RNA–Protein interactions for RNA: ENST00000257414.12

SEMA6A-201, Transcript of semaphorin 6A, humanhuman

TSL 1 (best) BASIC

Gene SEMA6A, Length 4,256 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6A-201ENST00000257414 HOMER3Q9NSC5 361 aa10.95□□□□□ -0.66
SEMA6A-201ENST00000257414 LARSQ9P2J5 1176 aaKnown RBP10.95□□□□□ -0.66
SEMA6A-201ENST00000257414 FBXL5Q9UKA1 691 aa10.95□□□□□ -0.66
SEMA6A-201ENST00000257414 CRYBG1Q9Y4K1 1723 aa10.95□□□□□ -0.66
SEMA6A-201ENST00000257414 SART1O43290 800 aaKnown RBP10.95□□□□□ -0.66
SEMA6A-201ENST00000257414 DAPK3O43293 454 aa10.95□□□□□ -0.66
SEMA6A-201ENST00000257414 SLC9A1P19634 815 aa10.95□□□□□ -0.66
SEMA6A-201ENST00000257414 SLCO1A2P46721 670 aa10.95□□□□□ -0.66
SEMA6A-201ENST00000257414 SP4Q02446 784 aa10.95□□□□□ -0.66
SEMA6A-201ENST00000257414 ZNF543Q08ER8 600 aa10.95□□□□□ -0.66
SEMA6A-201ENST00000257414 BIRC3Q13489 604 aa10.95□□□□□ -0.66
SEMA6A-201ENST00000257414 CCDC197Q8NCU1 140 aa10.95□□□□□ -0.66
SEMA6A-201ENST00000257414 MXD3Q9BW11 206 aa10.95□□□□□ -0.66
SEMA6A-201ENST00000257414 PARVGQ9HBI0 331 aa10.95□□□□□ -0.66
SEMA6A-201ENST00000257414 DNAJC12Q9UKB3 198 aa10.95□□□□□ -0.66
SEMA6A-201ENST00000257414 SCN11AQ9UI33 1791 aa10.95□□□□□ -0.66
SEMA6A-201ENST00000257414 CACNB3P54284 484 aa10.95□□□□□ -0.66
SEMA6A-201ENST00000257414 MAGOHP61326 146 aaKnown RBP10.95□□□□□ -0.66
SEMA6A-201ENST00000257414 NAA25Q14CX7 972 aa10.95□□□□□ -0.66
SEMA6A-201ENST00000257414 FBXW10Q5XX13 1052 aa10.95□□□□□ -0.66
SEMA6A-201ENST00000257414 OGFOD1Q8N543 542 aa10.95□□□□□ -0.66
SEMA6A-201ENST00000257414 ABCB11O95342 1321 aa10.94□□□□□ -0.66
SEMA6A-201ENST00000257414 PPEF1O14829 653 aaPredicted RBP10.94□□□□□ -0.66
SEMA6A-201ENST00000257414 BUB1BO60566 1050 aaPredicted RBP10.94□□□□□ -0.66
SEMA6A-201ENST00000257414 POLR2MP0CAP2 368 aa10.94□□□□□ -0.66
SEMA6A-201ENST00000257414 MYBL2P10244 700 aa10.94□□□□□ -0.66
SEMA6A-201ENST00000257414 LSP1P33241 339 aa10.94□□□□□ -0.66
SEMA6A-201ENST00000257414 MIER3Q7Z3K6 550 aa10.94□□□□□ -0.66
SEMA6A-201ENST00000257414 CREG2Q8IUH2 290 aa10.94□□□□□ -0.66
SEMA6A-201ENST00000257414 CCDC127Q96BQ5 260 aa10.94□□□□□ -0.66
SEMA6A-201ENST00000257414 PCIF1Q9H4Z3 704 aa10.94□□□□□ -0.66
SEMA6A-201ENST00000257414 TYW1Q9NV66 732 aaKnown RBP10.94□□□□□ -0.66
SEMA6A-201ENST00000257414 SNX24Q9Y343 169 aa10.94□□□□□ -0.66
SEMA6A-201ENST00000257414 N4BP2Q86UW6 1770 aaPredicted RBP10.94□□□□□ -0.66
SEMA6A-201ENST00000257414 GAS8O95995 478 aa10.94□□□□□ -0.66
SEMA6A-201ENST00000257414 UCHL3P15374 230 aa10.94□□□□□ -0.66
SEMA6A-201ENST00000257414 SMTNP53814 917 aa10.94□□□□□ -0.66
SEMA6A-201ENST00000257414 PPP4CP60510 307 aa10.94□□□□□ -0.66
SEMA6A-201ENST00000257414 AP3B2Q13367 1082 aa10.94□□□□□ -0.66
SEMA6A-201ENST00000257414 ZNF211Q13398 564 aaPredicted RBP10.94□□□□□ -0.66
SEMA6A-201ENST00000257414 INTS8Q75QN2 995 aaKnown RBP10.94□□□□□ -0.66
SEMA6A-201ENST00000257414 DDX42Q86XP3 938 aaKnown RBP eCLIP10.94□□□□□ -0.66
SEMA6A-201ENST00000257414 MSL3Q8N5Y2 521 aaKnown RBP10.94□□□□□ -0.66
SEMA6A-201ENST00000257414 OR2W6PQ8NHA6 318 aa10.94□□□□□ -0.66
SEMA6A-201ENST00000257414 IFT74Q96LB3 600 aa10.94□□□□□ -0.66
SEMA6A-201ENST00000257414 MYCBPQ99417 103 aaPredicted RBP10.94□□□□□ -0.66
SEMA6A-201ENST00000257414 JPH2Q9BR39 696 aaPredicted RBP10.94□□□□□ -0.66
SEMA6A-201ENST00000257414 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.94□□□□□ -0.66
SEMA6A-201ENST00000257414 GMNCA6NCL1 334 aa10.94□□□□□ -0.66
SEMA6A-201ENST00000257414 SYF2O95926 243 aaKnown RBP10.94□□□□□ -0.66
SEMA6A-201ENST00000257414 MDH1P40925 334 aaKnown RBP10.94□□□□□ -0.66
SEMA6A-201ENST00000257414 LACTBP83111 547 aaPredicted RBP10.94□□□□□ -0.66
SEMA6A-201ENST00000257414 ZRSR2Q15696 482 aaKnown RBP10.94□□□□□ -0.66
SEMA6A-201ENST00000257414 SNCBQ16143 134 aa10.94□□□□□ -0.66
SEMA6A-201ENST00000257414 TBC1D10BQ4KMP7 808 aaPredicted RBP10.94□□□□□ -0.66
SEMA6A-201ENST00000257414 GLYCTKQ8IVS8 523 aa10.94□□□□□ -0.66
SEMA6A-201ENST00000257414 CPXCR1Q8N123 301 aa10.94□□□□□ -0.66
SEMA6A-201ENST00000257414 ANKS1AQ92625 1134 aa10.94□□□□□ -0.66
SEMA6A-201ENST00000257414 RSRC1Q96IZ7 334 aaKnown RBP10.94□□□□□ -0.66
SEMA6A-201ENST00000257414 EPN3Q9H201 632 aa10.94□□□□□ -0.66
SEMA6A-201ENST00000257414 TUBGCP6Q96RT7 1819 aa10.93□□□□□ -0.66
SEMA6A-201ENST00000257414 PASKQ96RG2 1323 aa10.93□□□□□ -0.66
SEMA6A-201ENST00000257414 ATP2A1O14983 1001 aa10.93□□□□□ -0.66
SEMA6A-201ENST00000257414 MEFVO15553 781 aaPredicted RBP10.93□□□□□ -0.66
SEMA6A-201ENST00000257414 HMGB2P26583 209 aaKnown RBP10.93□□□□□ -0.66
SEMA6A-201ENST00000257414 SEC24CP53992 1094 aa10.93□□□□□ -0.66
SEMA6A-201ENST00000257414 EIF3BP55884 814 aaKnown RBP10.93□□□□□ -0.66
SEMA6A-201ENST00000257414 PPP2R2AP63151 447 aa10.93□□□□□ -0.66
SEMA6A-201ENST00000257414 PTK2Q05397 1052 aa10.93□□□□□ -0.66
SEMA6A-201ENST00000257414 PPP4R3AQ6IN85 833 aa10.93□□□□□ -0.66
SEMA6A-201ENST00000257414 FRMD5Q7Z6J6 570 aa10.93□□□□□ -0.66
SEMA6A-201ENST00000257414 USP38Q8NB14 1042 aa10.93□□□□□ -0.66
SEMA6A-201ENST00000257414 MRRFQ96E11 262 aaKnown RBP10.93□□□□□ -0.66
SEMA6A-201ENST00000257414 RNPC3Q96LT9 517 aaKnown RBP10.93□□□□□ -0.66
SEMA6A-201ENST00000257414 CNOT10Q9H9A5 744 aaKnown RBP10.93□□□□□ -0.66
SEMA6A-201ENST00000257414 RGPD5Q99666 1765 aa10.93□□□□□ -0.66
SEMA6A-201ENST00000257414 ZSCAN5CA6NGD5 496 aaPredicted RBP10.93□□□□□ -0.66
SEMA6A-201ENST00000257414 CLTAP09496 248 aa10.93□□□□□ -0.66
SEMA6A-201ENST00000257414 BMP3P12645 472 aa10.93□□□□□ -0.66
SEMA6A-201ENST00000257414 SETDB1Q15047 1291 aa10.93□□□□□ -0.66
SEMA6A-201ENST00000257414 SYDE2Q5VT97 1194 aa10.93□□□□□ -0.66
SEMA6A-201ENST00000257414 AENQ8WTP8 325 aaKnown RBP10.93□□□□□ -0.66
SEMA6A-201ENST00000257414 ZNF473Q8WTR7 871 aaKnown RBP10.93□□□□□ -0.66
SEMA6A-201ENST00000257414 CCT8L2Q96SF2 557 aa10.93□□□□□ -0.66
SEMA6A-201ENST00000257414 TEKT3Q9BXF9 490 aa10.93□□□□□ -0.66
SEMA6A-201ENST00000257414 TLR10Q9BXR5 811 aa10.93□□□□□ -0.66
SEMA6A-201ENST00000257414 PACSIN1Q9BY11 444 aa10.93□□□□□ -0.66
SEMA6A-201ENST00000257414 ACTR5Q9H9F9 607 aaPredicted RBP10.93□□□□□ -0.66
SEMA6A-201ENST00000257414 UBE2TQ9NPD8 197 aaPredicted RBP10.93□□□□□ -0.66
SEMA6A-201ENST00000257414 EXOC7Q9UPT5 735 aa10.93□□□□□ -0.66
SEMA6A-201ENST00000257414 USTQ9Y2C2 406 aa10.93□□□□□ -0.66
SEMA6A-201ENST00000257414 DAGLAQ9Y4D2 1042 aa10.93□□□□□ -0.66
SEMA6A-201ENST00000257414 SPATA31A1Q5TZJ5 1347 aa10.93□□□□□ -0.66
SEMA6A-201ENST00000257414 UBAP1LF5GYI3 381 aa10.93□□□□□ -0.66
SEMA6A-201ENST00000257414 BACH1O14867 736 aa10.93□□□□□ -0.66
SEMA6A-201ENST00000257414 EPHB6O15197 1021 aa10.93□□□□□ -0.66
SEMA6A-201ENST00000257414 SMARCA1P28370 1054 aa10.93□□□□□ -0.66
SEMA6A-201ENST00000257414 CLNS1AP54105 237 aaKnown RBP10.93□□□□□ -0.66
SEMA6A-201ENST00000257414 ARMC9Q7Z3E5 817 aa10.93□□□□□ -0.66
SEMA6A-201ENST00000257414 C4orf32Q8N8J7 132 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms