RNA–Protein interactions for RNA: ENST00000233468.4

SF3B6-201, Transcript of splicing factor 3b subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B6, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-201ENST00000233468 PLPPR4Q7Z2D5 763 aa12.73□□□□□ -0.37
SF3B6-201ENST00000233468 CCDC155Q8N6L0 562 aa12.73□□□□□ -0.37
SF3B6-201ENST00000233468 RDM1Q8NG50 284 aa12.73□□□□□ -0.37
SF3B6-201ENST00000233468 KAT2BQ92831 832 aa12.73□□□□□ -0.37
SF3B6-201ENST00000233468 SLC5A5Q92911 643 aa12.73□□□□□ -0.37
SF3B6-201ENST00000233468 LENG9Q96B70 501 aa12.73□□□□□ -0.37
SF3B6-201ENST00000233468 C16orf70Q9BSU1 422 aa12.73□□□□□ -0.37
SF3B6-201ENST00000233468 PRDM6Q9NQX0 595 aa12.73□□□□□ -0.37
SF3B6-201ENST00000233468 SAMM50Q9Y512 469 aa12.73□□□□□ -0.37
SF3B6-201ENST00000233468 PCDHA10Q9Y5I2 948 aa12.73□□□□□ -0.37
SF3B6-201ENST00000233468 UMODL1Q5DID0 1318 aa12.72□□□□□ -0.37
SF3B6-201ENST00000233468 EMSYQ7Z589 1322 aa12.72□□□□□ -0.37
SF3B6-201ENST00000233468 GSTTP1A0A1W2PQM5 241 aa12.72□□□□□ -0.37
SF3B6-201ENST00000233468 DDX39AO00148 427 aaKnown RBP12.72□□□□□ -0.37
SF3B6-201ENST00000233468 HAS3O00219 553 aa12.72□□□□□ -0.37
SF3B6-201ENST00000233468 DHX15O43143 795 aaKnown RBP12.72□□□□□ -0.37
SF3B6-201ENST00000233468 ATG7O95352 703 aa12.72□□□□□ -0.37
SF3B6-201ENST00000233468 U2AF2P26368 475 aaKnown RBP eCLIP12.72□□□□□ -0.37
SF3B6-201ENST00000233468 CYP2C18P33260 490 aa12.72□□□□□ -0.37
SF3B6-201ENST00000233468 STAT5BP51692 787 aa12.72□□□□□ -0.37
SF3B6-201ENST00000233468 BECN1Q14457 450 aa12.72□□□□□ -0.37
SF3B6-201ENST00000233468 TMEM92Q6UXU6 159 aa12.72□□□□□ -0.37
SF3B6-201ENST00000233468 ZNF365Q70YC5 407 aa12.72□□□□□ -0.37
SF3B6-201ENST00000233468 FAM126BQ8IXS8 530 aa12.72□□□□□ -0.37
SF3B6-201ENST00000233468 ZNF576Q9H609 170 aa12.72□□□□□ -0.37
SF3B6-201ENST00000233468 BCAS3Q9H6U6 928 aa12.72□□□□□ -0.37
SF3B6-201ENST00000233468 SCN5AQ14524 2016 aa12.72□□□□□ -0.37
SF3B6-201ENST00000233468 TRANK1O15050 2925 aa12.72□□□□□ -0.37
SF3B6-201ENST00000233468 GRIN2DO15399 1336 aa12.71□□□□□ -0.37
SF3B6-201ENST00000233468 NRCAMQ92823 1304 aa12.71□□□□□ -0.37
SF3B6-201ENST00000233468 C17orf102A2RUQ5 167 aa12.71□□□□□ -0.37
SF3B6-201ENST00000233468 NEMFO60524 1076 aa12.71□□□□□ -0.37
SF3B6-201ENST00000233468 DKC1O60832 514 aaKnown RBP eCLIP12.71□□□□□ -0.37
SF3B6-201ENST00000233468 LGR5O75473 907 aa12.71□□□□□ -0.37
SF3B6-201ENST00000233468 CD4P01730 458 aa12.71□□□□□ -0.37
SF3B6-201ENST00000233468 BFSP2Q13515 415 aa12.71□□□□□ -0.37
SF3B6-201ENST00000233468 CALCRLQ16602 461 aa12.71□□□□□ -0.37
SF3B6-201ENST00000233468 PTGISQ16647 500 aa12.71□□□□□ -0.37
SF3B6-201ENST00000233468 RILPL1Q5EBL4 403 aa12.71□□□□□ -0.37
SF3B6-201ENST00000233468 ABHD15Q6UXT9 468 aa12.71□□□□□ -0.37
SF3B6-201ENST00000233468 ETNPPLQ8TBG4 499 aa12.71□□□□□ -0.37
SF3B6-201ENST00000233468 AFAP1L1Q8TED9 768 aa12.71□□□□□ -0.37
SF3B6-201ENST00000233468 TIFAQ96CG3 184 aa12.71□□□□□ -0.37
SF3B6-201ENST00000233468 PBX4Q9BYU1 374 aa12.71□□□□□ -0.37
SF3B6-201ENST00000233468 KCNMB3Q9NPA1 279 aa12.71□□□□□ -0.37
SF3B6-201ENST00000233468 ZNF302Q9NR11 478 aa12.71□□□□□ -0.37
SF3B6-201ENST00000233468 DISC1Q9NRI5 854 aa12.71□□□□□ -0.37
SF3B6-201ENST00000233468 GTF2IRD1Q9UHL9 959 aa12.71□□□□□ -0.37
SF3B6-201ENST00000233468 TMEM265A0A087WTH1 108 aa12.7□□□□□ -0.38
SF3B6-201ENST00000233468 RRN3P2A6NIE6 340 aa12.7□□□□□ -0.38
SF3B6-201ENST00000233468 SLC37A4O43826 429 aa12.7□□□□□ -0.38
SF3B6-201ENST00000233468 EDIL3O43854 480 aa12.7□□□□□ -0.38
SF3B6-201ENST00000233468 B4GALT4O60513 344 aa12.7□□□□□ -0.38
SF3B6-201ENST00000233468 PSMD10O75832 226 aa12.7□□□□□ -0.38
SF3B6-201ENST00000233468 RPLP2P05387 115 aaKnown RBP12.7□□□□□ -0.38
SF3B6-201ENST00000233468 ATP2B1P20020 1258 aa12.7□□□□□ -0.38
SF3B6-201ENST00000233468 PPIGQ13427 754 aaKnown RBP eCLIP12.7□□□□□ -0.38
SF3B6-201ENST00000233468 EARS2Q5JPH6 523 aaKnown RBP12.7□□□□□ -0.38
SF3B6-201ENST00000233468 RASIP1Q5U651 963 aa12.7□□□□□ -0.38
SF3B6-201ENST00000233468 PDXDC2PQ6P474 469 aa12.7□□□□□ -0.38
SF3B6-201ENST00000233468 MIER3Q7Z3K6 550 aa12.7□□□□□ -0.38
SF3B6-201ENST00000233468 BRAPQ7Z569 592 aa12.7□□□□□ -0.38
SF3B6-201ENST00000233468 RETREG2Q8NC44 543 aa12.7□□□□□ -0.38
SF3B6-201ENST00000233468 CAGE1Q8TC20 777 aa12.7□□□□□ -0.38
SF3B6-201ENST00000233468 PPM1EQ8WY54 764 aa12.7□□□□□ -0.38
SF3B6-201ENST00000233468 FAM167AQ96KS9 214 aa12.7□□□□□ -0.38
SF3B6-201ENST00000233468 TRPV6Q9H1D0 765 aa12.7□□□□□ -0.38
SF3B6-201ENST00000233468 CXXC1Q9P0U4 656 aaPredicted RBP12.7□□□□□ -0.38
SF3B6-201ENST00000233468 HDAC6Q9UBN7 1215 aa12.7□□□□□ -0.38
SF3B6-201ENST00000233468 IGKV6D-21A0A0A0MT36 114 aa12.69□□□□□ -0.38
SF3B6-201ENST00000233468 VPS37CA5D8V6 355 aaPredicted RBP12.69□□□□□ -0.38
SF3B6-201ENST00000233468 CHMP2AO43633 222 aa12.69□□□□□ -0.38
SF3B6-201ENST00000233468 CCNE2O96020 404 aa12.69□□□□□ -0.38
SF3B6-201ENST00000233468 SMIM10L2AP0DMW4 78 aa12.69□□□□□ -0.38
SF3B6-201ENST00000233468 SMIM10L2BP0DMW5 78 aa12.69□□□□□ -0.38
SF3B6-201ENST00000233468 MCM7P33993 719 aa12.69□□□□□ -0.38
SF3B6-201ENST00000233468 PPFIA1Q13136 1202 aa12.69□□□□□ -0.38
SF3B6-201ENST00000233468 PTK7Q13308 1070 aa12.69□□□□□ -0.38
SF3B6-201ENST00000233468 PPP2R5CQ13362 524 aa12.69□□□□□ -0.38
SF3B6-201ENST00000233468 TTC38Q5R3I4 469 aa12.69□□□□□ -0.38
SF3B6-201ENST00000233468 SWSAP1Q6NVH7 229 aa12.69□□□□□ -0.38
SF3B6-201ENST00000233468 CKAP2LQ8IYA6 745 aa12.69□□□□□ -0.38
SF3B6-201ENST00000233468 TMEM199Q8N511 208 aa12.69□□□□□ -0.38
SF3B6-201ENST00000233468 ATP6V0A1Q93050 837 aa12.69□□□□□ -0.38
SF3B6-201ENST00000233468 HIPK3Q9H422 1215 aa12.69□□□□□ -0.38
SF3B6-201ENST00000233468 PRDM12Q9H4Q4 367 aa12.69□□□□□ -0.38
SF3B6-201ENST00000233468 NRBP2Q9NSY0 501 aa12.69□□□□□ -0.38
SF3B6-201ENST00000233468 TRMT13Q9NUP7 481 aaKnown RBP12.69□□□□□ -0.38
SF3B6-201ENST00000233468 PCDHA12Q9UN75 941 aa12.69□□□□□ -0.38
SF3B6-201ENST00000233468 CEP131Q9UPN4 1083 aa12.69□□□□□ -0.38
SF3B6-201ENST00000233468 XIRP2A4UGR9 3374 aa12.69□□□□□ -0.38
SF3B6-201ENST00000233468 TCF20Q9UGU0 1960 aaKnown RBP12.69□□□□□ -0.38
SF3B6-201ENST00000233468 POTEB3A0JP26 581 aa12.68□□□□□ -0.38
SF3B6-201ENST00000233468 FAM205CA6NFA0 338 aa12.68□□□□□ -0.38
SF3B6-201ENST00000233468 RBAK-RBAKDNI3L0D1 243 aa12.68□□□□□ -0.38
SF3B6-201ENST00000233468 LAD1O00515 517 aa12.68□□□□□ -0.38
SF3B6-201ENST00000233468 HBP1O60381 514 aa12.68□□□□□ -0.38
SF3B6-201ENST00000233468 PARNO95453 639 aaKnown RBP12.68□□□□□ -0.38
SF3B6-201ENST00000233468 MARK3P27448 753 aa12.68□□□□□ -0.38
SF3B6-201ENST00000233468 CCL23P55773 120 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms