RNA–Protein interactions for RNA: ENST00000252542.8

SAFB2-201, Transcript of scaffold attachment factor B2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAFB2, Length 3,371 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAFB2-201ENST00000252542 WDR18Q9BV38 432 aa16.5■□□□□ 0.23
SAFB2-201ENST00000252542 TRIM31Q9BZY9 425 aa16.5■□□□□ 0.23
SAFB2-201ENST00000252542 WNT10BO00744 389 aa16.49■□□□□ 0.23
SAFB2-201ENST00000252542 GIT2Q14161 759 aa16.49■□□□□ 0.23
SAFB2-201ENST00000252542 LXNQ9BS40 222 aa16.49■□□□□ 0.23
SAFB2-201ENST00000252542 GCNT4Q9P109 453 aa16.49■□□□□ 0.23
SAFB2-201ENST00000252542 ATP8B1O43520 1251 aa16.49■□□□□ 0.23
SAFB2-201ENST00000252542 AKAP3O75969 853 aa16.49■□□□□ 0.23
SAFB2-201ENST00000252542 VAV2P52735 878 aa16.49■□□□□ 0.23
SAFB2-201ENST00000252542 HLTFQ14527 1009 aaKnown RBP eCLIP16.49■□□□□ 0.235e-7■□□□□ 8.9
SAFB2-201ENST00000252542 LRRC55Q6ZSA7 311 aa16.49■□□□□ 0.23
SAFB2-201ENST00000252542 RSRC2Q7L4I2 434 aaKnown RBP16.49■□□□□ 0.23
SAFB2-201ENST00000252542 CCDC88AQ3V6T2 1871 aa16.49■□□□□ 0.23
SAFB2-201ENST00000252542 PPP1R12BO60237 982 aaPredicted RBP16.49■□□□□ 0.23
SAFB2-201ENST00000252542 FOSP01100 380 aaPredicted RBP16.49■□□□□ 0.23
SAFB2-201ENST00000252542 NR3C1P04150 777 aa16.49■□□□□ 0.23
SAFB2-201ENST00000252542 NPEPPSP55786 919 aa16.49■□□□□ 0.23
SAFB2-201ENST00000252542 FAM102BQ5T8I3 360 aa16.49■□□□□ 0.23
SAFB2-201ENST00000252542 TTC19Q6DKK2 380 aaPredicted RBP16.49■□□□□ 0.23
SAFB2-201ENST00000252542 STYK1Q6J9G0 422 aa16.49■□□□□ 0.23
SAFB2-201ENST00000252542 PPP1R18Q6NYC8 613 aa16.49■□□□□ 0.23
SAFB2-201ENST00000252542 IL31RAQ8NI17 732 aa16.49■□□□□ 0.23
SAFB2-201ENST00000252542 EXOC4Q96A65 974 aa16.49■□□□□ 0.23
SAFB2-201ENST00000252542 ZNF668Q96K58 619 aaPredicted RBP16.49■□□□□ 0.23
SAFB2-201ENST00000252542 SPATA31C1P0DKV0 1188 aa16.48■□□□□ 0.23
SAFB2-201ENST00000252542 KCNMA1Q12791 1236 aa16.48■□□□□ 0.23
SAFB2-201ENST00000252542 BRD3Q15059 726 aa16.48■□□□□ 0.23
SAFB2-201ENST00000252542 KNOP1Q1ED39 458 aaKnown RBP16.48■□□□□ 0.23
SAFB2-201ENST00000252542 TMEM119Q4V9L6 283 aa16.48■□□□□ 0.23
SAFB2-201ENST00000252542 CEP55Q53EZ4 464 aa16.48■□□□□ 0.23
SAFB2-201ENST00000252542 PLA2G4FQ68DD2 849 aa16.48■□□□□ 0.23
SAFB2-201ENST00000252542 CIAPIN1Q6FI81 312 aa16.48■□□□□ 0.23
SAFB2-201ENST00000252542 MRPL11Q9Y3B7 192 aaKnown RBP16.48■□□□□ 0.23
SAFB2-201ENST00000252542 A0A087X0T9 212 aa16.48■□□□□ 0.23
SAFB2-201ENST00000252542 PDE2AO00408 941 aaPredicted RBP16.48■□□□□ 0.23
SAFB2-201ENST00000252542 BACH1O14867 736 aa16.48■□□□□ 0.23
SAFB2-201ENST00000252542 FAM228BP0C875 321 aa16.48■□□□□ 0.23
SAFB2-201ENST00000252542 GUCY2FP51841 1108 aa16.48■□□□□ 0.23
SAFB2-201ENST00000252542 AP3B2Q13367 1082 aa16.48■□□□□ 0.23
SAFB2-201ENST00000252542 HDAC7Q8WUI4 952 aa16.48■□□□□ 0.23
SAFB2-201ENST00000252542 TAF4BQ92750 862 aa16.48■□□□□ 0.23
SAFB2-201ENST00000252542 EHD4Q9H223 541 aa16.48■□□□□ 0.23
SAFB2-201ENST00000252542 ANKZF1Q9H8Y5 726 aa16.48■□□□□ 0.23
SAFB2-201ENST00000252542 PALMO75781 387 aa16.47■□□□□ 0.23
SAFB2-201ENST00000252542 GLT8D2Q9H1C3 349 aa16.47■□□□□ 0.23
SAFB2-201ENST00000252542 SALL4Q9UJQ4 1053 aa16.47■□□□□ 0.23
SAFB2-201ENST00000252542 KCNK3O14649 394 aa16.47■□□□□ 0.23
SAFB2-201ENST00000252542 CLK2P49760 499 aaKnown RBP16.47■□□□□ 0.23
SAFB2-201ENST00000252542 TNIP1Q15025 636 aa16.47■□□□□ 0.23
SAFB2-201ENST00000252542 ZNF746Q6NUN9 644 aaPredicted RBP16.47■□□□□ 0.23
SAFB2-201ENST00000252542 SND1Q7KZF4 910 aaKnown RBP eCLIP16.47■□□□□ 0.23
SAFB2-201ENST00000252542 FAM186BQ8IYM0 893 aa16.47■□□□□ 0.23
SAFB2-201ENST00000252542 EHBP1Q8NDI1 1231 aa16.47■□□□□ 0.23
SAFB2-201ENST00000252542 NOX5Q96PH1 765 aa16.47■□□□□ 0.23
SAFB2-201ENST00000252542 PPP1R2P41236 205 aa16.47■□□□□ 0.23
SAFB2-201ENST00000252542 XKR9Q5GH70 373 aa16.47■□□□□ 0.23
SAFB2-201ENST00000252542 RINT1Q6NUQ1 792 aa16.47■□□□□ 0.23
SAFB2-201ENST00000252542 TATDN1Q6P1N9 297 aa16.47■□□□□ 0.23
SAFB2-201ENST00000252542 FAM151AQ8WW52 585 aa16.47■□□□□ 0.23
SAFB2-201ENST00000252542 MTMR8Q96EF0 704 aa16.47■□□□□ 0.23
SAFB2-201ENST00000252542 VCPKMTQ9H867 229 aa16.47■□□□□ 0.23
SAFB2-201ENST00000252542 ECM29Q5VYK3 1845 aa16.47■□□□□ 0.23
SAFB2-201ENST00000252542 SMCHD1A6NHR9 2005 aa16.46■□□□□ 0.23
SAFB2-201ENST00000252542 CALUO43852 315 aaPredicted RBP16.46■□□□□ 0.23
SAFB2-201ENST00000252542 CEP104O60308 925 aa16.46■□□□□ 0.23
SAFB2-201ENST00000252542 ENTPD3O75355 529 aa16.46■□□□□ 0.23
SAFB2-201ENST00000252542 KLRC1P26715 233 aa16.46■□□□□ 0.23
SAFB2-201ENST00000252542 RPA1P27694 616 aa16.46■□□□□ 0.23
SAFB2-201ENST00000252542 BAG6P46379 1132 aa16.46■□□□□ 0.23
SAFB2-201ENST00000252542 CASP8Q14790 479 aa16.46■□□□□ 0.23
SAFB2-201ENST00000252542 NBPF12Q5TAG4 269 aaPredicted RBP16.46■□□□□ 0.23
SAFB2-201ENST00000252542 IPO4Q8TEX9 1081 aaKnown RBP16.46■□□□□ 0.23
SAFB2-201ENST00000252542 BICD1Q96G01 975 aa16.46■□□□□ 0.23
SAFB2-201ENST00000252542 UNC45AQ9H3U1 944 aa16.46■□□□□ 0.23
SAFB2-201ENST00000252542 KCNMB3Q9NPA1 279 aa16.46■□□□□ 0.23
SAFB2-201ENST00000252542 OPLAHO14841 1288 aa16.46■□□□□ 0.23
SAFB2-201ENST00000252542 RPL13P26373 211 aaKnown RBP16.46■□□□□ 0.23
SAFB2-201ENST00000252542 PEX3P56589 373 aa16.46■□□□□ 0.23
SAFB2-201ENST00000252542 SF3A3Q12874 501 aaKnown RBP eCLIP16.46■□□□□ 0.232e-6■■■□□ 17.7
SAFB2-201ENST00000252542 WHAMMP3Q1A5X7 153 aa16.46■□□□□ 0.23
SAFB2-201ENST00000252542 PDXDC1Q6P996 788 aa16.46■□□□□ 0.23
SAFB2-201ENST00000252542 ERGIC2Q96RQ1 377 aa16.46■□□□□ 0.23
SAFB2-201ENST00000252542 TEKT3Q9BXF9 490 aa16.46■□□□□ 0.23
SAFB2-201ENST00000252542 FAM204AQ9H8W3 233 aa16.46■□□□□ 0.23
SAFB2-201ENST00000252542 PARVGQ9HBI0 331 aa16.46■□□□□ 0.23
SAFB2-201ENST00000252542 ZNRF3Q9ULT6 936 aa16.46■□□□□ 0.23
SAFB2-201ENST00000252542 PLAGL2Q9UPG8 496 aa16.46■□□□□ 0.23
SAFB2-201ENST00000252542 SIK3Q9Y2K2 1263 aa16.46■□□□□ 0.23
SAFB2-201ENST00000252542 FRMD4BQ9Y2L6 1034 aa16.46■□□□□ 0.23
SAFB2-201ENST00000252542 ZHX2Q9Y6X8 837 aa16.46■□□□□ 0.23
SAFB2-201ENST00000252542 AFPP02771 609 aaKnown RBP16.46■□□□□ 0.22
SAFB2-201ENST00000252542 SSTR3P32745 418 aaPredicted RBP16.46■□□□□ 0.22
SAFB2-201ENST00000252542 HMGCS2P54868 508 aa16.46■□□□□ 0.22
SAFB2-201ENST00000252542 SLC12A3P55017 1021 aa16.46■□□□□ 0.22
SAFB2-201ENST00000252542 ARHGEF16Q5VV41 709 aa16.46■□□□□ 0.22
SAFB2-201ENST00000252542 TAAR1Q96RJ0 339 aa16.46■□□□□ 0.22
SAFB2-201ENST00000252542 AP1M1Q9BXS5 423 aa16.46■□□□□ 0.22
SAFB2-201ENST00000252542 EIF3CLB5ME19 914 aaKnown RBP16.45■□□□□ 0.22
SAFB2-201ENST00000252542 SLITRK3O94933 977 aa16.45■□□□□ 0.22
SAFB2-201ENST00000252542 ASNSP08243 561 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms