RNA–Protein interactions for RNA: ENST00000251739.9

VPS50-201, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS50, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-201ENST00000251739 FANCBQ8NB91 859 aa11.83□□□□□ -0.52
VPS50-201ENST00000251739 PCYT2Q99447 389 aa11.83□□□□□ -0.52
VPS50-201ENST00000251739 C1QTNF1Q9BXJ1 281 aa11.83□□□□□ -0.52
VPS50-201ENST00000251739 CD320Q9NPF0 282 aa11.83□□□□□ -0.52
VPS50-201ENST00000251739 JADE2Q9NQC1 790 aa11.83□□□□□ -0.52
VPS50-201ENST00000251739 ERAP1Q9NZ08 941 aa11.83□□□□□ -0.52
VPS50-201ENST00000251739 C5orf67F2Z3F1 127 aa11.82□□□□□ -0.52
VPS50-201ENST00000251739 MAFGO15525 162 aa11.82□□□□□ -0.52
VPS50-201ENST00000251739 PPFIA1Q13136 1202 aa11.82□□□□□ -0.52
VPS50-201ENST00000251739 MTMR1Q13613 665 aa11.82□□□□□ -0.52
VPS50-201ENST00000251739 LPIN1Q14693 890 aa11.82□□□□□ -0.52
VPS50-201ENST00000251739 GRIK4Q16099 956 aa11.82□□□□□ -0.52
VPS50-201ENST00000251739 LEXMQ3ZCV2 418 aa11.82□□□□□ -0.52
VPS50-201ENST00000251739 TIGD5Q53EQ6 642 aa11.82□□□□□ -0.52
VPS50-201ENST00000251739 FBXO47Q5MNV8 452 aa11.82□□□□□ -0.52
VPS50-201ENST00000251739 WWC2Q6AWC2 1192 aa11.82□□□□□ -0.52
VPS50-201ENST00000251739 MICU3Q86XE3 530 aa11.82□□□□□ -0.52
VPS50-201ENST00000251739 RAB11FIP4Q86YS3 637 aa11.82□□□□□ -0.52
VPS50-201ENST00000251739 TMEM192Q8IY95 271 aa11.82□□□□□ -0.52
VPS50-201ENST00000251739 CRIPAKQ8N1N5 446 aa11.82□□□□□ -0.52
VPS50-201ENST00000251739 LINC01599Q8WXQ3 324 aa11.82□□□□□ -0.52
VPS50-201ENST00000251739 SEPT1Q8WYJ6 367 aa11.82□□□□□ -0.52
VPS50-201ENST00000251739 YME1L1Q96TA2 773 aa11.82□□□□□ -0.52
VPS50-201ENST00000251739 LRRC2Q9BYS8 371 aa11.82□□□□□ -0.52
VPS50-201ENST00000251739 C11orf16Q9NQ32 467 aa11.82□□□□□ -0.52
VPS50-201ENST00000251739 TUBE1Q9UJT0 475 aa11.82□□□□□ -0.52
VPS50-201ENST00000251739 PCDHA6Q9UN73 950 aa11.82□□□□□ -0.52
VPS50-201ENST00000251739 PCDHA8Q9Y5H6 950 aa11.82□□□□□ -0.52
VPS50-201ENST00000251739 SLC12A7Q9Y666 1083 aa11.82□□□□□ -0.52
VPS50-201ENST00000251739 ZNF318Q5VUA4 2279 aa11.82□□□□□ -0.52
VPS50-201ENST00000251739 FNDC1Q4ZHG4 1894 aaPredicted RBP11.82□□□□□ -0.52
VPS50-201ENST00000251739 SPDYE3A6NKU9 549 aa11.81□□□□□ -0.52
VPS50-201ENST00000251739 GHRP10912 638 aa11.81□□□□□ -0.52
VPS50-201ENST00000251739 EXOSC10Q01780 885 aaKnown RBP11.81□□□□□ -0.52
VPS50-201ENST00000251739 BMP2KLQ5H9B9 411 aa11.81□□□□□ -0.52
VPS50-201ENST00000251739 PPP1R18Q6NYC8 613 aa11.81□□□□□ -0.52
VPS50-201ENST00000251739 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.81□□□□□ -0.52
VPS50-201ENST00000251739 NEK9Q8TD19 979 aa11.81□□□□□ -0.52
VPS50-201ENST00000251739 KCNK17Q96T54 332 aa11.81□□□□□ -0.52
VPS50-201ENST00000251739 SMARCAD1Q9H4L7 1026 aa11.81□□□□□ -0.52
VPS50-201ENST00000251739 EPHX3Q9H6B9 360 aa11.81□□□□□ -0.52
VPS50-201ENST00000251739 CDHR5Q9HBB8 845 aa11.81□□□□□ -0.52
VPS50-201ENST00000251739 JPH1Q9HDC5 661 aaPredicted RBP11.81□□□□□ -0.52
VPS50-201ENST00000251739 ANO2Q9NQ90 1003 aa11.81□□□□□ -0.52
VPS50-201ENST00000251739 KCNH7Q9NS40 1196 aa11.81□□□□□ -0.52
VPS50-201ENST00000251739 NFASCO94856 1347 aa11.81□□□□□ -0.52
VPS50-201ENST00000251739 ADGRA3Q8IWK6 1321 aa11.81□□□□□ -0.52
VPS50-201ENST00000251739 PLXNA4Q9HCM2 1894 aa11.8□□□□□ -0.52
VPS50-201ENST00000251739 PPP1R3GB7ZBB8 358 aa11.8□□□□□ -0.52
VPS50-201ENST00000251739 UPP2O95045 317 aa11.8□□□□□ -0.52
VPS50-201ENST00000251739 KCNA5P22460 613 aa11.8□□□□□ -0.52
VPS50-201ENST00000251739 MARK3P27448 753 aa11.8□□□□□ -0.52
VPS50-201ENST00000251739 ITGB3BPQ13352 177 aaPredicted RBP11.8□□□□□ -0.52
VPS50-201ENST00000251739 GPM6BQ13491 265 aa11.8□□□□□ -0.52
VPS50-201ENST00000251739 PTPROQ16827 1216 aa11.8□□□□□ -0.52
VPS50-201ENST00000251739 TSGA10IPQ3SY00 556 aa11.8□□□□□ -0.52
VPS50-201ENST00000251739 TSHZ1Q6ZSZ6 1077 aa11.8□□□□□ -0.52
VPS50-201ENST00000251739 HEATR3Q7Z4Q2 680 aa11.8□□□□□ -0.52
VPS50-201ENST00000251739 FAM178BQ8IXR5 827 aa11.8□□□□□ -0.52
VPS50-201ENST00000251739 CYP2W1Q8TAV3 490 aa11.8□□□□□ -0.52
VPS50-201ENST00000251739 CLP1Q92989 425 aaKnown RBP11.8□□□□□ -0.52
VPS50-201ENST00000251739 ZNF689Q96CS4 500 aaPredicted RBP11.8□□□□□ -0.52
VPS50-201ENST00000251739 MXRA8Q9BRK3 442 aa11.8□□□□□ -0.52
VPS50-201ENST00000251739 RIC8AQ9NPQ8 531 aa11.8□□□□□ -0.52
VPS50-201ENST00000251739 FAM217BQ9NTX9 383 aaPredicted RBP11.8□□□□□ -0.52
VPS50-201ENST00000251739 PKD2L1Q9P0L9 805 aa11.8□□□□□ -0.52
VPS50-201ENST00000251739 BRPF3Q9ULD4 1205 aa11.8□□□□□ -0.52
VPS50-201ENST00000251739 SQORQ9Y6N5 450 aa11.8□□□□□ -0.52
VPS50-201ENST00000251739 RRN3P2A6NIE6 340 aa11.79□□□□□ -0.52
VPS50-201ENST00000251739 hCG_1984214I3L0E3 225 aa11.79□□□□□ -0.52
VPS50-201ENST00000251739 STXBP3O00186 592 aa11.79□□□□□ -0.52
VPS50-201ENST00000251739 MEIS1O00470 390 aa11.79□□□□□ -0.52
VPS50-201ENST00000251739 RPLP2P05387 115 aaKnown RBP11.79□□□□□ -0.52
VPS50-201ENST00000251739 INSRRP14616 1297 aa11.79□□□□□ -0.52
VPS50-201ENST00000251739 SREBF1P36956 1147 aa11.79□□□□□ -0.52
VPS50-201ENST00000251739 CLK2P49760 499 aaKnown RBP11.79□□□□□ -0.52
VPS50-201ENST00000251739 RCAN1P53805 252 aa11.79□□□□□ -0.52
VPS50-201ENST00000251739 MRPS6P82932 125 aaKnown RBP11.79□□□□□ -0.52
VPS50-201ENST00000251739 CEP55Q53EZ4 464 aa11.79□□□□□ -0.52
VPS50-201ENST00000251739 TCEAL5Q5H9L2 206 aa11.79□□□□□ -0.52
VPS50-201ENST00000251739 RSPH3Q86UC2 560 aa11.79□□□□□ -0.52
VPS50-201ENST00000251739 CCDC82Q8N4S0 544 aa11.79□□□□□ -0.52
VPS50-201ENST00000251739 ZNF713Q8N859 430 aaPredicted RBP11.79□□□□□ -0.52
VPS50-201ENST00000251739 BANK1Q8NDB2 785 aa11.79□□□□□ -0.52
VPS50-201ENST00000251739 DNAJB3Q8WWF6 145 aa11.79□□□□□ -0.52
VPS50-201ENST00000251739 CRYGNQ8WXF5 182 aa11.79□□□□□ -0.52
VPS50-201ENST00000251739 GLG1Q92896 1179 aa11.79□□□□□ -0.52
VPS50-201ENST00000251739 ZBTB10Q96DT7 871 aa11.79□□□□□ -0.52
VPS50-201ENST00000251739 PABPC5Q96DU9 382 aaKnown RBP11.79□□□□□ -0.52
VPS50-201ENST00000251739 IL17RAQ96F46 866 aa11.79□□□□□ -0.52
VPS50-201ENST00000251739 LRFN3Q9BTN0 628 aa11.79□□□□□ -0.52
VPS50-201ENST00000251739 ANO3Q9BYT9 981 aa11.79□□□□□ -0.52
VPS50-201ENST00000251739 AGO3Q9H9G7 860 aaKnown RBP11.79□□□□□ -0.52
VPS50-201ENST00000251739 NPDC1Q9NQX5 325 aaPredicted RBP11.79□□□□□ -0.52
VPS50-201ENST00000251739 RBM28Q9NW13 759 aaKnown RBP11.79□□□□□ -0.52
VPS50-201ENST00000251739 SLC9A2Q9UBY0 812 aa11.79□□□□□ -0.52
VPS50-201ENST00000251739 CDY2AQ9Y6F7 541 aa11.79□□□□□ -0.52
VPS50-201ENST00000251739 KDM3AQ9Y4C1 1321 aa11.79□□□□□ -0.52
VPS50-201ENST00000251739 NID2Q14112 1375 aa11.79□□□□□ -0.52
VPS50-201ENST00000251739 IGKV6D-21A0A0A0MT36 114 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms