RNA–Protein interactions for RNA: ENST00000234179.6

PRKD3-201, Transcript of protein kinase D3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKD3, Length 5,900 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-201ENST00000234179 ZSCAN10Q96SZ4 725 aaPredicted RBP2.63□□□□□ -1.99
PRKD3-201ENST00000234179 SDF4Q9BRK5 362 aa2.63□□□□□ -1.99
PRKD3-201ENST00000234179 SPZ1Q9BXG8 430 aa2.63□□□□□ -1.99
PRKD3-201ENST00000234179 CELF4Q9BZC1 486 aaKnown RBP2.63□□□□□ -1.99
PRKD3-201ENST00000234179 KANSL3Q9P2N6 904 aa2.63□□□□□ -1.99
PRKD3-201ENST00000234179 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP2.63□□□□□ -1.99
PRKD3-201ENST00000234179 CNTNAP2Q9UHC6 1331 aa2.63□□□□□ -1.99
PRKD3-201ENST00000234179 IGSF9BQ9UPX0 1349 aa2.63□□□□□ -1.99
PRKD3-201ENST00000234179 GRM6O15303 877 aa2.63□□□□□ -1.99
PRKD3-201ENST00000234179 NR1I2O75469 434 aa2.63□□□□□ -1.99
PRKD3-201ENST00000234179 DDAH1O94760 285 aa2.63□□□□□ -1.99
PRKD3-201ENST00000234179 CFBP00751 764 aa2.63□□□□□ -1.99
PRKD3-201ENST00000234179 ZSCAN20P17040 1043 aaPredicted RBP2.63□□□□□ -1.99
PRKD3-201ENST00000234179 NRLP54845 237 aa2.63□□□□□ -1.99
PRKD3-201ENST00000234179 AP3B2Q13367 1082 aa2.63□□□□□ -1.99
PRKD3-201ENST00000234179 PGM5Q15124 567 aa2.63□□□□□ -1.99
PRKD3-201ENST00000234179 C15orf39Q6ZRI6 1047 aa2.63□□□□□ -1.99
PRKD3-201ENST00000234179 CCDC149Q6ZUS6 474 aa2.63□□□□□ -1.99
PRKD3-201ENST00000234179 CATIPQ7Z7H3 387 aa2.63□□□□□ -1.99
PRKD3-201ENST00000234179 VN1R2Q8NFZ6 395 aa2.63□□□□□ -1.99
PRKD3-201ENST00000234179 RDM1Q8NG50 284 aa2.63□□□□□ -1.99
PRKD3-201ENST00000234179 CCDC12Q8WUD4 166 aaPredicted RBP2.63□□□□□ -1.99
PRKD3-201ENST00000234179 POF1BQ8WVV4 589 aa2.63□□□□□ -1.99
PRKD3-201ENST00000234179 CCDC51Q96ER9 411 aa2.63□□□□□ -1.99
PRKD3-201ENST00000234179 TMEM169Q96HH4 297 aa2.63□□□□□ -1.99
PRKD3-201ENST00000234179 C1orf115Q9H7X2 142 aa2.63□□□□□ -1.99
PRKD3-201ENST00000234179 MTUS1Q9ULD2 1270 aa2.63□□□□□ -1.99
PRKD3-201ENST00000234179 DENND3A2RUS2 1198 aa2.62□□□□□ -1.99
PRKD3-201ENST00000234179 MYCLP12524 364 aaPredicted RBP2.62□□□□□ -1.99
PRKD3-201ENST00000234179 RCAN1P53805 252 aa2.62□□□□□ -1.99
PRKD3-201ENST00000234179 PRKCQQ04759 706 aa2.62□□□□□ -1.99
PRKD3-201ENST00000234179 MGAT3Q09327 533 aa2.62□□□□□ -1.99
PRKD3-201ENST00000234179 TDGQ13569 410 aa2.62□□□□□ -1.99
PRKD3-201ENST00000234179 GRM4Q14833 912 aa2.62□□□□□ -1.99
PRKD3-201ENST00000234179 GPNMBQ14956 572 aa2.62□□□□□ -1.99
PRKD3-201ENST00000234179 FAM117BQ6P1L5 589 aa2.62□□□□□ -1.99
PRKD3-201ENST00000234179 CHST3Q7LGC8 479 aa2.62□□□□□ -1.99
PRKD3-201ENST00000234179 RALYLQ86SE5 291 aaKnown RBP2.62□□□□□ -1.99
PRKD3-201ENST00000234179 EXOC4Q96A65 974 aa2.62□□□□□ -1.99
PRKD3-201ENST00000234179 RRP36Q96EU6 259 aaKnown RBP2.62□□□□□ -1.99
PRKD3-201ENST00000234179 CTAGE1Q96RT6 745 aa2.62□□□□□ -1.99
PRKD3-201ENST00000234179 RNPEPQ9H4A4 650 aa2.62□□□□□ -1.99
PRKD3-201ENST00000234179 INCENPQ9NQS7 918 aa2.62□□□□□ -1.99
PRKD3-201ENST00000234179 IL17RBQ9NRM6 502 aa2.62□□□□□ -1.99
PRKD3-201ENST00000234179 DIAPH3Q9NSV4 1193 aa2.62□□□□□ -1.99
PRKD3-201ENST00000234179 RAB23Q9ULC3 237 aa2.62□□□□□ -1.99
PRKD3-201ENST00000234179 MYH4Q9Y623 1939 aa2.62□□□□□ -1.99
PRKD3-201ENST00000234179 MICAL3Q7RTP6 2002 aa2.62□□□□□ -1.99
PRKD3-201ENST00000234179 TMEM8BA6NDV4 472 aa2.62□□□□□ -1.99
PRKD3-201ENST00000234179 SPDYE3A6NKU9 549 aa2.62□□□□□ -1.99
PRKD3-201ENST00000234179 KINO60870 393 aaKnown RBP2.62□□□□□ -1.99
PRKD3-201ENST00000234179 NRIP1P48552 1158 aa2.62□□□□□ -1.99
PRKD3-201ENST00000234179 CRYBB1P53674 252 aaPredicted RBP2.62□□□□□ -1.99
PRKD3-201ENST00000234179 CHMP4BP1P59074 171 aa2.62□□□□□ -1.99
PRKD3-201ENST00000234179 FAM189BP81408 668 aa2.62□□□□□ -1.99
PRKD3-201ENST00000234179 KRT76Q01546 638 aa2.62□□□□□ -1.99
PRKD3-201ENST00000234179 LPIN1Q14693 890 aa2.62□□□□□ -1.99
PRKD3-201ENST00000234179 MBTPS1Q14703 1052 aa2.62□□□□□ -1.99
PRKD3-201ENST00000234179 GRIK4Q16099 956 aa2.62□□□□□ -1.99
PRKD3-201ENST00000234179 IFIT1BQ5T764 474 aaKnown RBP2.62□□□□□ -1.99
PRKD3-201ENST00000234179 LIN28BQ6ZN17 250 aaKnown RBP eCLIP2.62□□□□□ -1.991e-13■■■■■ 63.2
PRKD3-201ENST00000234179 DTWD2Q8NBA8 298 aa2.62□□□□□ -1.99
PRKD3-201ENST00000234179 TMEM175Q9BSA9 504 aa2.62□□□□□ -1.99
PRKD3-201ENST00000234179 RGS18Q9NS28 235 aa2.62□□□□□ -1.99
PRKD3-201ENST00000234179 GMEB2Q9UKD1 530 aa2.62□□□□□ -1.99
PRKD3-201ENST00000234179 PCDHGA2Q9Y5H1 932 aa2.62□□□□□ -1.99
PRKD3-201ENST00000234179 BRWD1Q9NSI6 2320 aa2.62□□□□□ -1.99
PRKD3-201ENST00000234179 TBX10O75333 385 aa2.62□□□□□ -1.99
PRKD3-201ENST00000234179 RPS6KA5O75582 802 aa2.62□□□□□ -1.99
PRKD3-201ENST00000234179 ARIH2O95376 493 aa2.62□□□□□ -1.99
PRKD3-201ENST00000234179 ITGB1P05556 798 aa2.62□□□□□ -1.99
PRKD3-201ENST00000234179 CNR2P34972 360 aa2.62□□□□□ -1.99
PRKD3-201ENST00000234179 LY6KQ17RY6 165 aa2.62□□□□□ -1.99
PRKD3-201ENST00000234179 RRP12Q5JTH9 1297 aaKnown RBP2.62□□□□□ -1.99
PRKD3-201ENST00000234179 MTSS1LQ765P7 747 aa2.62□□□□□ -1.99
PRKD3-201ENST00000234179 ADGRF4Q8IZF3 695 aa2.62□□□□□ -1.99
PRKD3-201ENST00000234179 KREMEN2Q8NCW0 462 aa2.62□□□□□ -1.99
PRKD3-201ENST00000234179 LMBR1Q8WVP7 490 aa2.62□□□□□ -1.99
PRKD3-201ENST00000234179 COPS5Q92905 334 aa2.62□□□□□ -1.99
PRKD3-201ENST00000234179 TRAIPQ9BWF2 469 aa2.62□□□□□ -1.99
PRKD3-201ENST00000234179 RIOX1Q9H6W3 641 aa2.62□□□□□ -1.99
PRKD3-201ENST00000234179 ENTPD7Q9NQZ7 604 aa2.62□□□□□ -1.99
PRKD3-201ENST00000234179 NRBP2Q9NSY0 501 aa2.62□□□□□ -1.99
PRKD3-201ENST00000234179 TBC1D22BQ9NU19 505 aa2.62□□□□□ -1.99
PRKD3-201ENST00000234179 FBXL21Q9UKT6 434 aa2.62□□□□□ -1.99
PRKD3-201ENST00000234179 CDY2AQ9Y6F7 541 aa2.62□□□□□ -1.99
PRKD3-201ENST00000234179 GOLGB1Q14789 3259 aaKnown RBP2.62□□□□□ -1.99
PRKD3-201ENST00000234179 KLRF2D3W0D1 207 aa2.62□□□□□ -1.99
PRKD3-201ENST00000234179 M0R2C6 588 aa2.62□□□□□ -1.99
PRKD3-201ENST00000234179 TECP42680 631 aa2.62□□□□□ -1.99
PRKD3-201ENST00000234179 SETQ01105 290 aaPredicted RBP2.62□□□□□ -1.99
PRKD3-201ENST00000234179 SYNE3Q6ZMZ3 975 aa2.62□□□□□ -1.99
PRKD3-201ENST00000234179 APBB1IPQ7Z5R6 666 aaPredicted RBP2.62□□□□□ -1.99
PRKD3-201ENST00000234179 SMAP1Q8IYB5 467 aaPredicted RBP2.62□□□□□ -1.99
PRKD3-201ENST00000234179 ADSSL1Q8N142 457 aa2.62□□□□□ -1.99
PRKD3-201ENST00000234179 KLHL23Q8NBE8 558 aa2.62□□□□□ -1.99
PRKD3-201ENST00000234179 COLGALT1Q8NBJ5 622 aa2.62□□□□□ -1.99
PRKD3-201ENST00000234179 CCDC26Q8TAB7 109 aa2.62□□□□□ -1.99
PRKD3-201ENST00000234179 URGCPQ8TCY9 931 aa2.62□□□□□ -1.99
PRKD3-201ENST00000234179 KCNG4Q8TDN1 519 aa2.62□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms