RNA–Protein interactions for RNA: ENST00000248121.6

SYNGR3-201, Transcript of synaptogyrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNGR3, Length 2,051 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-201ENST00000248121 ZBTB48P10074 688 aaPredicted RBP25.86■■□□□ 1.73
SYNGR3-201ENST00000248121 DNM2P50570 870 aa25.86■■□□□ 1.73
SYNGR3-201ENST00000248121 MTF1Q14872 753 aa25.86■■□□□ 1.73
SYNGR3-201ENST00000248121 CNGA4Q8IV77 575 aa25.86■■□□□ 1.73
SYNGR3-201ENST00000248121 TPH2Q8IWU9 490 aa25.86■■□□□ 1.73
SYNGR3-201ENST00000248121 KCTD17Q8N5Z5 321 aa25.86■■□□□ 1.73
SYNGR3-201ENST00000248121 PIGOQ8TEQ8 1089 aa25.86■■□□□ 1.73
SYNGR3-201ENST00000248121 SMCR8Q8TEV9 937 aaPredicted RBP25.86■■□□□ 1.73
SYNGR3-201ENST00000248121 PASKQ96RG2 1323 aa25.86■■□□□ 1.73
SYNGR3-201ENST00000248121 SOWAHBA6NEL2 793 aa25.86■■□□□ 1.73
SYNGR3-201ENST00000248121 MTIF2P46199 727 aaKnown RBP25.86■■□□□ 1.73
SYNGR3-201ENST00000248121 ANKRD13CQ8N6S4 541 aa25.86■■□□□ 1.73
SYNGR3-201ENST00000248121 RIT2Q99578 217 aa25.86■■□□□ 1.73
SYNGR3-201ENST00000248121 EFCC1Q9HA90 598 aa25.86■■□□□ 1.73
SYNGR3-201ENST00000248121 FBXO40Q9UH90 709 aa25.86■■□□□ 1.73
SYNGR3-201ENST00000248121 TELO2Q9Y4R8 837 aa25.86■■□□□ 1.73
SYNGR3-201ENST00000248121 PFASO15067 1338 aa25.85■■□□□ 1.73
SYNGR3-201ENST00000248121 SOWAHDA6NJG2 315 aa25.85■■□□□ 1.73
SYNGR3-201ENST00000248121 RSPH10B2B2RC85 870 aa25.85■■□□□ 1.73
SYNGR3-201ENST00000248121 PES1O00541 588 aaKnown RBP25.85■■□□□ 1.73
SYNGR3-201ENST00000248121 RSPH10BP0C881 870 aa25.85■■□□□ 1.73
SYNGR3-201ENST00000248121 CASP5P51878 434 aa25.85■■□□□ 1.73
SYNGR3-201ENST00000248121 TRIM14Q14142 442 aa25.85■■□□□ 1.73
SYNGR3-201ENST00000248121 FGD4Q96M96 766 aa25.85■■□□□ 1.73
SYNGR3-201ENST00000248121 INPP4AQ96PE3 977 aaPredicted RBP25.85■■□□□ 1.73
SYNGR3-201ENST00000248121 PNMA3Q9UL41 463 aa25.85■■□□□ 1.73
SYNGR3-201ENST00000248121 PPP2R2CQ9Y2T4 447 aa25.85■■□□□ 1.73
SYNGR3-201ENST00000248121 RIOK3O14730 519 aaKnown RBP25.84■■□□□ 1.73
SYNGR3-201ENST00000248121 ALDH5A1P51649 535 aaPredicted RBP25.84■■□□□ 1.73
SYNGR3-201ENST00000248121 EPHA7Q15375 998 aa25.84■■□□□ 1.73
SYNGR3-201ENST00000248121 WDR78Q5VTH9 848 aa25.84■■□□□ 1.73
SYNGR3-201ENST00000248121 RINT1Q6NUQ1 792 aa25.84■■□□□ 1.73
SYNGR3-201ENST00000248121 ANKRD23Q86SG2 305 aa25.84■■□□□ 1.73
SYNGR3-201ENST00000248121 SAPCD2Q86UD0 394 aa25.84■■□□□ 1.73
SYNGR3-201ENST00000248121 CCDC51Q96ER9 411 aa25.84■■□□□ 1.73
SYNGR3-201ENST00000248121 NOC4LQ9BVI4 516 aaKnown RBP25.84■■□□□ 1.73
SYNGR3-201ENST00000248121 KCTD10Q9H3F6 313 aa25.84■■□□□ 1.73
SYNGR3-201ENST00000248121 ZHX3Q9H4I2 956 aa25.84■■□□□ 1.73
SYNGR3-201ENST00000248121 RASSF10A6NK89 507 aa25.84■■□□□ 1.73
SYNGR3-201ENST00000248121 RAD9BQ6WBX8 426 aa25.84■■□□□ 1.73
SYNGR3-201ENST00000248121 SFR1Q86XK3 245 aa25.84■■□□□ 1.73
SYNGR3-201ENST00000248121 NELFCDQ8IXH7 590 aa25.84■■□□□ 1.73
SYNGR3-201ENST00000248121 ABHD10Q9NUJ1 306 aa25.84■■□□□ 1.73
SYNGR3-201ENST00000248121 KIF3CO14782 793 aa25.83■■□□□ 1.73
SYNGR3-201ENST00000248121 SLC25A27O95847 323 aa25.83■■□□□ 1.73
SYNGR3-201ENST00000248121 ZNF157P51786 506 aaPredicted RBP25.83■■□□□ 1.73
SYNGR3-201ENST00000248121 FAM133AQ8N9E0 248 aa25.83■■□□□ 1.73
SYNGR3-201ENST00000248121 NAA15Q9BXJ9 866 aaKnown RBP25.83■■□□□ 1.73
SYNGR3-201ENST00000248121 POLD4Q9HCU8 107 aa25.83■■□□□ 1.73
SYNGR3-201ENST00000248121 PLXNA1Q9UIW2 1896 aa25.83■■□□□ 1.72
SYNGR3-201ENST00000248121 TTC26A0AVF1 554 aa25.83■■□□□ 1.72
SYNGR3-201ENST00000248121 SORBS3O60504 671 aa25.83■■□□□ 1.72
SYNGR3-201ENST00000248121 KLK7P49862 253 aa25.83■■□□□ 1.72
SYNGR3-201ENST00000248121 ZNF592Q92610 1267 aa25.83■■□□□ 1.72
SYNGR3-201ENST00000248121 TSG101Q99816 390 aa25.83■■□□□ 1.72
SYNGR3-201ENST00000248121 GPBP1L1Q9HC44 474 aaPredicted RBP25.83■■□□□ 1.72
SYNGR3-201ENST00000248121 POTEB2H3BUK9 544 aa25.82■■□□□ 1.72
SYNGR3-201ENST00000248121 TBC1D8BQ0IIM8 1120 aa25.82■■□□□ 1.72
SYNGR3-201ENST00000248121 C1orf186Q6ZWK4 172 aa25.82■■□□□ 1.72
SYNGR3-201ENST00000248121 EPM2AIP1Q7L775 607 aaPredicted RBP25.82■■□□□ 1.72
SYNGR3-201ENST00000248121 BANK1Q8NDB2 785 aa25.82■■□□□ 1.72
SYNGR3-201ENST00000248121 DESI2Q9BSY9 194 aa25.82■■□□□ 1.72
SYNGR3-201ENST00000248121 TTYH3Q9C0H2 523 aa25.82■■□□□ 1.72
SYNGR3-201ENST00000248121 SLC45A1Q9Y2W3 748 aa25.82■■□□□ 1.72
SYNGR3-201ENST00000248121 CCP110O43303 1012 aa25.81■■□□□ 1.72
SYNGR3-201ENST00000248121 CCNE2O96020 404 aa25.81■■□□□ 1.72
SYNGR3-201ENST00000248121 TPM1P09493 284 aa25.81■■□□□ 1.72
SYNGR3-201ENST00000248121 MUTP22033 750 aa25.81■■□□□ 1.72
SYNGR3-201ENST00000248121 KRT9P35527 623 aa25.81■■□□□ 1.72
SYNGR3-201ENST00000248121 DNERQ8NFT8 737 aa25.81■■□□□ 1.72
SYNGR3-201ENST00000248121 IGF2BP3O00425 579 aaKnown RBP eCLIP25.81■■□□□ 1.72
SYNGR3-201ENST00000248121 FGFR1OPO95684 399 aaKnown RBP25.81■■□□□ 1.72
SYNGR3-201ENST00000248121 HOXD13P35453 343 aa25.81■■□□□ 1.72
SYNGR3-201ENST00000248121 FKBP3Q00688 224 aaKnown RBP25.81■■□□□ 1.72
SYNGR3-201ENST00000248121 SYCP1Q15431 976 aa25.81■■□□□ 1.72
SYNGR3-201ENST00000248121 XRRA1Q6P2D8 792 aa25.81■■□□□ 1.72
SYNGR3-201ENST00000248121 LXNQ9BS40 222 aa25.81■■□□□ 1.72
SYNGR3-201ENST00000248121 PAXBP1Q9Y5B6 917 aa25.81■■□□□ 1.72
SYNGR3-201ENST00000248121 KCNA2P16389 499 aa25.8■■□□□ 1.72
SYNGR3-201ENST00000248121 GTF2F1P35269 517 aaKnown RBP eCLIP25.8■■□□□ 1.72
SYNGR3-201ENST00000248121 VWA3BQ502W6 1294 aa25.8■■□□□ 1.72
SYNGR3-201ENST00000248121 TRIM65Q6PJ69 517 aa25.8■■□□□ 1.72
SYNGR3-201ENST00000248121 GPRASP2Q96D09 838 aa25.8■■□□□ 1.72
SYNGR3-201ENST00000248121 ERGIC2Q96RQ1 377 aa25.8■■□□□ 1.72
SYNGR3-201ENST00000248121 MMP19Q99542 508 aa25.8■■□□□ 1.72
SYNGR3-201ENST00000248121 ZSCAN12O43309 604 aa25.79■■□□□ 1.72
SYNGR3-201ENST00000248121 SP2Q02086 613 aa25.79■■□□□ 1.72
SYNGR3-201ENST00000248121 ZC3H3Q8IXZ2 948 aaKnown RBP25.79■■□□□ 1.72
SYNGR3-201ENST00000248121 CAPN11Q9UMQ6 739 aa25.79■■□□□ 1.72
SYNGR3-201ENST00000248121 KIF2AO00139 706 aaPredicted RBP25.79■■□□□ 1.72
SYNGR3-201ENST00000248121 MYBP10242 640 aa25.79■■□□□ 1.72
SYNGR3-201ENST00000248121 MAN2A1Q16706 1144 aa25.79■■□□□ 1.72
SYNGR3-201ENST00000248121 DHX30Q7L2E3 1194 aaKnown RBP eCLIP25.79■■□□□ 1.722e-6■■■■□ 25.5
SYNGR3-201ENST00000248121 MIER3Q7Z3K6 550 aa25.79■■□□□ 1.72
SYNGR3-201ENST00000248121 GPRC5AQ8NFJ5 357 aa25.79■■□□□ 1.72
SYNGR3-201ENST00000248121 NACC1Q96RE7 527 aa25.79■■□□□ 1.72
SYNGR3-201ENST00000248121 NDST4Q9H3R1 872 aa25.79■■□□□ 1.72
SYNGR3-201ENST00000248121 DNAJC25-GNG10A0A024R161 153 aa25.78■■□□□ 1.72
SYNGR3-201ENST00000248121 EDNRBP24530 442 aa25.78■■□□□ 1.72
SYNGR3-201ENST00000248121 RGMBQ6NW40 437 aa25.78■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms