RNA–Protein interactions for RNA: ENST00000216294.4

SNAPC1-201, Transcript of small nuclear RNA activating complex polypeptide 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC1, Length 2,656 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC1-201ENST00000216294 PCNTO95613 3336 aa17.36■□□□□ 0.37
SNAPC1-201ENST00000216294 YDJCA8MPS7 323 aa17.36■□□□□ 0.37
SNAPC1-201ENST00000216294 GOLGA8KD6RF30 607 aa17.36■□□□□ 0.37
SNAPC1-201ENST00000216294 PPIP5K2O43314 1243 aa17.36■□□□□ 0.37
SNAPC1-201ENST00000216294 CEP104O60308 925 aa17.36■□□□□ 0.37
SNAPC1-201ENST00000216294 NR2F2P24468 414 aa17.36■□□□□ 0.37
SNAPC1-201ENST00000216294 ERVK-9P63128 1117 aa17.36■□□□□ 0.37
SNAPC1-201ENST00000216294 SLC18A3Q16572 532 aa17.36■□□□□ 0.37
SNAPC1-201ENST00000216294 COBLL1Q53SF7 1204 aa17.36■□□□□ 0.37
SNAPC1-201ENST00000216294 MEI1Q5TIA1 1274 aa17.36■□□□□ 0.37
SNAPC1-201ENST00000216294 EMBQ6PCB8 327 aa17.36■□□□□ 0.37
SNAPC1-201ENST00000216294 TRIM59Q8IWR1 403 aa17.36■□□□□ 0.37
SNAPC1-201ENST00000216294 RBM46Q8TBY0 533 aaKnown RBP17.36■□□□□ 0.37
SNAPC1-201ENST00000216294 PSTPIP2Q9H939 334 aa17.36■□□□□ 0.37
SNAPC1-201ENST00000216294 GDF3Q9NR23 364 aa17.36■□□□□ 0.37
SNAPC1-201ENST00000216294 TTLL1O95922 423 aa17.35■□□□□ 0.37
SNAPC1-201ENST00000216294 MYBP10242 640 aa17.35■□□□□ 0.37
SNAPC1-201ENST00000216294 SH3BP5LQ7L8J4 393 aa17.35■□□□□ 0.37
SNAPC1-201ENST00000216294 IFT20Q8IY31 132 aa17.35■□□□□ 0.37
SNAPC1-201ENST00000216294 IQCKQ8N0W5 287 aa17.35■□□□□ 0.37
SNAPC1-201ENST00000216294 INPP4AQ96PE3 977 aaPredicted RBP17.35■□□□□ 0.37
SNAPC1-201ENST00000216294 KCTD10Q9H3F6 313 aa17.35■□□□□ 0.37
SNAPC1-201ENST00000216294 BCCIPQ9P287 314 aaKnown RBP eCLIP17.35■□□□□ 0.37
SNAPC1-201ENST00000216294 OPA1O60313 960 aa17.35■□□□□ 0.37
SNAPC1-201ENST00000216294 FGFR1OPO95684 399 aaKnown RBP17.35■□□□□ 0.37
SNAPC1-201ENST00000216294 CYP11B2P19099 503 aa17.35■□□□□ 0.37
SNAPC1-201ENST00000216294 HOXD13P35453 343 aa17.35■□□□□ 0.37
SNAPC1-201ENST00000216294 PDIA5Q14554 519 aa17.35■□□□□ 0.37
SNAPC1-201ENST00000216294 ASIC2Q16515 512 aa17.35■□□□□ 0.37
SNAPC1-201ENST00000216294 CEP85LQ5SZL2 805 aa17.35■□□□□ 0.37
SNAPC1-201ENST00000216294 CYP2W1Q8TAV3 490 aa17.35■□□□□ 0.37
SNAPC1-201ENST00000216294 PPM1EQ8WY54 764 aa17.35■□□□□ 0.37
SNAPC1-201ENST00000216294 CELF4Q9BZC1 486 aaKnown RBP17.35■□□□□ 0.37
SNAPC1-201ENST00000216294 RAB34Q9BZG1 259 aa17.35■□□□□ 0.37
SNAPC1-201ENST00000216294 TRIM31Q9BZY9 425 aa17.35■□□□□ 0.37
SNAPC1-201ENST00000216294 PLAAQ9Y263 795 aa17.35■□□□□ 0.37
SNAPC1-201ENST00000216294 SSU72P8A0A1W2PR75 194 aa17.34■□□□□ 0.37
SNAPC1-201ENST00000216294 ZBTB39O15060 712 aa17.34■□□□□ 0.37
SNAPC1-201ENST00000216294 USH1GQ495M9 461 aa17.34■□□□□ 0.37
SNAPC1-201ENST00000216294 CAVIN3Q969G5 261 aa17.34■□□□□ 0.37
SNAPC1-201ENST00000216294 GANQ9H2C0 597 aa17.34■□□□□ 0.37
SNAPC1-201ENST00000216294 RIC8AQ9NPQ8 531 aa17.34■□□□□ 0.37
SNAPC1-201ENST00000216294 HDAC9Q9UKV0 1011 aa17.34■□□□□ 0.37
SNAPC1-201ENST00000216294 MYO1FO00160 1098 aa17.34■□□□□ 0.37
SNAPC1-201ENST00000216294 PPP1R2P41236 205 aa17.34■□□□□ 0.37
SNAPC1-201ENST00000216294 FKBP1AP62942 108 aaKnown RBP17.34■□□□□ 0.37
SNAPC1-201ENST00000216294 ZNF543Q08ER8 600 aa17.34■□□□□ 0.37
SNAPC1-201ENST00000216294 TDRD3Q9H7E2 651 aaKnown RBP17.34■□□□□ 0.37
SNAPC1-201ENST00000216294 PPANQ9NQ55 473 aaKnown RBP17.34■□□□□ 0.37
SNAPC1-201ENST00000216294 PNMA6FA0A0J9YX94 578 aa17.34■□□□□ 0.37
SNAPC1-201ENST00000216294 SHTN1A0MZ66 631 aa17.34■□□□□ 0.37
SNAPC1-201ENST00000216294 PRR16Q569H4 304 aa17.34■□□□□ 0.37
SNAPC1-201ENST00000216294 USP38Q8NB14 1042 aa17.34■□□□□ 0.37
SNAPC1-201ENST00000216294 CUL5Q93034 780 aa17.34■□□□□ 0.37
SNAPC1-201ENST00000216294 ESYT2A0FGR8 921 aa17.33■□□□□ 0.36
SNAPC1-201ENST00000216294 DCDC2CA8MYV0 355 aa17.33■□□□□ 0.36
SNAPC1-201ENST00000216294 RBAK-RBAKDNI3L0D1 243 aa17.33■□□□□ 0.36
SNAPC1-201ENST00000216294 ERLIN2O94905 339 aa17.33■□□□□ 0.36
SNAPC1-201ENST00000216294 SNHG28P0DPA3 235 aa17.33■□□□□ 0.36
SNAPC1-201ENST00000216294 TMOD1P28289 359 aa17.33■□□□□ 0.36
SNAPC1-201ENST00000216294 ITIH3Q06033 890 aa17.33■□□□□ 0.36
SNAPC1-201ENST00000216294 ASPRV1Q53RT3 343 aa17.33■□□□□ 0.36
SNAPC1-201ENST00000216294 IRF2BP2Q7Z5L9 587 aa17.33■□□□□ 0.36
SNAPC1-201ENST00000216294 SFR1Q86XK3 245 aa17.33■□□□□ 0.36
SNAPC1-201ENST00000216294 SPAG5Q96R06 1193 aa17.33■□□□□ 0.36
SNAPC1-201ENST00000216294 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.33■□□□□ 0.362e-6■■■■■ 149.1
SNAPC1-201ENST00000216294 NR2E1Q9Y466 385 aa17.33■□□□□ 0.36
SNAPC1-201ENST00000216294 MYO3BQ8WXR4 1341 aa17.33■□□□□ 0.36
SNAPC1-201ENST00000216294 CLK2P49760 499 aaKnown RBP17.33■□□□□ 0.36
SNAPC1-201ENST00000216294 CATSPER3Q86XQ3 398 aa17.33■□□□□ 0.36
SNAPC1-201ENST00000216294 EFCAB13Q8IY85 973 aa17.33■□□□□ 0.36
SNAPC1-201ENST00000216294 RNF10Q8N5U6 811 aaKnown RBP17.33■□□□□ 0.36
SNAPC1-201ENST00000216294 CHORDC1Q9UHD1 332 aaPredicted RBP17.33■□□□□ 0.36
SNAPC1-201ENST00000216294 AMACRQ9UHK6 382 aa17.33■□□□□ 0.36
SNAPC1-201ENST00000216294 SERPINA10Q9UK55 444 aa17.33■□□□□ 0.36
SNAPC1-201ENST00000216294 ZNF646O15015 1829 aaPredicted RBP17.33■□□□□ 0.36
SNAPC1-201ENST00000216294 LSP1P33241 339 aa17.32■□□□□ 0.36
SNAPC1-201ENST00000216294 HDLBPQ00341 1268 aaKnown RBP17.32■□□□□ 0.36
SNAPC1-201ENST00000216294 ALS2CLQ60I27 953 aa17.32■□□□□ 0.36
SNAPC1-201ENST00000216294 MRIQ9BWK5 157 aa17.32■□□□□ 0.36
SNAPC1-201ENST00000216294 IDI2Q9BXS1 227 aa17.32■□□□□ 0.36
SNAPC1-201ENST00000216294 AKAP3O75969 853 aa17.32■□□□□ 0.36
SNAPC1-201ENST00000216294 NR1D1P20393 614 aa17.32■□□□□ 0.36
SNAPC1-201ENST00000216294 ECHS1P30084 290 aa17.32■□□□□ 0.36
SNAPC1-201ENST00000216294 RPS6KA1Q15418 735 aa17.32■□□□□ 0.36
SNAPC1-201ENST00000216294 UAP1Q16222 522 aaPredicted RBP17.32■□□□□ 0.36
SNAPC1-201ENST00000216294 QRICH1Q2TAL8 776 aa17.32■□□□□ 0.36
SNAPC1-201ENST00000216294 REEP2Q9BRK0 252 aa17.32■□□□□ 0.36
SNAPC1-201ENST00000216294 DPH5Q9H2P9 285 aa17.32■□□□□ 0.36
SNAPC1-201ENST00000216294 OSGEPQ9NPF4 335 aa17.32■□□□□ 0.36
SNAPC1-201ENST00000216294 BMP2KQ9NSY1 1161 aaPredicted RBP17.32■□□□□ 0.36
SNAPC1-201ENST00000216294 PCDHB13Q9Y5F0 798 aa17.32■□□□□ 0.36
SNAPC1-201ENST00000216294 PCDHGC5Q9Y5F6 944 aa17.32■□□□□ 0.36
SNAPC1-201ENST00000216294 C10orf71Q711Q0 1435 aa17.31■□□□□ 0.36
SNAPC1-201ENST00000216294 A0A087WUV0 522 aaPredicted RBP17.31■□□□□ 0.36
SNAPC1-201ENST00000216294 UCHL3P15374 230 aa17.31■□□□□ 0.36
SNAPC1-201ENST00000216294 IBSPP21815 317 aaPredicted RBP17.31■□□□□ 0.36
SNAPC1-201ENST00000216294 SMARCA1P28370 1054 aa17.31■□□□□ 0.36
SNAPC1-201ENST00000216294 HOXA13P31271 388 aaPredicted RBP17.31■□□□□ 0.36
SNAPC1-201ENST00000216294 PAK2Q13177 524 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms