RNA–Protein interactions for RNA: ENST00000254193.10

SNRPA1-201, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPA1, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-201ENST00000254193 SFNP31947 248 aa20.26■□□□□ 0.83
SNRPA1-201ENST00000254193 SMAD3P84022 425 aaKnown RBP20.26■□□□□ 0.83
SNRPA1-201ENST00000254193 UGCGQ16739 394 aa20.26■□□□□ 0.83
SNRPA1-201ENST00000254193 DNAJB3Q8WWF6 145 aa20.26■□□□□ 0.83
SNRPA1-201ENST00000254193 OSBPL7Q9BZF2 842 aa20.26■□□□□ 0.83
SNRPA1-201ENST00000254193 FAM49AQ9H0Q0 323 aaPredicted RBP20.26■□□□□ 0.83
SNRPA1-201ENST00000254193 LAMA3Q16787 3333 aa20.25■□□□□ 0.83
SNRPA1-201ENST00000254193 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.25■□□□□ 0.83
SNRPA1-201ENST00000254193 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.25■□□□□ 0.83
SNRPA1-201ENST00000254193 ZNF862O60290 1169 aa20.25■□□□□ 0.83
SNRPA1-201ENST00000254193 CAND2O75155 1236 aa20.25■□□□□ 0.83
SNRPA1-201ENST00000254193 CXCL10P02778 98 aa20.25■□□□□ 0.83
SNRPA1-201ENST00000254193 ACTN1P12814 892 aa20.25■□□□□ 0.83
SNRPA1-201ENST00000254193 FOXP1Q9H334 677 aaPredicted RBP20.25■□□□□ 0.83
SNRPA1-201ENST00000254193 VAV3Q9UKW4 847 aa20.25■□□□□ 0.83
SNRPA1-201ENST00000254193 IGSF9BQ9UPX0 1349 aa20.25■□□□□ 0.83
SNRPA1-201ENST00000254193 ZBTB42B2RXF5 422 aa20.24■□□□□ 0.83
SNRPA1-201ENST00000254193 KIF28PB7ZC32 967 aa20.24■□□□□ 0.83
SNRPA1-201ENST00000254193 EML1O00423 815 aa20.24■□□□□ 0.83
SNRPA1-201ENST00000254193 TBX3O15119 743 aa20.24■□□□□ 0.83
SNRPA1-201ENST00000254193 GNL2Q13823 731 aaKnown RBP20.24■□□□□ 0.83
SNRPA1-201ENST00000254193 TCTN1Q2MV58 587 aa20.24■□□□□ 0.83
SNRPA1-201ENST00000254193 MTHFD1LQ6UB35 978 aa20.24■□□□□ 0.83
SNRPA1-201ENST00000254193 RPAINQ86UA6 219 aa20.24■□□□□ 0.83
SNRPA1-201ENST00000254193 RDM1Q8NG50 284 aa20.24■□□□□ 0.83
SNRPA1-201ENST00000254193 BBXQ8WY36 941 aaPredicted RBP20.24■□□□□ 0.83
SNRPA1-201ENST00000254193 SLC4A7Q9Y6M7 1214 aa20.24■□□□□ 0.83
SNRPA1-201ENST00000254193 CHRNA1P02708 482 aa20.23■□□□□ 0.83
SNRPA1-201ENST00000254193 KLRC1P26715 233 aa20.23■□□□□ 0.83
SNRPA1-201ENST00000254193 GJB2P29033 226 aa20.23■□□□□ 0.83
SNRPA1-201ENST00000254193 PRKCEQ02156 737 aa20.23■□□□□ 0.83
SNRPA1-201ENST00000254193 PPP2R5CQ13362 524 aa20.23■□□□□ 0.83
SNRPA1-201ENST00000254193 ZNF484Q5JVG2 852 aa20.23■□□□□ 0.83
SNRPA1-201ENST00000254193 FAM26DQ5JW98 314 aa20.23■□□□□ 0.83
SNRPA1-201ENST00000254193 GPR153Q6NV75 609 aa20.23■□□□□ 0.83
SNRPA1-201ENST00000254193 Q7L0L9 218 aa20.23■□□□□ 0.83
SNRPA1-201ENST00000254193 RSPH3Q86UC2 560 aa20.23■□□□□ 0.83
SNRPA1-201ENST00000254193 KIF3AQ9Y496 699 aa20.23■□□□□ 0.83
SNRPA1-201ENST00000254193 PCDHA2Q9Y5H9 948 aa20.23■□□□□ 0.83
SNRPA1-201ENST00000254193 NEMFO60524 1076 aa20.22■□□□□ 0.83
SNRPA1-201ENST00000254193 BAG4O95429 457 aaKnown RBP20.22■□□□□ 0.83
SNRPA1-201ENST00000254193 OATP04181 439 aa20.22■□□□□ 0.83
SNRPA1-201ENST00000254193 MCM7P33993 719 aa20.22■□□□□ 0.83
SNRPA1-201ENST00000254193 CALCRLQ16602 461 aa20.22■□□□□ 0.83
SNRPA1-201ENST00000254193 CNKSR3Q6P9H4 555 aa20.22■□□□□ 0.83
SNRPA1-201ENST00000254193 NOSTRINQ8IVI9 506 aa20.22■□□□□ 0.83
SNRPA1-201ENST00000254193 BANK1Q8NDB2 785 aa20.22■□□□□ 0.83
SNRPA1-201ENST00000254193 FAM167AQ96KS9 214 aa20.22■□□□□ 0.83
SNRPA1-201ENST00000254193 NRBP2Q9NSY0 501 aa20.22■□□□□ 0.83
SNRPA1-201ENST00000254193 SMC3Q9UQE7 1217 aa20.22■□□□□ 0.83
SNRPA1-201ENST00000254193 COL1A2P08123 1366 aa20.21■□□□□ 0.83
SNRPA1-201ENST00000254193 PBX2P40425 430 aa20.21■□□□□ 0.83
SNRPA1-201ENST00000254193 TMEM62Q0P6H9 643 aa20.21■□□□□ 0.83
SNRPA1-201ENST00000254193 ZNF174Q15697 407 aa20.21■□□□□ 0.83
SNRPA1-201ENST00000254193 SLFN12Q8IYM2 578 aa20.21■□□□□ 0.83
SNRPA1-201ENST00000254193 DEFB123Q8N688 67 aa20.21■□□□□ 0.83
SNRPA1-201ENST00000254193 DBF4BQ8NFT6 615 aa20.21■□□□□ 0.83
SNRPA1-201ENST00000254193 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.21■□□□□ 0.83
SNRPA1-201ENST00000254193 SMIM35A0A1B0GVV1 85 aa20.2■□□□□ 0.82
SNRPA1-201ENST00000254193 BAIAP3O94812 1187 aa20.2■□□□□ 0.82
SNRPA1-201ENST00000254193 SLC34A2O95436 690 aa20.2■□□□□ 0.82
SNRPA1-201ENST00000254193 C22orf31O95567 290 aa20.2■□□□□ 0.82
SNRPA1-201ENST00000254193 ATP2A2P16615 1042 aaKnown RBP20.2■□□□□ 0.82
SNRPA1-201ENST00000254193 U2AF2P26368 475 aaKnown RBP eCLIP20.2■□□□□ 0.822e-7■■■□□ 14.8
SNRPA1-201ENST00000254193 RABGGTBP53611 331 aa20.2■□□□□ 0.82
SNRPA1-201ENST00000254193 MRPS6P82932 125 aaKnown RBP20.2■□□□□ 0.82
SNRPA1-201ENST00000254193 SPIRE1Q08AE8 756 aa20.2■□□□□ 0.82
SNRPA1-201ENST00000254193 MGAT3Q09327 533 aa20.2■□□□□ 0.82
SNRPA1-201ENST00000254193 PLEKHG4Q58EX7 1191 aa20.2■□□□□ 0.82
SNRPA1-201ENST00000254193 NCAPH2Q6IBW4 605 aa20.2■□□□□ 0.82
SNRPA1-201ENST00000254193 KIAA0319LQ8IZA0 1049 aa20.2■□□□□ 0.82
SNRPA1-201ENST00000254193 MTMR9Q96QG7 549 aa20.2■□□□□ 0.82
SNRPA1-201ENST00000254193 PBX4Q9BYU1 374 aa20.2■□□□□ 0.82
SNRPA1-201ENST00000254193 TMEM60Q9H2L4 133 aa20.2■□□□□ 0.82
SNRPA1-201ENST00000254193 CDY2AQ9Y6F7 541 aa20.2■□□□□ 0.82
SNRPA1-201ENST00000254193 TMEM150BA6NC51 233 aa20.19■□□□□ 0.82
SNRPA1-201ENST00000254193 STBD1O95210 358 aa20.19■□□□□ 0.82
SNRPA1-201ENST00000254193 GHRP10912 638 aa20.19■□□□□ 0.82
SNRPA1-201ENST00000254193 DNAJB2P25686 324 aa20.19■□□□□ 0.82
SNRPA1-201ENST00000254193 TXKP42681 527 aa20.19■□□□□ 0.82
SNRPA1-201ENST00000254193 PSMC5P62195 406 aa20.19■□□□□ 0.82
SNRPA1-201ENST00000254193 CUL4AQ13619 759 aa20.19■□□□□ 0.82
SNRPA1-201ENST00000254193 IKBKEQ14164 716 aa20.19■□□□□ 0.82
SNRPA1-201ENST00000254193 MCTP1Q6DN14 999 aa20.19■□□□□ 0.82
SNRPA1-201ENST00000254193 METTL13Q8N6R0 699 aa20.19■□□□□ 0.82
SNRPA1-201ENST00000254193 FAM161BQ96MY7 647 aa20.19■□□□□ 0.82
SNRPA1-201ENST00000254193 PCDHA12Q9UN75 941 aa20.19■□□□□ 0.82
SNRPA1-201ENST00000254193 CEP131Q9UPN4 1083 aa20.19■□□□□ 0.82
SNRPA1-201ENST00000254193 ABHD14A-ACY1A0A1B0GW23 586 aa20.18■□□□□ 0.82
SNRPA1-201ENST00000254193 DDX11L8A8MPP1 907 aa20.18■□□□□ 0.82
SNRPA1-201ENST00000254193 RPLP2P05387 115 aaKnown RBP20.18■□□□□ 0.82
SNRPA1-201ENST00000254193 WDR5P61964 334 aaKnown RBP20.18■□□□□ 0.82
SNRPA1-201ENST00000254193 NBR1Q14596 966 aa20.18■□□□□ 0.82
SNRPA1-201ENST00000254193 LPIN1Q14693 890 aa20.18■□□□□ 0.82
SNRPA1-201ENST00000254193 EPHA7Q15375 998 aa20.18■□□□□ 0.82
SNRPA1-201ENST00000254193 XKR3Q5GH77 459 aa20.18■□□□□ 0.82
SNRPA1-201ENST00000254193 TTC38Q5R3I4 469 aa20.18■□□□□ 0.82
SNRPA1-201ENST00000254193 IER5Q5VY09 327 aa20.18■□□□□ 0.82
SNRPA1-201ENST00000254193 NME8Q8N427 588 aa20.18■□□□□ 0.82
SNRPA1-201ENST00000254193 SEPT8Q92599 483 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms