RNA–Protein interactions for RNA: ENST00000250448.2

FOXA1-201, Transcript of forkhead box A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXA1, Length 2,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-201ENST00000250448 POTEDQ86YR6 584 aa18.67■□□□□ 0.58
FOXA1-201ENST00000250448 AMNQ9BXJ7 453 aa18.67■□□□□ 0.58
FOXA1-201ENST00000250448 NDST4Q9H3R1 872 aa18.67■□□□□ 0.58
FOXA1-201ENST00000250448 GRIN2DO15399 1336 aa18.67■□□□□ 0.58
FOXA1-201ENST00000250448 EIF3HO15372 352 aaKnown RBP eCLIP18.67■□□□□ 0.58
FOXA1-201ENST00000250448 HOXA13P31271 388 aaPredicted RBP18.67■□□□□ 0.58
FOXA1-201ENST00000250448 ICE2Q659A1 982 aa18.67■□□□□ 0.58
FOXA1-201ENST00000250448 TSEN2Q8NCE0 465 aaKnown RBP18.67■□□□□ 0.58
FOXA1-201ENST00000250448 PSMB7Q99436 277 aa18.67■□□□□ 0.58
FOXA1-201ENST00000250448 SLC39A2Q9NP94 309 aa18.67■□□□□ 0.58
FOXA1-201ENST00000250448 EHD2Q9NZN4 543 aa18.67■□□□□ 0.58
FOXA1-201ENST00000250448 SLC37A4O43826 429 aa18.66■□□□□ 0.58
FOXA1-201ENST00000250448 TNFRSF8P28908 595 aa18.66■□□□□ 0.58
FOXA1-201ENST00000250448 GNGT1P63211 74 aa18.66■□□□□ 0.58
FOXA1-201ENST00000250448 MTMR2Q13614 643 aa18.66■□□□□ 0.58
FOXA1-201ENST00000250448 MAN2A1Q16706 1144 aa18.66■□□□□ 0.58
FOXA1-201ENST00000250448 APOBEC3FQ8IUX4 373 aaKnown RBP18.66■□□□□ 0.58
FOXA1-201ENST00000250448 LRRC53A6NM62 1247 aa18.66■□□□□ 0.58
FOXA1-201ENST00000250448 ADM5C9JUS6 153 aa18.66■□□□□ 0.58
FOXA1-201ENST00000250448 EPB41P11171 864 aaKnown RBP18.66■□□□□ 0.58
FOXA1-201ENST00000250448 CXCR5P32302 372 aa18.66■□□□□ 0.58
FOXA1-201ENST00000250448 MRPL12P52815 198 aaKnown RBP18.66■□□□□ 0.58
FOXA1-201ENST00000250448 BTNL9Q6UXG8 535 aa18.66■□□□□ 0.58
FOXA1-201ENST00000250448 TBC1D5Q92609 795 aa18.66■□□□□ 0.58
FOXA1-201ENST00000250448 CAVIN3Q969G5 261 aa18.66■□□□□ 0.58
FOXA1-201ENST00000250448 RUFY1Q96T51 708 aa18.66■□□□□ 0.58
FOXA1-201ENST00000250448 MMRN2Q9H8L6 949 aa18.66■□□□□ 0.58
FOXA1-201ENST00000250448 EBAG9O00559 213 aa18.65■□□□□ 0.58
FOXA1-201ENST00000250448 PJA2O43164 708 aa18.65■□□□□ 0.58
FOXA1-201ENST00000250448 NCK2O43639 380 aa18.65■□□□□ 0.58
FOXA1-201ENST00000250448 CTNND1O60716 968 aaKnown RBP18.65■□□□□ 0.58
FOXA1-201ENST00000250448 PAFAH1B1P43034 410 aa18.65■□□□□ 0.58
FOXA1-201ENST00000250448 MAGEA1P43355 309 aa18.65■□□□□ 0.58
FOXA1-201ENST00000250448 SPP2Q13103 211 aa18.65■□□□□ 0.58
FOXA1-201ENST00000250448 GPR162Q16538 588 aa18.65■□□□□ 0.58
FOXA1-201ENST00000250448 ALS2CLQ60I27 953 aa18.65■□□□□ 0.58
FOXA1-201ENST00000250448 MMTAG2Q9BU76 263 aaKnown RBP18.65■□□□□ 0.58
FOXA1-201ENST00000250448 ABCB11O95342 1321 aa18.65■□□□□ 0.58
FOXA1-201ENST00000250448 HSF2BPO75031 334 aa18.65■□□□□ 0.58
FOXA1-201ENST00000250448 CLK2P49760 499 aaKnown RBP18.65■□□□□ 0.58
FOXA1-201ENST00000250448 PPP1R18Q6NYC8 613 aa18.65■□□□□ 0.58
FOXA1-201ENST00000250448 C8orf74Q6P047 294 aa18.65■□□□□ 0.58
FOXA1-201ENST00000250448 RRAGAQ7L523 313 aa18.65■□□□□ 0.58
FOXA1-201ENST00000250448 GPIHBP1Q8IV16 184 aa18.65■□□□□ 0.58
FOXA1-201ENST00000250448 CALML4Q96GE6 196 aa18.65■□□□□ 0.58
FOXA1-201ENST00000250448 MEIS2O14770 477 aa18.64■□□□□ 0.58
FOXA1-201ENST00000250448 OPLAHO14841 1288 aa18.64■□□□□ 0.58
FOXA1-201ENST00000250448 TECP42680 631 aa18.64■□□□□ 0.58
FOXA1-201ENST00000250448 BCAS4Q8TDM0 211 aa18.64■□□□□ 0.58
FOXA1-201ENST00000250448 TTMPQ5BVD1 217 aa18.64■□□□□ 0.57
FOXA1-201ENST00000250448 CCDC155Q8N6L0 562 aa18.64■□□□□ 0.57
FOXA1-201ENST00000250448 BAP1Q92560 729 aa18.64■□□□□ 0.57
FOXA1-201ENST00000250448 MYH7BA7E2Y1 1941 aa18.64■□□□□ 0.57
FOXA1-201ENST00000250448 TXKP42681 527 aa18.64■□□□□ 0.57
FOXA1-201ENST00000250448 PDXDC1Q6P996 788 aa18.64■□□□□ 0.57
FOXA1-201ENST00000250448 MICALL1Q8N3F8 863 aa18.64■□□□□ 0.57
FOXA1-201ENST00000250448 ARL8AQ96BM9 186 aa18.64■□□□□ 0.57
FOXA1-201ENST00000250448 TLR10Q9BXR5 811 aa18.64■□□□□ 0.57
FOXA1-201ENST00000250448 RBM12Q9NTZ6 932 aaKnown RBP18.64■□□□□ 0.57
FOXA1-201ENST00000250448 SALL4Q9UJQ4 1053 aa18.64■□□□□ 0.57
FOXA1-201ENST00000250448 FAM169AQ9Y6X4 670 aa18.64■□□□□ 0.57
FOXA1-201ENST00000250448 FGFR1OPO95684 399 aaKnown RBP18.63■□□□□ 0.57
FOXA1-201ENST00000250448 SKOR1P84550 965 aa18.63■□□□□ 0.57
FOXA1-201ENST00000250448 NNTQ13423 1086 aa18.63■□□□□ 0.57
FOXA1-201ENST00000250448 DCAF15Q66K64 600 aa18.63■□□□□ 0.57
FOXA1-201ENST00000250448 UNC13DQ70J99 1090 aa18.63■□□□□ 0.57
FOXA1-201ENST00000250448 SV2BQ7L1I2 683 aa18.63■□□□□ 0.57
FOXA1-201ENST00000250448 TANGO6Q9C0B7 1094 aa18.63■□□□□ 0.57
FOXA1-201ENST00000250448 SSC5DA1L4H1 1573 aa18.63■□□□□ 0.57
FOXA1-201ENST00000250448 ANKRD13CQ8N6S4 541 aa18.63■□□□□ 0.57
FOXA1-201ENST00000250448 NOX5Q96PH1 765 aa18.63■□□□□ 0.57
FOXA1-201ENST00000250448 RABEP2Q9H5N1 569 aa18.63■□□□□ 0.57
FOXA1-201ENST00000250448 GLE1Q53GS7 698 aaKnown RBP18.62■□□□□ 0.57
FOXA1-201ENST00000250448 EP400NLQ6ZTU2 488 aa18.62■□□□□ 0.57
FOXA1-201ENST00000250448 ADARB2Q9NS39 739 aaKnown RBP18.62■□□□□ 0.57
FOXA1-201ENST00000250448 ZHX2Q9Y6X8 837 aa18.62■□□□□ 0.57
FOXA1-201ENST00000250448 MYMKA6NI61 221 aa18.62■□□□□ 0.57
FOXA1-201ENST00000250448 GFPT1Q06210 699 aaPredicted RBP18.62■□□□□ 0.57
FOXA1-201ENST00000250448 GRB10Q13322 594 aa18.62■□□□□ 0.57
FOXA1-201ENST00000250448 ASTE1Q2TB18 679 aaPredicted RBP18.62■□□□□ 0.57
FOXA1-201ENST00000250448 KLHDC7AQ5VTJ3 777 aa18.62■□□□□ 0.57
FOXA1-201ENST00000250448 GUF1Q8N442 669 aaKnown RBP18.62■□□□□ 0.57
FOXA1-201ENST00000250448 CHURC1Q8WUH1 139 aa18.62■□□□□ 0.57
FOXA1-201ENST00000250448 AGBL1Q96MI9 1066 aa18.62■□□□□ 0.57
FOXA1-201ENST00000250448 ANO3Q9BYT9 981 aa18.62■□□□□ 0.57
FOXA1-201ENST00000250448 EMILIN3Q9NT22 766 aa18.62■□□□□ 0.57
FOXA1-201ENST00000250448 BLOC1S4Q9NUP1 217 aa18.62■□□□□ 0.57
FOXA1-201ENST00000250448 STK17AQ9UEE5 414 aa18.62■□□□□ 0.57
FOXA1-201ENST00000250448 TSKSQ9UJT2 592 aa18.62■□□□□ 0.57
FOXA1-201ENST00000250448 SYNPO2Q9UMS6 1093 aa18.62■□□□□ 0.57
FOXA1-201ENST00000250448 PVALEFA0A1B0GWK0 134 aa18.61■□□□□ 0.57
FOXA1-201ENST00000250448 CFBP00751 764 aa18.61■□□□□ 0.57
FOXA1-201ENST00000250448 GTF2A1P52655 376 aaPredicted RBP18.61■□□□□ 0.57
FOXA1-201ENST00000250448 SCYL3Q8IZE3 742 aa18.61■□□□□ 0.57
FOXA1-201ENST00000250448 CPXCR1Q8N123 301 aa18.61■□□□□ 0.57
FOXA1-201ENST00000250448 ZIM3Q96PE6 472 aa18.61■□□□□ 0.57
FOXA1-201ENST00000250448 SSU72P8A0A1W2PR75 194 aa18.61■□□□□ 0.57
FOXA1-201ENST00000250448 PTPRAP18433 802 aa18.61■□□□□ 0.57
FOXA1-201ENST00000250448 LRRC63Q05C16 580 aa18.61■□□□□ 0.57
FOXA1-201ENST00000250448 TTC19Q6DKK2 380 aaPredicted RBP18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms