RNA–Protein interactions for RNA: ENST00000249014.4

CDC42EP1-201, Transcript of CDC42 effector protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDC42EP1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-201ENST00000249014 SPATA4Q8NEY3 305 aa21.47■■□□□ 1.03
CDC42EP1-201ENST00000249014 HINFPQ9BQA5 517 aa21.47■■□□□ 1.03
CDC42EP1-201ENST00000249014 TYW1Q9NV66 732 aaKnown RBP21.47■■□□□ 1.03
CDC42EP1-201ENST00000249014 TMOD2Q9NZR1 351 aa21.47■■□□□ 1.03
CDC42EP1-201ENST00000249014 ZNF70Q9UC06 446 aaPredicted RBP21.47■■□□□ 1.03
CDC42EP1-201ENST00000249014 ZBTB21Q9ULJ3 1066 aa21.47■■□□□ 1.03
CDC42EP1-201ENST00000249014 CNTNAP1P78357 1384 aa21.47■■□□□ 1.03
CDC42EP1-201ENST00000249014 CHMP2AO43633 222 aa21.46■■□□□ 1.03
CDC42EP1-201ENST00000249014 TBCAO75347 108 aaKnown RBP21.46■■□□□ 1.03
CDC42EP1-201ENST00000249014 SLITRK3O94933 977 aa21.46■■□□□ 1.03
CDC42EP1-201ENST00000249014 NR3C1P04150 777 aa21.46■■□□□ 1.03
CDC42EP1-201ENST00000249014 ITIH3Q06033 890 aa21.46■■□□□ 1.03
CDC42EP1-201ENST00000249014 TXLNBQ8N3L3 684 aa21.46■■□□□ 1.03
CDC42EP1-201ENST00000249014 HDAC7Q8WUI4 952 aa21.46■■□□□ 1.03
CDC42EP1-201ENST00000249014 DYDC2Q96IM9 177 aa21.46■■□□□ 1.03
CDC42EP1-201ENST00000249014 ZFP91Q96JP5 570 aaPredicted RBP21.46■■□□□ 1.03
CDC42EP1-201ENST00000249014 IKZF4Q9H2S9 585 aa21.46■■□□□ 1.03
CDC42EP1-201ENST00000249014 GOPCQ9HD26 462 aa21.46■■□□□ 1.03
CDC42EP1-201ENST00000249014 VPS18Q9P253 973 aa21.46■■□□□ 1.03
CDC42EP1-201ENST00000249014 ADAMTS1Q9UHI8 967 aa21.46■■□□□ 1.03
CDC42EP1-201ENST00000249014 RAD17O75943 681 aa21.46■■□□□ 1.03
CDC42EP1-201ENST00000249014 AFPP02771 609 aaKnown RBP21.46■■□□□ 1.03
CDC42EP1-201ENST00000249014 KLRC1P26715 233 aa21.46■■□□□ 1.03
CDC42EP1-201ENST00000249014 NAP1L1P55209 391 aaKnown RBP21.46■■□□□ 1.03
CDC42EP1-201ENST00000249014 ASIC2Q16515 512 aa21.46■■□□□ 1.03
CDC42EP1-201ENST00000249014 LRCH2Q5VUJ6 765 aa21.46■■□□□ 1.03
CDC42EP1-201ENST00000249014 RSBN1LQ6PCB5 846 aaPredicted RBP21.46■■□□□ 1.03
CDC42EP1-201ENST00000249014 CCNI2Q6ZMN8 369 aaPredicted RBP21.46■■□□□ 1.03
CDC42EP1-201ENST00000249014 TPH2Q8IWU9 490 aa21.46■■□□□ 1.03
CDC42EP1-201ENST00000249014 FAM151AQ8WW52 585 aa21.46■■□□□ 1.03
CDC42EP1-201ENST00000249014 GDAP1L1Q96MZ0 367 aa21.46■■□□□ 1.03
CDC42EP1-201ENST00000249014 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP21.46■■□□□ 1.03
CDC42EP1-201ENST00000249014 PACSIN1Q9BY11 444 aa21.46■■□□□ 1.03
CDC42EP1-201ENST00000249014 RANBP17Q9H2T7 1088 aaKnown RBP21.46■■□□□ 1.03
CDC42EP1-201ENST00000249014 GCOM1H8Y6P7 765 aaPredicted RBP21.45■■□□□ 1.02
CDC42EP1-201ENST00000249014 CLIC2O15247 247 aa21.45■■□□□ 1.02
CDC42EP1-201ENST00000249014 POLR2MP0CAP2 368 aa21.45■■□□□ 1.02
CDC42EP1-201ENST00000249014 XRCC5P13010 732 aaKnown RBP21.45■■□□□ 1.02
CDC42EP1-201ENST00000249014 PON1P27169 355 aa21.45■■□□□ 1.02
CDC42EP1-201ENST00000249014 NAB2Q15742 525 aa21.45■■□□□ 1.02
CDC42EP1-201ENST00000249014 ZYXQ15942 572 aaKnown RBP21.45■■□□□ 1.02
CDC42EP1-201ENST00000249014 MAP9Q49MG5 647 aa21.45■■□□□ 1.02
CDC42EP1-201ENST00000249014 DCAF17Q5H9S7 520 aaPredicted RBP21.45■■□□□ 1.02
CDC42EP1-201ENST00000249014 LRRC1Q9BTT6 524 aa21.45■■□□□ 1.02
CDC42EP1-201ENST00000249014 PLCB1Q9NQ66 1216 aa21.45■■□□□ 1.02
CDC42EP1-201ENST00000249014 OLFML3Q9NRN5 406 aa21.45■■□□□ 1.02
CDC42EP1-201ENST00000249014 TGFB1I1O43294 461 aa21.44■■□□□ 1.02
CDC42EP1-201ENST00000249014 UCHL3P15374 230 aa21.44■■□□□ 1.02
CDC42EP1-201ENST00000249014 PPP2R5CQ13362 524 aa21.44■■□□□ 1.02
CDC42EP1-201ENST00000249014 IRF2BP2Q7Z5L9 587 aa21.44■■□□□ 1.02
CDC42EP1-201ENST00000249014 SLC5A5Q92911 643 aa21.44■■□□□ 1.02
CDC42EP1-201ENST00000249014 CCDC102AQ96A19 550 aa21.44■■□□□ 1.02
CDC42EP1-201ENST00000249014 TUFT1Q9NNX1 390 aa21.44■■□□□ 1.02
CDC42EP1-201ENST00000249014 FAN1Q9Y2M0 1017 aa21.44■■□□□ 1.02
CDC42EP1-201ENST00000249014 COL4A5P29400 1685 aa21.44■■□□□ 1.02
CDC42EP1-201ENST00000249014 ZMYM2Q9UBW7 1377 aa21.44■■□□□ 1.02
CDC42EP1-201ENST00000249014 PALMO75781 387 aa21.44■■□□□ 1.02
CDC42EP1-201ENST00000249014 TNNT3P45378 269 aaPredicted RBP21.44■■□□□ 1.02
CDC42EP1-201ENST00000249014 C1orf186Q6ZWK4 172 aa21.44■■□□□ 1.02
CDC42EP1-201ENST00000249014 GMLQ99445 158 aa21.44■■□□□ 1.02
CDC42EP1-201ENST00000249014 VIPAS39Q9H9C1 493 aa21.44■■□□□ 1.02
CDC42EP1-201ENST00000249014 DMGDHQ9UI17 866 aaKnown RBP21.44■■□□□ 1.02
CDC42EP1-201ENST00000249014 ZBTB12Q9Y330 459 aaPredicted RBP21.44■■□□□ 1.02
CDC42EP1-201ENST00000249014 NMT1P30419 496 aaKnown RBP21.43■■□□□ 1.02
CDC42EP1-201ENST00000249014 MATR3P43243 847 aaKnown RBP eCLIP21.43■■□□□ 1.02
CDC42EP1-201ENST00000249014 MRPS25P82663 173 aaKnown RBP21.43■■□□□ 1.02
CDC42EP1-201ENST00000249014 PTK2Q05397 1052 aa21.43■■□□□ 1.02
CDC42EP1-201ENST00000249014 EPHA7Q15375 998 aa21.43■■□□□ 1.02
CDC42EP1-201ENST00000249014 DLGAP5Q15398 846 aa21.43■■□□□ 1.02
CDC42EP1-201ENST00000249014 EXOC3L4Q17RC7 722 aa21.43■■□□□ 1.02
CDC42EP1-201ENST00000249014 SLC35C1Q96A29 364 aa21.43■■□□□ 1.02
CDC42EP1-201ENST00000249014 EXOC4Q96A65 974 aa21.43■■□□□ 1.02
CDC42EP1-201ENST00000249014 WRAP73Q9P2S5 460 aaPredicted RBP21.43■■□□□ 1.02
CDC42EP1-201ENST00000249014 HPCAL4Q9UM19 191 aa21.43■■□□□ 1.02
CDC42EP1-201ENST00000249014 ZC3H4Q9UPT8 1303 aaKnown RBP21.43■■□□□ 1.02
CDC42EP1-201ENST00000249014 KIAA0753Q2KHM9 967 aa21.43■■□□□ 1.02
CDC42EP1-201ENST00000249014 SAMD1Q6SPF0 538 aaPredicted RBP21.43■■□□□ 1.02
CDC42EP1-201ENST00000249014 KCTD17Q8N5Z5 321 aa21.43■■□□□ 1.02
CDC42EP1-201ENST00000249014 RBM46Q8TBY0 533 aaKnown RBP21.43■■□□□ 1.02
CDC42EP1-201ENST00000249014 MS4A14Q96JA4 679 aa21.43■■□□□ 1.02
CDC42EP1-201ENST00000249014 LUC7LQ9NQ29 371 aaKnown RBP21.43■■□□□ 1.02
CDC42EP1-201ENST00000249014 AJAP1Q9UKB5 411 aaPredicted RBP21.43■■□□□ 1.02
CDC42EP1-201ENST00000249014 SLC16A3O15427 465 aaKnown RBP21.42■■□□□ 1.02
CDC42EP1-201ENST00000249014 PHACTR2O75167 634 aa21.42■■□□□ 1.02
CDC42EP1-201ENST00000249014 RPL13P26373 211 aaKnown RBP21.42■■□□□ 1.02
CDC42EP1-201ENST00000249014 TRAF1Q13077 416 aa21.42■■□□□ 1.02
CDC42EP1-201ENST00000249014 ZC2HC1CQ53FD0 456 aaPredicted RBP21.42■■□□□ 1.02
CDC42EP1-201ENST00000249014 CCDC181Q5TID7 509 aa21.42■■□□□ 1.02
CDC42EP1-201ENST00000249014 TCERG1LQ5VWI1 586 aa21.42■■□□□ 1.02
CDC42EP1-201ENST00000249014 MIGA2Q7L4E1 593 aa21.42■■□□□ 1.02
CDC42EP1-201ENST00000249014 ZNF571Q7Z3V5 609 aaPredicted RBP21.42■■□□□ 1.02
CDC42EP1-201ENST00000249014 SELENOOQ9BVL4 669 aa21.42■■□□□ 1.02
CDC42EP1-201ENST00000249014 GLIS2Q9BZE0 524 aaPredicted RBP21.42■■□□□ 1.02
CDC42EP1-201ENST00000249014 TMEM39BQ9GZU3 492 aa21.42■■□□□ 1.02
CDC42EP1-201ENST00000249014 VCPKMTQ9H867 229 aa21.42■■□□□ 1.02
CDC42EP1-201ENST00000249014 SIX2Q9NPC8 291 aa21.42■■□□□ 1.02
CDC42EP1-201ENST00000249014 FBXO28Q9NVF7 368 aa21.42■■□□□ 1.02
CDC42EP1-201ENST00000249014 FAM13AO94988 1023 aa21.41■■□□□ 1.02
CDC42EP1-201ENST00000249014 FTCDO95954 541 aa21.41■■□□□ 1.02
CDC42EP1-201ENST00000249014 VIL1P09327 827 aaKnown RBP21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms