RNA–Protein interactions for RNA: ENST00000244763.8

SSR1-201, Transcript of signal sequence receptor subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR1, Length 9,669 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-201ENST00000244763 KLC2Q9H0B6 622 aa7.9□□□□□ -1.15
SSR1-201ENST00000244763 CDC23Q9UJX2 597 aa7.9□□□□□ -1.15
SSR1-201ENST00000244763 PCDHA5Q9Y5H7 936 aa7.9□□□□□ -1.15
SSR1-201ENST00000244763 STK36Q9NRP7 1315 aa7.9□□□□□ -1.15
SSR1-201ENST00000244763 TRAPPC3O43617 180 aa7.9□□□□□ -1.15
SSR1-201ENST00000244763 ZNF18P17022 549 aa7.9□□□□□ -1.15
SSR1-201ENST00000244763 U2AF2P26368 475 aaKnown RBP eCLIP7.9□□□□□ -1.152e-7■■□□□ 13.1
SSR1-201ENST00000244763 TRIM72Q6ZMU5 477 aa7.9□□□□□ -1.15
SSR1-201ENST00000244763 MIGA2Q7L4E1 593 aa7.9□□□□□ -1.15
SSR1-201ENST00000244763 TRIM15Q9C019 465 aa7.9□□□□□ -1.15
SSR1-201ENST00000244763 ATP6V0A4Q9HBG4 840 aa7.9□□□□□ -1.15
SSR1-201ENST00000244763 SMYD2Q9NRG4 433 aa7.9□□□□□ -1.15
SSR1-201ENST00000244763 PCDHB8Q9UN66 801 aa7.9□□□□□ -1.15
SSR1-201ENST00000244763 KIF28PB7ZC32 967 aa7.89□□□□□ -1.15
SSR1-201ENST00000244763 STXBP3O00186 592 aa7.89□□□□□ -1.15
SSR1-201ENST00000244763 SLC8A1P32418 973 aa7.89□□□□□ -1.15
SSR1-201ENST00000244763 SLC16A2P36021 539 aa7.89□□□□□ -1.15
SSR1-201ENST00000244763 RAB42Q8N4Z0 105 aa7.89□□□□□ -1.15
SSR1-201ENST00000244763 GDAP1Q8TB36 358 aa7.89□□□□□ -1.15
SSR1-201ENST00000244763 MTRQ99707 1265 aa7.89□□□□□ -1.15
SSR1-201ENST00000244763 TEX12Q9BXU0 123 aa7.89□□□□□ -1.15
SSR1-201ENST00000244763 MRPL4Q9BYD3 311 aaKnown RBP7.89□□□□□ -1.15
SSR1-201ENST00000244763 ERVK-7P63135 1459 aa7.89□□□□□ -1.15
SSR1-201ENST00000244763 LRRN2O75325 713 aa7.89□□□□□ -1.15
SSR1-201ENST00000244763 ZBED1O96006 694 aa7.89□□□□□ -1.15
SSR1-201ENST00000244763 ZFXP17010 805 aaPredicted RBP7.89□□□□□ -1.15
SSR1-201ENST00000244763 PRELPP51888 382 aa7.89□□□□□ -1.15
SSR1-201ENST00000244763 ARHGDIAP52565 204 aa7.89□□□□□ -1.15
SSR1-201ENST00000244763 TAP1Q03518 808 aa7.89□□□□□ -1.15
SSR1-201ENST00000244763 EHHADHQ08426 723 aa7.89□□□□□ -1.15
SSR1-201ENST00000244763 NOP9Q86U38 636 aaKnown RBP7.89□□□□□ -1.15
SSR1-201ENST00000244763 SYNE4Q8N205 404 aa7.89□□□□□ -1.15
SSR1-201ENST00000244763 SCG3Q8WXD2 468 aaKnown RBP7.89□□□□□ -1.15
SSR1-201ENST00000244763 RABGGTAQ92696 567 aa7.89□□□□□ -1.15
SSR1-201ENST00000244763 MMP19Q99542 508 aa7.89□□□□□ -1.15
SSR1-201ENST00000244763 EIF2AQ9BY44 585 aaKnown RBP7.89□□□□□ -1.15
SSR1-201ENST00000244763 CD209Q9NNX6 404 aa7.89□□□□□ -1.15
SSR1-201ENST00000244763 PTPN22Q9Y2R2 807 aa7.89□□□□□ -1.15
SSR1-201ENST00000244763 MYLK4Q86YV6 388 aaPredicted RBP7.89□□□□□ -1.15
SSR1-201ENST00000244763 PDIK1LQ8N165 341 aa7.89□□□□□ -1.15
SSR1-201ENST00000244763 TTLL11Q8NHH1 800 aa7.89□□□□□ -1.15
SSR1-201ENST00000244763 OLA1Q9NTK5 396 aaKnown RBP7.89□□□□□ -1.15
SSR1-201ENST00000244763 SAMD9LQ8IVG5 1584 aa7.89□□□□□ -1.15
SSR1-201ENST00000244763 UTYO14607 1347 aa7.89□□□□□ -1.15
SSR1-201ENST00000244763 GH2P01242 217 aa7.89□□□□□ -1.15
SSR1-201ENST00000244763 EIF2AK2P19525 551 aaKnown RBP7.89□□□□□ -1.15
SSR1-201ENST00000244763 GIPC2Q8TF65 315 aa7.89□□□□□ -1.15
SSR1-201ENST00000244763 IFT43Q96FT9 208 aa7.89□□□□□ -1.15
SSR1-201ENST00000244763 RABEP2Q9H5N1 569 aa7.89□□□□□ -1.15
SSR1-201ENST00000244763 CLGNO14967 610 aa7.89□□□□□ -1.15
SSR1-201ENST00000244763 PTPN12Q05209 780 aaKnown RBP7.89□□□□□ -1.15
SSR1-201ENST00000244763 SUSD4Q5VX71 490 aa7.89□□□□□ -1.15
SSR1-201ENST00000244763 CFAP61Q8NHU2 1237 aa7.89□□□□□ -1.15
SSR1-201ENST00000244763 DEPDC1BQ8WUY9 529 aa7.89□□□□□ -1.15
SSR1-201ENST00000244763 MRPL40Q9NQ50 206 aaKnown RBP7.89□□□□□ -1.15
SSR1-201ENST00000244763 RCOR1Q9UKL0 485 aa7.89□□□□□ -1.15
SSR1-201ENST00000244763 PREX2Q70Z35 1606 aa7.89□□□□□ -1.15
SSR1-201ENST00000244763 GOLGA8SH3BPF8 625 aa7.89□□□□□ -1.15
SSR1-201ENST00000244763 CALB1P05937 261 aa7.89□□□□□ -1.15
SSR1-201ENST00000244763 EPHB4P54760 987 aa7.89□□□□□ -1.15
SSR1-201ENST00000244763 SP8Q8IXZ3 490 aa7.89□□□□□ -1.15
SSR1-201ENST00000244763 PCIF1Q9H4Z3 704 aa7.89□□□□□ -1.15
SSR1-201ENST00000244763 DYRK4Q9NR20 520 aa7.89□□□□□ -1.15
SSR1-201ENST00000244763 ZHX2Q9Y6X8 837 aa7.89□□□□□ -1.15
SSR1-201ENST00000244763 CCDC188H7C350 402 aa7.89□□□□□ -1.15
SSR1-201ENST00000244763 CLIC2O15247 247 aa7.89□□□□□ -1.15
SSR1-201ENST00000244763 OAS2P29728 719 aaKnown RBP7.89□□□□□ -1.15
SSR1-201ENST00000244763 LONRF3Q496Y0 759 aa7.89□□□□□ -1.15
SSR1-201ENST00000244763 TAF1BQ53T94 588 aaPredicted RBP7.89□□□□□ -1.15
SSR1-201ENST00000244763 FRA10AC1Q70Z53 315 aa7.89□□□□□ -1.15
SSR1-201ENST00000244763 CAPS2Q9BXY5 557 aa7.89□□□□□ -1.15
SSR1-201ENST00000244763 CNOT10Q9H9A5 744 aaKnown RBP7.89□□□□□ -1.15
SSR1-201ENST00000244763 STAP1Q9ULZ2 295 aa7.89□□□□□ -1.15
SSR1-201ENST00000244763 BASP1P80723 227 aaKnown RBP7.88□□□□□ -1.15
SSR1-201ENST00000244763 GUCY2DQ02846 1103 aa7.88□□□□□ -1.15
SSR1-201ENST00000244763 CAV1Q03135 178 aa7.88□□□□□ -1.15
SSR1-201ENST00000244763 EEPD1Q7L9B9 569 aa7.88□□□□□ -1.15
SSR1-201ENST00000244763 ZNF579Q8NAF0 562 aaKnown RBP7.88□□□□□ -1.15
SSR1-201ENST00000244763 NSUN7Q8NE18 718 aaKnown RBP7.88□□□□□ -1.15
SSR1-201ENST00000244763 NRBF2Q96F24 287 aa7.88□□□□□ -1.15
SSR1-201ENST00000244763 TRIM54Q9BYV2 358 aa7.88□□□□□ -1.15
SSR1-201ENST00000244763 MINPP1Q9UNW1 487 aa7.88□□□□□ -1.15
SSR1-201ENST00000244763 H7C1W4 665 aa7.88□□□□□ -1.15
SSR1-201ENST00000244763 KIAA0391O15091 583 aaKnown RBP7.88□□□□□ -1.15
SSR1-201ENST00000244763 MARK3P27448 753 aa7.88□□□□□ -1.15
SSR1-201ENST00000244763 LCORLQ8N3X6 602 aa7.88□□□□□ -1.15
SSR1-201ENST00000244763 TMEM106CQ9BVX2 250 aa7.88□□□□□ -1.15
SSR1-201ENST00000244763 BAIAP2L1Q9UHR4 511 aa7.88□□□□□ -1.15
SSR1-201ENST00000244763 USP17L15C9J2P7 530 aa7.88□□□□□ -1.15
SSR1-201ENST00000244763 USP17L13C9JLJ4 530 aa7.88□□□□□ -1.15
SSR1-201ENST00000244763 USP17L11C9JVI0 530 aa7.88□□□□□ -1.15
SSR1-201ENST00000244763 USP17L18D6R9N7 530 aa7.88□□□□□ -1.15
SSR1-201ENST00000244763 USP17L22D6RA61 530 aa7.88□□□□□ -1.15
SSR1-201ENST00000244763 USP17L17D6RBQ6 530 aa7.88□□□□□ -1.15
SSR1-201ENST00000244763 USP17L19D6RCP7 530 aa7.88□□□□□ -1.15
SSR1-201ENST00000244763 USP17L20D6RJB6 530 aa7.88□□□□□ -1.15
SSR1-201ENST00000244763 MOCS3O95396 460 aa7.88□□□□□ -1.15
SSR1-201ENST00000244763 MT-ND3P03897 115 aa7.88□□□□□ -1.15
SSR1-201ENST00000244763 P4HBP07237 508 aaKnown RBP7.88□□□□□ -1.15
SSR1-201ENST00000244763 USP17L24Q0WX57 530 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms