RNA–Protein interactions for RNA: ENST00000241704.7

COPA-201, Transcript of coatomer protein complex subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPA, Length 4,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-201ENST00000241704 KLRC3Q07444 240 aa11.91□□□□□ -0.5
COPA-201ENST00000241704 DMP1Q13316 513 aaPredicted RBP11.91□□□□□ -0.5
COPA-201ENST00000241704 TFDP1Q14186 410 aa11.91□□□□□ -0.5
COPA-201ENST00000241704 NCAPHQ15003 741 aa11.91□□□□□ -0.5
COPA-201ENST00000241704 SRBD1Q8N5C6 995 aaKnown RBP11.91□□□□□ -0.5
COPA-201ENST00000241704 DDX12PQ92771 950 aa11.91□□□□□ -0.5
COPA-201ENST00000241704 HVCN1Q96D96 273 aa11.91□□□□□ -0.5
COPA-201ENST00000241704 INO80BQ9C086 356 aaPredicted RBP11.91□□□□□ -0.5
COPA-201ENST00000241704 HERC5Q9UII4 1024 aaKnown RBP11.91□□□□□ -0.5
COPA-201ENST00000241704 GMNCA6NCL1 334 aa11.9□□□□□ -0.5
COPA-201ENST00000241704 GYS1P13807 737 aa11.9□□□□□ -0.5
COPA-201ENST00000241704 CCNE1P24864 410 aa11.9□□□□□ -0.5
COPA-201ENST00000241704 GUCY1A2P33402 732 aa11.9□□□□□ -0.5
COPA-201ENST00000241704 HHIPL2Q6UWX4 724 aa11.9□□□□□ -0.5
COPA-201ENST00000241704 MMS19Q96T76 1030 aa11.9□□□□□ -0.5
COPA-201ENST00000241704 STIM2Q9P246 746 aa11.9□□□□□ -0.5
COPA-201ENST00000241704 TUBE1Q9UJT0 475 aa11.9□□□□□ -0.5
COPA-201ENST00000241704 MTUS1Q9ULD2 1270 aa11.9□□□□□ -0.5
COPA-201ENST00000241704 TCHHQ07283 1943 aa11.9□□□□□ -0.5
COPA-201ENST00000241704 ZBTB24O43167 697 aaPredicted RBP11.9□□□□□ -0.5
COPA-201ENST00000241704 STAT1P42224 750 aa11.9□□□□□ -0.5
COPA-201ENST00000241704 KRT71Q3SY84 523 aa11.9□□□□□ -0.5
COPA-201ENST00000241704 RUBCNQ92622 972 aa11.9□□□□□ -0.5
COPA-201ENST00000241704 ZBTB10Q96DT7 871 aa11.9□□□□□ -0.5
COPA-201ENST00000241704 STK38LQ9Y2H1 464 aa11.9□□□□□ -0.5
COPA-201ENST00000241704 CCND2P30279 289 aa11.9□□□□□ -0.5
COPA-201ENST00000241704 TAF11Q15544 211 aa11.9□□□□□ -0.5
COPA-201ENST00000241704 STAG2Q8N3U4 1231 aa11.9□□□□□ -0.5
COPA-201ENST00000241704 NAP1L3Q99457 506 aaPredicted RBP11.9□□□□□ -0.5
COPA-201ENST00000241704 APOL6Q9BWW8 343 aa11.9□□□□□ -0.5
COPA-201ENST00000241704 SPZ1Q9BXG8 430 aa11.9□□□□□ -0.5
COPA-201ENST00000241704 MTFR1LQ9H019 292 aa11.9□□□□□ -0.5
COPA-201ENST00000241704 ANAPC4Q9UJX5 808 aa11.9□□□□□ -0.5
COPA-201ENST00000241704 LRFN2Q9ULH4 789 aa11.9□□□□□ -0.5
COPA-201ENST00000241704 SYF2O95926 243 aaKnown RBP11.9□□□□□ -0.51
COPA-201ENST00000241704 HOXA13P31271 388 aaPredicted RBP11.9□□□□□ -0.51
COPA-201ENST00000241704 MRPS9P82933 396 aaKnown RBP11.9□□□□□ -0.51
COPA-201ENST00000241704 GUCY2DQ02846 1103 aa11.9□□□□□ -0.51
COPA-201ENST00000241704 MAK16Q9BXY0 300 aaKnown RBP11.9□□□□□ -0.51
COPA-201ENST00000241704 PPP1R12CQ9BZL4 782 aa11.9□□□□□ -0.51
COPA-201ENST00000241704 HDAC6Q9UBN7 1215 aa11.9□□□□□ -0.51
COPA-201ENST00000241704 SPOPO43791 374 aa11.89□□□□□ -0.51
COPA-201ENST00000241704 RNF207Q6ZRF8 634 aa11.89□□□□□ -0.51
COPA-201ENST00000241704 GJA10Q969M2 543 aa11.89□□□□□ -0.51
COPA-201ENST00000241704 TLDC2A0PJX2 215 aa11.89□□□□□ -0.51
COPA-201ENST00000241704 ANO9A1A5B4 782 aa11.89□□□□□ -0.51
COPA-201ENST00000241704 COBLO75128 1261 aa11.89□□□□□ -0.51
COPA-201ENST00000241704 PLA2G4BP0C869 781 aa11.89□□□□□ -0.51
COPA-201ENST00000241704 SLC7A5Q01650 507 aa11.89□□□□□ -0.51
COPA-201ENST00000241704 LIN9Q5TKA1 542 aa11.89□□□□□ -0.51
COPA-201ENST00000241704 SESTD1Q86VW0 696 aa11.89□□□□□ -0.51
COPA-201ENST00000241704 GPIHBP1Q8IV16 184 aa11.89□□□□□ -0.51
COPA-201ENST00000241704 RNF10Q8N5U6 811 aaKnown RBP11.89□□□□□ -0.51
COPA-201ENST00000241704 MTMR4Q9NYA4 1195 aa11.89□□□□□ -0.51
COPA-201ENST00000241704 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.89□□□□□ -0.51
COPA-201ENST00000241704 GPR75-ASB3A0A0A6YYF3 556 aa11.89□□□□□ -0.51
COPA-201ENST00000241704 ATP2A1O14983 1001 aa11.89□□□□□ -0.51
COPA-201ENST00000241704 DAPK3O43293 454 aa11.89□□□□□ -0.51
COPA-201ENST00000241704 MDH1P40925 334 aaKnown RBP11.89□□□□□ -0.51
COPA-201ENST00000241704 PPP4CP60510 307 aa11.89□□□□□ -0.51
COPA-201ENST00000241704 RASA3Q14644 834 aa11.89□□□□□ -0.51
COPA-201ENST00000241704 ARHGAP44Q17R89 818 aa11.89□□□□□ -0.51
COPA-201ENST00000241704 FAM83BQ5T0W9 1011 aa11.89□□□□□ -0.51
COPA-201ENST00000241704 SEL1L2Q5TEA6 688 aa11.89□□□□□ -0.51
COPA-201ENST00000241704 ABHD10Q9NUJ1 306 aa11.89□□□□□ -0.51
COPA-201ENST00000241704 TPX2Q9ULW0 747 aaKnown RBP11.89□□□□□ -0.51
COPA-201ENST00000241704 PCDHA6Q9UN73 950 aa11.89□□□□□ -0.51
COPA-201ENST00000241704 PCDHA8Q9Y5H6 950 aa11.89□□□□□ -0.51
COPA-201ENST00000241704 TNNC2P02585 160 aa11.88□□□□□ -0.51
COPA-201ENST00000241704 TMEM191BP0C7N4 346 aa11.88□□□□□ -0.51
COPA-201ENST00000241704 NR2F2P24468 414 aa11.88□□□□□ -0.51
COPA-201ENST00000241704 SNAP25P60880 206 aa11.88□□□□□ -0.51
COPA-201ENST00000241704 LRRC41Q15345 812 aa11.88□□□□□ -0.51
COPA-201ENST00000241704 MIS18BP1Q6P0N0 1132 aa11.88□□□□□ -0.51
COPA-201ENST00000241704 SLC17A8Q8NDX2 589 aa11.88□□□□□ -0.51
COPA-201ENST00000241704 FBXO41Q8TF61 875 aa11.88□□□□□ -0.51
COPA-201ENST00000241704 FAM210AQ96ND0 272 aa11.88□□□□□ -0.51
COPA-201ENST00000241704 USP17L15C9J2P7 530 aa11.88□□□□□ -0.51
COPA-201ENST00000241704 USP17L13C9JLJ4 530 aa11.88□□□□□ -0.51
COPA-201ENST00000241704 USP17L11C9JVI0 530 aa11.88□□□□□ -0.51
COPA-201ENST00000241704 USP17L18D6R9N7 530 aa11.88□□□□□ -0.51
COPA-201ENST00000241704 USP17L22D6RA61 530 aa11.88□□□□□ -0.51
COPA-201ENST00000241704 USP17L17D6RBQ6 530 aa11.88□□□□□ -0.51
COPA-201ENST00000241704 USP17L19D6RCP7 530 aa11.88□□□□□ -0.51
COPA-201ENST00000241704 USP17L20D6RJB6 530 aa11.88□□□□□ -0.51
COPA-201ENST00000241704 RANBP1P43487 201 aa11.88□□□□□ -0.51
COPA-201ENST00000241704 YWHAEP62258 255 aaKnown RBP11.88□□□□□ -0.51
COPA-201ENST00000241704 USP17L24Q0WX57 530 aa11.88□□□□□ -0.51
COPA-201ENST00000241704 STYK1Q6J9G0 422 aa11.88□□□□□ -0.51
COPA-201ENST00000241704 DCUN1D2Q6PH85 259 aa11.88□□□□□ -0.51
COPA-201ENST00000241704 USP17L6PQ6QN14 398 aa11.88□□□□□ -0.51
COPA-201ENST00000241704 TBC1D1Q86TI0 1168 aaPredicted RBP11.88□□□□□ -0.51
COPA-201ENST00000241704 ADGRF4Q8IZF3 695 aa11.88□□□□□ -0.51
COPA-201ENST00000241704 KIRREL3Q8IZU9 778 aa11.88□□□□□ -0.51
COPA-201ENST00000241704 SH2D3CQ8N5H7 860 aa11.88□□□□□ -0.51
COPA-201ENST00000241704 EPB41L5Q9HCM4 733 aa11.88□□□□□ -0.51
COPA-201ENST00000241704 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.88□□□□□ -0.51
COPA-201ENST00000241704 ANKRD26Q9UPS8 1709 aa11.88□□□□□ -0.51
COPA-201ENST00000241704 TEX33O43247 280 aa11.88□□□□□ -0.51
COPA-201ENST00000241704 SKAP2O75563 359 aaPredicted RBP11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms