RNA–Protein interactions for RNA: ENST00000233146.6

MSH2-201, Transcript of mutS homolog 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH2, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-201ENST00000233146 MAP7Q14244 749 aa14.11□□□□□ -0.15
MSH2-201ENST00000233146 CWF19L2Q2TBE0 894 aaKnown RBP14.11□□□□□ -0.15
MSH2-201ENST00000233146 TCERG1LQ5VWI1 586 aa14.11□□□□□ -0.15
MSH2-201ENST00000233146 DIS3L2Q8IYB7 885 aaKnown RBP14.11□□□□□ -0.15
MSH2-201ENST00000233146 STAG2Q8N3U4 1231 aa14.11□□□□□ -0.15
MSH2-201ENST00000233146 SYMPKQ92797 1274 aaKnown RBP14.11□□□□□ -0.15
MSH2-201ENST00000233146 INPP5DQ92835 1189 aa14.11□□□□□ -0.15
MSH2-201ENST00000233146 RNF25Q96BH1 459 aaPredicted RBP14.11□□□□□ -0.15
MSH2-201ENST00000233146 NACA2Q9H009 215 aa14.11□□□□□ -0.15
MSH2-201ENST00000233146 DENND2DQ9H6A0 471 aaPredicted RBP14.11□□□□□ -0.15
MSH2-201ENST00000233146 ITGB1BP2Q9UKP3 347 aa14.11□□□□□ -0.15
MSH2-201ENST00000233146 USH1CQ9Y6N9 552 aa14.11□□□□□ -0.15
MSH2-201ENST00000233146 MYH6P13533 1939 aa14.11□□□□□ -0.15
MSH2-201ENST00000233146 TRIM43BA6NCK2 446 aa14.11□□□□□ -0.15
MSH2-201ENST00000233146 TCP11X1B4DZS4 312 aa14.11□□□□□ -0.15
MSH2-201ENST00000233146 UBE2Q2LH0YL09 131 aa14.11□□□□□ -0.15
MSH2-201ENST00000233146 AKR1B10O60218 316 aa14.11□□□□□ -0.15
MSH2-201ENST00000233146 PALMO75781 387 aa14.11□□□□□ -0.15
MSH2-201ENST00000233146 AGTP01019 485 aa14.11□□□□□ -0.15
MSH2-201ENST00000233146 DNA2P51530 1060 aa14.11□□□□□ -0.15
MSH2-201ENST00000233146 HAND2P61296 217 aa14.11□□□□□ -0.15
MSH2-201ENST00000233146 TTLL12Q14166 644 aaPredicted RBP14.11□□□□□ -0.15
MSH2-201ENST00000233146 KLC3Q6P597 504 aa14.11□□□□□ -0.15
MSH2-201ENST00000233146 NCOA7Q8NI08 942 aa14.11□□□□□ -0.15
MSH2-201ENST00000233146 TEKT1Q969V4 418 aa14.11□□□□□ -0.15
MSH2-201ENST00000233146 FOXP1Q9H334 677 aaPredicted RBP14.11□□□□□ -0.15
MSH2-201ENST00000233146 MAP3K2Q9Y2U5 619 aa14.11□□□□□ -0.15
MSH2-201ENST00000233146 TMED5Q9Y3A6 229 aa14.11□□□□□ -0.15
MSH2-201ENST00000233146 PTPRUQ92729 1446 aa14.1□□□□□ -0.15
MSH2-201ENST00000233146 GRM8O00222 908 aa14.1□□□□□ -0.15
MSH2-201ENST00000233146 CES2O00748 559 aa14.1□□□□□ -0.15
MSH2-201ENST00000233146 HLFQ16534 295 aa14.1□□□□□ -0.15
MSH2-201ENST00000233146 SLC44A4Q53GD3 710 aa14.1□□□□□ -0.15
MSH2-201ENST00000233146 COL23A1Q86Y22 540 aaPredicted RBP14.1□□□□□ -0.15
MSH2-201ENST00000233146 C2CD5Q86YS7 1000 aa14.1□□□□□ -0.15
MSH2-201ENST00000233146 SCUBE1Q8IWY4 988 aa14.1□□□□□ -0.15
MSH2-201ENST00000233146 DBNDD2Q9BQY9 259 aa14.1□□□□□ -0.15
MSH2-201ENST00000233146 DDX21Q9NR30 783 aaKnown RBP eCLIP14.1□□□□□ -0.15
MSH2-201ENST00000233146 CCDC169A6NNP5 214 aa14.1□□□□□ -0.15
MSH2-201ENST00000233146 FTCDO95954 541 aa14.1□□□□□ -0.15
MSH2-201ENST00000233146 NAT14Q8WUY8 206 aa14.1□□□□□ -0.15
MSH2-201ENST00000233146 DDX50Q9BQ39 737 aaKnown RBP14.1□□□□□ -0.15
MSH2-201ENST00000233146 TUBGCP2Q9BSJ2 902 aa14.1□□□□□ -0.15
MSH2-201ENST00000233146 AZI2Q9H6S1 392 aa14.1□□□□□ -0.15
MSH2-201ENST00000233146 ANXA1P04083 346 aa14.1□□□□□ -0.15
MSH2-201ENST00000233146 GIT2Q14161 759 aa14.1□□□□□ -0.15
MSH2-201ENST00000233146 MYBPC2Q14324 1141 aa14.1□□□□□ -0.15
MSH2-201ENST00000233146 DHX36Q9H2U1 1008 aaKnown RBP14.1□□□□□ -0.15
MSH2-201ENST00000233146 LUC7LQ9NQ29 371 aaKnown RBP14.1□□□□□ -0.15
MSH2-201ENST00000233146 DDX43Q9NXZ2 648 aaKnown RBP14.1□□□□□ -0.15
MSH2-201ENST00000233146 SEC63Q9UGP8 760 aaKnown RBP14.1□□□□□ -0.15
MSH2-201ENST00000233146 EFR3BQ9Y2G0 817 aa14.1□□□□□ -0.15
MSH2-201ENST00000233146 GDAQ9Y2T3 454 aa14.1□□□□□ -0.15
MSH2-201ENST00000233146 PARP4Q9UKK3 1724 aaKnown RBP14.09□□□□□ -0.15
MSH2-201ENST00000233146 RGS16O15492 202 aaPredicted RBP14.09□□□□□ -0.15
MSH2-201ENST00000233146 RXRAP19793 462 aa14.09□□□□□ -0.15
MSH2-201ENST00000233146 CDK7P50613 346 aa14.09□□□□□ -0.15
MSH2-201ENST00000233146 PMS1P54277 932 aaKnown RBP14.09□□□□□ -0.15
MSH2-201ENST00000233146 ASTE1Q2TB18 679 aaPredicted RBP14.09□□□□□ -0.15
MSH2-201ENST00000233146 OLFML2BQ68BL8 750 aa14.09□□□□□ -0.15
MSH2-201ENST00000233146 PROSER2Q86WR7 435 aaPredicted RBP14.09□□□□□ -0.15
MSH2-201ENST00000233146 ADSSL1Q8N142 457 aa14.09□□□□□ -0.15
MSH2-201ENST00000233146 ERMNQ8TAM6 284 aa14.09□□□□□ -0.15
MSH2-201ENST00000233146 ABTB1Q969K4 478 aaPredicted RBP14.09□□□□□ -0.15
MSH2-201ENST00000233146 ERGIC2Q96RQ1 377 aa14.09□□□□□ -0.15
MSH2-201ENST00000233146 TBC1D10AQ9BXI6 508 aa14.09□□□□□ -0.15
MSH2-201ENST00000233146 STK32BQ9NY57 414 aa14.09□□□□□ -0.15
MSH2-201ENST00000233146 FOXP2O15409 715 aa14.09□□□□□ -0.15
MSH2-201ENST00000233146 GTPBP6O43824 516 aaPredicted RBP14.09□□□□□ -0.15
MSH2-201ENST00000233146 HOXB7P09629 217 aa14.09□□□□□ -0.15
MSH2-201ENST00000233146 PABPC4LP0CB38 370 aaKnown RBP14.09□□□□□ -0.15
MSH2-201ENST00000233146 UBTFL6P0CB48 400 aaPredicted RBP14.09□□□□□ -0.15
MSH2-201ENST00000233146 MYL6BP14649 208 aa14.09□□□□□ -0.15
MSH2-201ENST00000233146 VAV1P15498 845 aa14.09□□□□□ -0.15
MSH2-201ENST00000233146 SMARCA1P28370 1054 aa14.09□□□□□ -0.15
MSH2-201ENST00000233146 SESN3P58005 492 aa14.09□□□□□ -0.15
MSH2-201ENST00000233146 TFCP2Q12800 502 aa14.09□□□□□ -0.15
MSH2-201ENST00000233146 TNFAIP8L3Q5GJ75 292 aa14.09□□□□□ -0.15
MSH2-201ENST00000233146 SPATA24Q86W54 205 aa14.09□□□□□ -0.15
MSH2-201ENST00000233146 ECHDC2Q86YB7 292 aa14.09□□□□□ -0.15
MSH2-201ENST00000233146 SDR16C5Q8N3Y7 309 aa14.09□□□□□ -0.15
MSH2-201ENST00000233146 OLFM3Q96PB7 478 aa14.09□□□□□ -0.15
MSH2-201ENST00000233146 MAGEC2Q9UBF1 373 aaPredicted RBP14.09□□□□□ -0.15
MSH2-201ENST00000233146 ITGA6P23229 1130 aa14.08□□□□□ -0.15
MSH2-201ENST00000233146 ACVR2BQ13705 512 aa14.08□□□□□ -0.15
MSH2-201ENST00000233146 CLPPQ16740 277 aaPredicted RBP14.08□□□□□ -0.15
MSH2-201ENST00000233146 HAUS1Q96CS2 278 aa14.08□□□□□ -0.15
MSH2-201ENST00000233146 SETDB2Q96T68 719 aa14.08□□□□□ -0.15
MSH2-201ENST00000233146 IL1RAPL1Q9NZN1 696 aa14.08□□□□□ -0.15
MSH2-201ENST00000233146 ANGEL1Q9UNK9 670 aaKnown RBP14.08□□□□□ -0.15
MSH2-201ENST00000233146 ATP9BO43861 1147 aa14.08□□□□□ -0.16
MSH2-201ENST00000233146 CAPN15O75808 1086 aa14.08□□□□□ -0.16
MSH2-201ENST00000233146 ZCCHC18P0CG32 403 aa14.08□□□□□ -0.16
MSH2-201ENST00000233146 HARSP12081 509 aaKnown RBP14.08□□□□□ -0.16
MSH2-201ENST00000233146 ADARP55265 1226 aaKnown RBP14.08□□□□□ -0.16
MSH2-201ENST00000233146 HDAC4P56524 1084 aa14.08□□□□□ -0.16
MSH2-201ENST00000233146 EHHADHQ08426 723 aa14.08□□□□□ -0.16
MSH2-201ENST00000233146 TMEM259Q4ZIN3 620 aa14.08□□□□□ -0.16
MSH2-201ENST00000233146 RBM26Q5T8P6 1007 aaKnown RBP14.08□□□□□ -0.16
MSH2-201ENST00000233146 APOA5Q6Q788 366 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms