RNA–Protein interactions for RNA: ENST00000243776.10

CHPF-201, Transcript of chondroitin polymerizing factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF, Length 3,013 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF-201ENST00000243776 ARMCX3Q9UH62 379 aaPredicted RBP20.3■□□□□ 0.84
CHPF-201ENST00000243776 TMEM59LQ9UK28 342 aa20.3■□□□□ 0.84
CHPF-201ENST00000243776 PON1P27169 355 aa20.29■□□□□ 0.84
CHPF-201ENST00000243776 PPP4CP60510 307 aa20.29■□□□□ 0.84
CHPF-201ENST00000243776 IFFO1Q0D2I5 559 aa20.29■□□□□ 0.84
CHPF-201ENST00000243776 MFSD14BQ5SR56 506 aa20.29■□□□□ 0.84
CHPF-201ENST00000243776 TPCN2Q8NHX9 752 aa20.29■□□□□ 0.84
CHPF-201ENST00000243776 SCFD2Q8WU76 684 aa20.29■□□□□ 0.84
CHPF-201ENST00000243776 RAPGEF5Q92565 580 aa20.29■□□□□ 0.84
CHPF-201ENST00000243776 SYN2Q92777 582 aaPredicted RBP20.29■□□□□ 0.84
CHPF-201ENST00000243776 OSBPL7Q9BZF2 842 aa20.29■□□□□ 0.84
CHPF-201ENST00000243776 SLC40A1Q9NP59 571 aa20.29■□□□□ 0.84
CHPF-201ENST00000243776 MTMR4Q9NYA4 1195 aa20.29■□□□□ 0.84
CHPF-201ENST00000243776 UFL1O94874 794 aa20.29■□□□□ 0.84
CHPF-201ENST00000243776 LLGL1Q15334 1064 aa20.29■□□□□ 0.84
CHPF-201ENST00000243776 SFR1Q86XK3 245 aa20.29■□□□□ 0.84
CHPF-201ENST00000243776 KSR1Q8IVT5 923 aa20.29■□□□□ 0.84
CHPF-201ENST00000243776 SCLT1Q96NL6 688 aa20.29■□□□□ 0.84
CHPF-201ENST00000243776 CHORDC1Q9UHD1 332 aaPredicted RBP20.29■□□□□ 0.84
CHPF-201ENST00000243776 ROBO3Q96MS0 1386 aa20.29■□□□□ 0.84
CHPF-201ENST00000243776 FGGP02679 453 aa20.29■□□□□ 0.84
CHPF-201ENST00000243776 USP8P40818 1118 aa20.29■□□□□ 0.84
CHPF-201ENST00000243776 SHROOM1Q2M3G4 852 aaPredicted RBP20.29■□□□□ 0.84
CHPF-201ENST00000243776 LRRC57Q8N9N7 239 aa20.29■□□□□ 0.84
CHPF-201ENST00000243776 AKAP3O75969 853 aa20.28■□□□□ 0.84
CHPF-201ENST00000243776 SWT1Q5T5J6 900 aaKnown RBP20.28■□□□□ 0.84
CHPF-201ENST00000243776 AADACL2Q6P093 401 aa20.28■□□□□ 0.84
CHPF-201ENST00000243776 ZNF804AQ7Z570 1209 aa20.28■□□□□ 0.84
CHPF-201ENST00000243776 GLG1Q92896 1179 aa20.28■□□□□ 0.84
CHPF-201ENST00000243776 CEP63Q96MT8 703 aa20.28■□□□□ 0.84
CHPF-201ENST00000243776 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.28■□□□□ 0.845e-19■□□□□ 8.5
CHPF-201ENST00000243776 LRRC27Q9C0I9 530 aa20.28■□□□□ 0.84
CHPF-201ENST00000243776 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.28■□□□□ 0.844e-6■■■■■ 72.1
CHPF-201ENST00000243776 A6NNZ2 444 aa20.28■□□□□ 0.84
CHPF-201ENST00000243776 OPLAHO14841 1288 aa20.28■□□□□ 0.84
CHPF-201ENST00000243776 E2F5Q15329 346 aa20.28■□□□□ 0.84
CHPF-201ENST00000243776 TUBB8Q3ZCM7 444 aa20.28■□□□□ 0.84
CHPF-201ENST00000243776 UBAP2Q5T6F2 1119 aaKnown RBP20.28■□□□□ 0.84
CHPF-201ENST00000243776 CPLX4Q7Z7G2 160 aa20.28■□□□□ 0.84
CHPF-201ENST00000243776 NYXQ9GZU5 481 aa20.28■□□□□ 0.84
CHPF-201ENST00000243776 VCPKMTQ9H867 229 aa20.28■□□□□ 0.84
CHPF-201ENST00000243776 LEMD3Q9Y2U8 911 aa20.28■□□□□ 0.84
CHPF-201ENST00000243776 FAM196BA6NMK8 535 aa20.27■□□□□ 0.84
CHPF-201ENST00000243776 GPSM2P81274 684 aa20.27■□□□□ 0.84
CHPF-201ENST00000243776 CUL5Q93034 780 aa20.27■□□□□ 0.84
CHPF-201ENST00000243776 SEC16BQ96JE7 1060 aa20.27■□□□□ 0.84
CHPF-201ENST00000243776 YY1AP1Q9H869 796 aa20.27■□□□□ 0.84
CHPF-201ENST00000243776 SLC12A6Q9UHW9 1150 aa20.27■□□□□ 0.84
CHPF-201ENST00000243776 CCDC88AQ3V6T2 1871 aa20.27■□□□□ 0.84
CHPF-201ENST00000243776 IRS2Q9Y4H2 1338 aa20.27■□□□□ 0.84
CHPF-201ENST00000243776 RHBDL3P58872 404 aa20.27■□□□□ 0.84
CHPF-201ENST00000243776 PRR16Q569H4 304 aa20.27■□□□□ 0.84
CHPF-201ENST00000243776 GLYCTKQ8IVS8 523 aa20.27■□□□□ 0.84
CHPF-201ENST00000243776 LRRC45Q96CN5 670 aa20.27■□□□□ 0.84
CHPF-201ENST00000243776 PNMA2Q9UL42 364 aa20.27■□□□□ 0.84
CHPF-201ENST00000243776 ESYT2A0FGR8 921 aa20.27■□□□□ 0.83
CHPF-201ENST00000243776 AFPP02771 609 aaKnown RBP20.27■□□□□ 0.83
CHPF-201ENST00000243776 SHBGP04278 402 aa20.27■□□□□ 0.83
CHPF-201ENST00000243776 PPP2R2AP63151 447 aa20.27■□□□□ 0.83
CHPF-201ENST00000243776 CD209Q9NNX6 404 aa20.27■□□□□ 0.83
CHPF-201ENST00000243776 GEMIN8Q9NWZ8 242 aaKnown RBP20.27■□□□□ 0.83
CHPF-201ENST00000243776 ROBO1Q9Y6N7 1651 aa20.26■□□□□ 0.83
CHPF-201ENST00000243776 COL22A1Q8NFW1 1626 aaPredicted RBP20.26■□□□□ 0.83
CHPF-201ENST00000243776 H2AFZP0C0S5 128 aa20.26■□□□□ 0.83
CHPF-201ENST00000243776 XRCC5P13010 732 aaKnown RBP20.26■□□□□ 0.83
CHPF-201ENST00000243776 HOXD13P35453 343 aa20.26■□□□□ 0.83
CHPF-201ENST00000243776 PPP4R3AQ6IN85 833 aa20.26■□□□□ 0.83
CHPF-201ENST00000243776 H2AFVQ71UI9 128 aa20.26■□□□□ 0.83
CHPF-201ENST00000243776 ZKSCAN4Q969J2 545 aaPredicted RBP20.26■□□□□ 0.83
CHPF-201ENST00000243776 MXD3Q9BW11 206 aa20.26■□□□□ 0.83
CHPF-201ENST00000243776 GCNT4Q9P109 453 aa20.26■□□□□ 0.83
CHPF-201ENST00000243776 SPATA31A1Q5TZJ5 1347 aa20.26■□□□□ 0.83
CHPF-201ENST00000243776 DDX3XO00571 662 aaKnown RBP eCLIP20.26■□□□□ 0.831e-31■■■■■ 38.4
CHPF-201ENST00000243776 ECM2O94769 699 aaPredicted RBP20.26■□□□□ 0.83
CHPF-201ENST00000243776 SELENOSQ9BQE4 189 aa20.26■□□□□ 0.83
CHPF-201ENST00000243776 PPP1R9AQ9ULJ8 1098 aa20.26■□□□□ 0.83
CHPF-201ENST00000243776 PNMA6FA0A0J9YX94 578 aa20.25■□□□□ 0.83
CHPF-201ENST00000243776 TRAPPC3O43617 180 aa20.25■□□□□ 0.83
CHPF-201ENST00000243776 CAND2O75155 1236 aa20.25■□□□□ 0.83
CHPF-201ENST00000243776 GNA14O95837 355 aa20.25■□□□□ 0.83
CHPF-201ENST00000243776 POLD1P28340 1107 aa20.25■□□□□ 0.83
CHPF-201ENST00000243776 CUL1Q13616 776 aa20.25■□□□□ 0.83
CHPF-201ENST00000243776 C6orf89Q6UWU4 347 aa20.25■□□□□ 0.83
CHPF-201ENST00000243776 ARFGAP2Q8N6H7 521 aa20.25■□□□□ 0.83
CHPF-201ENST00000243776 PBKQ96KB5 322 aa20.25■□□□□ 0.83
CHPF-201ENST00000243776 REEP2Q9BRK0 252 aa20.25■□□□□ 0.83
CHPF-201ENST00000243776 RIMBP2O15034 1052 aa20.25■□□□□ 0.83
CHPF-201ENST00000243776 RDXP35241 583 aaKnown RBP20.25■□□□□ 0.83
CHPF-201ENST00000243776 CDR1P51861 262 aa20.25■□□□□ 0.83
CHPF-201ENST00000243776 GALCP54803 685 aa20.25■□□□□ 0.83
CHPF-201ENST00000243776 CATSPER3Q86XQ3 398 aa20.25■□□□□ 0.83
CHPF-201ENST00000243776 DHX36Q9H2U1 1008 aaKnown RBP20.25■□□□□ 0.83
CHPF-201ENST00000243776 CXorf56Q9H5V9 222 aa20.25■□□□□ 0.83
CHPF-201ENST00000243776 EPB41L3Q9Y2J2 1087 aaPredicted RBP20.25■□□□□ 0.83
CHPF-201ENST00000243776 RREB1Q92766 1687 aa20.25■□□□□ 0.83
CHPF-201ENST00000243776 GPR75-ASB3A0A0A6YYF3 556 aa20.24■□□□□ 0.83
CHPF-201ENST00000243776 BUB1BO60566 1050 aaPredicted RBP20.24■□□□□ 0.83
CHPF-201ENST00000243776 SLCO1A2P46721 670 aa20.24■□□□□ 0.83
CHPF-201ENST00000243776 MRPL12P52815 198 aaKnown RBP20.24■□□□□ 0.83
CHPF-201ENST00000243776 FAM98CQ17RN3 349 aaKnown RBP20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms