RNA–Protein interactions for RNA: ENST00000216877.10

PTPRA-201, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-201ENST00000216877 LY9Q9HBG7 655 aa15.9■□□□□ 0.14
PTPRA-201ENST00000216877 PLAGL2Q9UPG8 496 aa15.9■□□□□ 0.14
PTPRA-201ENST00000216877 FGFR4P22455 802 aa15.89■□□□□ 0.13
PTPRA-201ENST00000216877 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.89■□□□□ 0.13
PTPRA-201ENST00000216877 EAPPQ56P03 285 aaPredicted RBP15.89■□□□□ 0.13
PTPRA-201ENST00000216877 WDR66Q8TBY9 1149 aa15.89■□□□□ 0.13
PTPRA-201ENST00000216877 PXDNLA1KZ92 1463 aa15.89■□□□□ 0.13
PTPRA-201ENST00000216877 PGRMC1O00264 195 aaKnown RBP15.89■□□□□ 0.13
PTPRA-201ENST00000216877 KLHL30Q0D2K2 578 aa15.89■□□□□ 0.13
PTPRA-201ENST00000216877 MYBPC3Q14896 1274 aa15.89■□□□□ 0.13
PTPRA-201ENST00000216877 SH3RF1Q7Z6J0 888 aa15.89■□□□□ 0.13
PTPRA-201ENST00000216877 STK32AQ8WU08 396 aa15.89■□□□□ 0.13
PTPRA-201ENST00000216877 DTNBP1Q96EV8 351 aa15.89■□□□□ 0.13
PTPRA-201ENST00000216877 TBC1D2BQ9UPU7 963 aa15.89■□□□□ 0.13
PTPRA-201ENST00000216877 GNAQP50148 359 aa15.89■□□□□ 0.13
PTPRA-201ENST00000216877 MTA1Q13330 715 aa15.89■□□□□ 0.13
PTPRA-201ENST00000216877 PHC3Q8NDX5 983 aa15.89■□□□□ 0.13
PTPRA-201ENST00000216877 ARL2BPQ9Y2Y0 163 aa15.89■□□□□ 0.13
PTPRA-201ENST00000216877 NOC2LQ9Y3T9 749 aaKnown RBP15.89■□□□□ 0.13
PTPRA-201ENST00000216877 PIGWQ7Z7B1 504 aa15.88■□□□□ 0.13
PTPRA-201ENST00000216877 CRACR2BQ8N4Y2 399 aaPredicted RBP15.88■□□□□ 0.13
PTPRA-201ENST00000216877 RASGRF2O14827 1237 aa15.88■□□□□ 0.13
PTPRA-201ENST00000216877 ZFYP08048 801 aaPredicted RBP15.88■□□□□ 0.13
PTPRA-201ENST00000216877 EPHB2P29323 1055 aa15.88■□□□□ 0.13
PTPRA-201ENST00000216877 MPP3Q13368 585 aa15.88■□□□□ 0.13
PTPRA-201ENST00000216877 SFMBT2Q5VUG0 894 aa15.88■□□□□ 0.13
PTPRA-201ENST00000216877 P2RX5Q93086 422 aa15.88■□□□□ 0.13
PTPRA-201ENST00000216877 CTTNBP2NLQ9P2B4 639 aa15.88■□□□□ 0.13
PTPRA-201ENST00000216877 BAZ2BQ9UIF8 2168 aaKnown RBP15.88■□□□□ 0.13
PTPRA-201ENST00000216877 FCER1AP12319 257 aa15.88■□□□□ 0.13
PTPRA-201ENST00000216877 TAOK1Q7L7X3 1001 aa15.88■□□□□ 0.13
PTPRA-201ENST00000216877 SPIRE2Q8WWL2 714 aa15.88■□□□□ 0.13
PTPRA-201ENST00000216877 IP6K1Q92551 441 aa15.88■□□□□ 0.13
PTPRA-201ENST00000216877 STMN2Q93045 179 aa15.88■□□□□ 0.13
PTPRA-201ENST00000216877 RMDN2Q96LZ7 410 aa15.88■□□□□ 0.13
PTPRA-201ENST00000216877 CCDC87Q9NVE4 849 aa15.88■□□□□ 0.13
PTPRA-201ENST00000216877 PCDHGA4Q9Y5G9 962 aa15.88■□□□□ 0.13
PTPRA-201ENST00000216877 HOXB7P09629 217 aa15.87■□□□□ 0.13
PTPRA-201ENST00000216877 PMS2P54278 862 aa15.87■□□□□ 0.13
PTPRA-201ENST00000216877 IGDCC4Q8TDY8 1250 aa15.87■□□□□ 0.13
PTPRA-201ENST00000216877 GLG1Q92896 1179 aa15.87■□□□□ 0.13
PTPRA-201ENST00000216877 SEPT11Q9NVA2 429 aaKnown RBP15.87■□□□□ 0.13
PTPRA-201ENST00000216877 SUGT1Q9Y2Z0 365 aa15.87■□□□□ 0.13
PTPRA-201ENST00000216877 OVOS2A0A0G2JMS6 1433 aa15.87■□□□□ 0.13
PTPRA-201ENST00000216877 BICDL2A1A5D9 508 aa15.87■□□□□ 0.13
PTPRA-201ENST00000216877 FAM133AQ8N9E0 248 aa15.87■□□□□ 0.13
PTPRA-201ENST00000216877 FANCBQ8NB91 859 aa15.87■□□□□ 0.13
PTPRA-201ENST00000216877 ZFAND2BQ8WV99 257 aa15.87■□□□□ 0.13
PTPRA-201ENST00000216877 PBKQ96KB5 322 aa15.87■□□□□ 0.13
PTPRA-201ENST00000216877 CEMIPQ8WUJ3 1361 aa15.87■□□□□ 0.13
PTPRA-201ENST00000216877 ACSL3O95573 720 aa15.86■□□□□ 0.13
PTPRA-201ENST00000216877 FAM163BP0C2L3 166 aa15.86■□□□□ 0.13
PTPRA-201ENST00000216877 IL15P40933 162 aaPredicted RBP15.86■□□□□ 0.13
PTPRA-201ENST00000216877 EIF3BP55884 814 aaKnown RBP15.86■□□□□ 0.13
PTPRA-201ENST00000216877 HS2ST1Q7LGA3 356 aa15.86■□□□□ 0.13
PTPRA-201ENST00000216877 MRRFQ96E11 262 aaKnown RBP15.86■□□□□ 0.13
PTPRA-201ENST00000216877 METTL22Q9BUU2 404 aaPredicted RBP15.86■□□□□ 0.13
PTPRA-201ENST00000216877 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.86■□□□□ 0.13
PTPRA-201ENST00000216877 BAG2O95816 211 aa15.86■□□□□ 0.13
PTPRA-201ENST00000216877 FGGP02679 453 aa15.86■□□□□ 0.13
PTPRA-201ENST00000216877 PAEPP09466 180 aa15.86■□□□□ 0.13
PTPRA-201ENST00000216877 KCNMA1Q12791 1236 aa15.86■□□□□ 0.13
PTPRA-201ENST00000216877 BNIP1Q12981 228 aa15.86■□□□□ 0.13
PTPRA-201ENST00000216877 DYMQ7RTS9 669 aa15.86■□□□□ 0.13
PTPRA-201ENST00000216877 RBM12BQ8IXT5 1001 aaKnown RBP15.86■□□□□ 0.13
PTPRA-201ENST00000216877 NMD3Q96D46 503 aaKnown RBP15.86■□□□□ 0.13
PTPRA-201ENST00000216877 TSPYL2Q9H2G4 693 aaPredicted RBP15.86■□□□□ 0.13
PTPRA-201ENST00000216877 TXLNGQ9NUQ3 528 aa15.86■□□□□ 0.13
PTPRA-201ENST00000216877 BABAM1Q9NWV8 329 aa15.86■□□□□ 0.13
PTPRA-201ENST00000216877 STOML1Q9UBI4 398 aa15.86■□□□□ 0.13
PTPRA-201ENST00000216877 CPDO75976 1380 aa15.86■□□□□ 0.13
PTPRA-201ENST00000216877 SCN11AQ9UI33 1791 aa15.86■□□□□ 0.13
PTPRA-201ENST00000216877 H7C1W4 665 aa15.86■□□□□ 0.13
PTPRA-201ENST00000216877 TNIP1Q15025 636 aa15.86■□□□□ 0.13
PTPRA-201ENST00000216877 LONRF1Q17RB8 773 aa15.86■□□□□ 0.13
PTPRA-201ENST00000216877 ZC2HC1CQ53FD0 456 aaPredicted RBP15.86■□□□□ 0.13
PTPRA-201ENST00000216877 RASGRP4Q8TDF6 673 aa15.86■□□□□ 0.13
PTPRA-201ENST00000216877 RBM17Q96I25 401 aaKnown RBP15.86■□□□□ 0.13
PTPRA-201ENST00000216877 TGS1Q96RS0 853 aaKnown RBP15.86■□□□□ 0.13
PTPRA-201ENST00000216877 UBR2Q8IWV8 1755 aa15.86■□□□□ 0.13
PTPRA-201ENST00000216877 FGFR1OPO95684 399 aaKnown RBP15.85■□□□□ 0.13
PTPRA-201ENST00000216877 RFX5P48382 616 aaPredicted RBP15.85■□□□□ 0.13
PTPRA-201ENST00000216877 RCN1Q15293 331 aa15.85■□□□□ 0.13
PTPRA-201ENST00000216877 AMOTQ4VCS5 1084 aa15.85■□□□□ 0.13
PTPRA-201ENST00000216877 ISLR2Q6UXK2 745 aa15.85■□□□□ 0.13
PTPRA-201ENST00000216877 SCYL3Q8IZE3 742 aa15.85■□□□□ 0.13
PTPRA-201ENST00000216877 INPP4AQ96PE3 977 aaPredicted RBP15.85■□□□□ 0.13
PTPRA-201ENST00000216877 CYTH2Q99418 400 aa15.85■□□□□ 0.13
PTPRA-201ENST00000216877 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.85■□□□□ 0.134e-6■■■■□ 23.7
PTPRA-201ENST00000216877 A0A1W2PRG0 241 aa15.85■□□□□ 0.13
PTPRA-201ENST00000216877 TMEM120BA0PK00 339 aa15.85■□□□□ 0.13
PTPRA-201ENST00000216877 GRID2IPA4D2P6 1211 aa15.85■□□□□ 0.13
PTPRA-201ENST00000216877 BMP15O95972 392 aa15.85■□□□□ 0.13
PTPRA-201ENST00000216877 TPBGLP0DKB5 382 aa15.85■□□□□ 0.13
PTPRA-201ENST00000216877 SNX30Q5VWJ9 437 aa15.85■□□□□ 0.13
PTPRA-201ENST00000216877 ZNF662Q6ZS27 426 aa15.85■□□□□ 0.13
PTPRA-201ENST00000216877 PITPNM3Q9BZ71 974 aa15.85■□□□□ 0.13
PTPRA-201ENST00000216877 ARHGEF3Q9NR81 526 aa15.85■□□□□ 0.13
PTPRA-201ENST00000216877 NMRK1Q9NWW6 199 aa15.85■□□□□ 0.13
PTPRA-201ENST00000216877 CYP39A1Q9NYL5 469 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms