□□□□ 0.02
LIMD2-201ENST00000259006 LARP4BQ92615 738 aaKnown RBP15.16■□□□□ 0.02
LIMD2-201ENST00000259006 GJD4Q96KN9 370 aaPredicted RBP15.16■□□□□ 0.02
LIMD2-201ENST00000259006 IQCGQ9H095 443 aaKnown RBP15.16■□□□□ 0.02
LIMD2-201ENST00000259006 A0A1W2PQJ5 194 aa15.16■□□□□ 0.02
LIMD2-201ENST00000259006 ABL2P42684 1182 aa15.16■□□□□ 0.02
LIMD2-201ENST00000259006 GRB10Q13322 594 aa15.16■□□□□ 0.02
LIMD2-201ENST00000259006 BLMHQ13867 455 aa15.16■□□□□ 0.02
LIMD2-201ENST00000259006 TCERG1LQ5VWI1 586 aa15.16■□□□□ 0.02
LIMD2-201ENST00000259006 CENPPQ6IPU0 288 aa15.16■□□□□ 0.02
LIMD2-201ENST00000259006 MTHFD1LQ6UB35 978 aa15.16■□□□□ 0.02
LIMD2-201ENST00000259006 NEK8Q86SG6 692 aa15.16■□□□□ 0.02
LIMD2-201ENST00000259006 KCNV2Q8TDN2 545 aa15.16■□□□□ 0.02
LIMD2-201ENST00000259006 SELENOSQ9BQE4 189 aa15.16■□□□□ 0.02
LIMD2-201ENST00000259006 BLOC1S4Q9NUP1 217 aa15.16■□□□□ 0.02
LIMD2-201ENST00000259006 ATP8A1Q9Y2Q0 1164 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms