RNA–Protein interactions for RNA: ENST00000066544.7

CDC27-201, Transcript of cell division cycle 27, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDC27, Length 5,801 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-201ENST00000066544 PJA2O43164 708 aa9.08□□□□□ -0.96
CDC27-201ENST00000066544 JAG1P78504 1218 aa9.08□□□□□ -0.96
CDC27-201ENST00000066544 NAB2Q15742 525 aa9.08□□□□□ -0.96
CDC27-201ENST00000066544 IFT20Q8IY31 132 aa9.08□□□□□ -0.96
CDC27-201ENST00000066544 MYCT1Q8N699 235 aa9.08□□□□□ -0.96
CDC27-201ENST00000066544 LCA5LO95447 670 aa9.08□□□□□ -0.96
CDC27-201ENST00000066544 TRIM49P0CI25 452 aa9.08□□□□□ -0.96
CDC27-201ENST00000066544 TRIM49CP0CI26 452 aa9.08□□□□□ -0.96
CDC27-201ENST00000066544 SF3A3Q12874 501 aaKnown RBP eCLIP9.08□□□□□ -0.961e-6■■■■□ 20.6
CDC27-201ENST00000066544 KNOP1Q1ED39 458 aaKnown RBP9.08□□□□□ -0.96
CDC27-201ENST00000066544 TTMPQ5BVD1 217 aa9.08□□□□□ -0.96
CDC27-201ENST00000066544 SP8Q8IXZ3 490 aa9.08□□□□□ -0.96
CDC27-201ENST00000066544 CASKIN2Q8WXE0 1202 aa9.08□□□□□ -0.96
CDC27-201ENST00000066544 GANQ9H2C0 597 aa9.08□□□□□ -0.96
CDC27-201ENST00000066544 GCNT4Q9P109 453 aa9.08□□□□□ -0.96
CDC27-201ENST00000066544 ATF5Q9Y2D1 282 aaPredicted RBP9.08□□□□□ -0.96
CDC27-201ENST00000066544 MYH7BA7E2Y1 1941 aa9.08□□□□□ -0.96
CDC27-201ENST00000066544 PPFIA4O75335 1185 aa9.07□□□□□ -0.96
CDC27-201ENST00000066544 AFPP02771 609 aaKnown RBP9.07□□□□□ -0.96
CDC27-201ENST00000066544 NR3C1P04150 777 aa9.07□□□□□ -0.96
CDC27-201ENST00000066544 SPATA31C1P0DKV0 1188 aa9.07□□□□□ -0.96
CDC27-201ENST00000066544 SLC12A3P55017 1021 aa9.07□□□□□ -0.96
CDC27-201ENST00000066544 COG2Q14746 738 aa9.07□□□□□ -0.96
CDC27-201ENST00000066544 LLGL1Q15334 1064 aa9.07□□□□□ -0.96
CDC27-201ENST00000066544 ARHGAP44Q17R89 818 aa9.07□□□□□ -0.96
CDC27-201ENST00000066544 KCNMB3Q9NPA1 279 aa9.07□□□□□ -0.96
CDC27-201ENST00000066544 SCAF8Q9UPN6 1271 aaKnown RBP9.07□□□□□ -0.96
CDC27-201ENST00000066544 HOXD13P35453 343 aa9.07□□□□□ -0.96
CDC27-201ENST00000066544 RNF10Q8N5U6 811 aaKnown RBP9.07□□□□□ -0.96
CDC27-201ENST00000066544 MSL3Q8N5Y2 521 aaKnown RBP9.07□□□□□ -0.96
CDC27-201ENST00000066544 CRAMP1Q96RY5 1269 aa9.07□□□□□ -0.96
CDC27-201ENST00000066544 MSH4O15457 936 aa9.07□□□□□ -0.96
CDC27-201ENST00000066544 ITGA4P13612 1032 aa9.07□□□□□ -0.96
CDC27-201ENST00000066544 HOXA10P31260 410 aaPredicted RBP9.07□□□□□ -0.96
CDC27-201ENST00000066544 COPB2P35606 906 aa9.07□□□□□ -0.96
CDC27-201ENST00000066544 NNTQ13423 1086 aa9.07□□□□□ -0.96
CDC27-201ENST00000066544 PPP1R18Q6NYC8 613 aa9.07□□□□□ -0.96
CDC27-201ENST00000066544 SH3BP5LQ7L8J4 393 aa9.07□□□□□ -0.96
CDC27-201ENST00000066544 RBM46Q8TBY0 533 aaKnown RBP9.07□□□□□ -0.96
CDC27-201ENST00000066544 CHORDC1Q9UHD1 332 aaPredicted RBP9.07□□□□□ -0.96
CDC27-201ENST00000066544 BTAF1O14981 1849 aa9.07□□□□□ -0.96
CDC27-201ENST00000066544 ABCB11O95342 1321 aa9.07□□□□□ -0.96
CDC27-201ENST00000066544 BACH1O14867 736 aa9.07□□□□□ -0.96
CDC27-201ENST00000066544 LRRN2O75325 713 aa9.07□□□□□ -0.96
CDC27-201ENST00000066544 PON1P27169 355 aa9.07□□□□□ -0.96
CDC27-201ENST00000066544 ECE1P42892 770 aa9.07□□□□□ -0.96
CDC27-201ENST00000066544 LIG3P49916 1009 aa9.07□□□□□ -0.96
CDC27-201ENST00000066544 ABCB5Q2M3G0 1257 aa9.07□□□□□ -0.96
CDC27-201ENST00000066544 DPH5Q9H2P9 285 aa9.07□□□□□ -0.96
CDC27-201ENST00000066544 OPA1O60313 960 aa9.07□□□□□ -0.96
CDC27-201ENST00000066544 FAM13AO94988 1023 aa9.07□□□□□ -0.96
CDC27-201ENST00000066544 GNA14O95837 355 aa9.07□□□□□ -0.96
CDC27-201ENST00000066544 PRLRP16471 622 aa9.07□□□□□ -0.96
CDC27-201ENST00000066544 GUCY1A3Q02108 690 aa9.07□□□□□ -0.96
CDC27-201ENST00000066544 CEP85LQ5SZL2 805 aa9.07□□□□□ -0.96
CDC27-201ENST00000066544 EMBQ6PCB8 327 aa9.07□□□□□ -0.96
CDC27-201ENST00000066544 SIAH1Q8IUQ4 282 aa9.07□□□□□ -0.96
CDC27-201ENST00000066544 EDEM3Q9BZQ6 932 aa9.07□□□□□ -0.96
CDC27-201ENST00000066544 NAGPAQ9UK23 515 aa9.07□□□□□ -0.96
CDC27-201ENST00000066544 RABGAP1Q9Y3P9 1069 aa9.07□□□□□ -0.96
CDC27-201ENST00000066544 SMCHD1A6NHR9 2005 aa9.06□□□□□ -0.96
CDC27-201ENST00000066544 CLRN2A0PK11 232 aa9.06□□□□□ -0.96
CDC27-201ENST00000066544 PPFIA1Q13136 1202 aa9.06□□□□□ -0.96
CDC27-201ENST00000066544 PAK2Q13177 524 aa9.06□□□□□ -0.96
CDC27-201ENST00000066544 PEX26Q7Z412 305 aa9.06□□□□□ -0.96
CDC27-201ENST00000066544 INPP4AQ96PE3 977 aaPredicted RBP9.06□□□□□ -0.96
CDC27-201ENST00000066544 NUCKS1Q9H1E3 243 aaKnown RBP9.06□□□□□ -0.96
CDC27-201ENST00000066544 FAM198AQ9UFP1 575 aa9.06□□□□□ -0.96
CDC27-201ENST00000066544 MAST2Q6P0Q8 1798 aa9.06□□□□□ -0.96
CDC27-201ENST00000066544 IRF2BP2Q7Z5L9 587 aa9.06□□□□□ -0.96
CDC27-201ENST00000066544 DAAM2Q86T65 1068 aa9.06□□□□□ -0.96
CDC27-201ENST00000066544 GLYCTKQ8IVS8 523 aa9.06□□□□□ -0.96
CDC27-201ENST00000066544 SLFN12Q8IYM2 578 aa9.06□□□□□ -0.96
CDC27-201ENST00000066544 CCDC17Q96LX7 622 aa9.06□□□□□ -0.96
CDC27-201ENST00000066544 ZBTB21Q9ULJ3 1066 aa9.06□□□□□ -0.96
CDC27-201ENST00000066544 MMP10P09238 476 aa9.06□□□□□ -0.96
CDC27-201ENST00000066544 EPB41P11171 864 aaKnown RBP9.06□□□□□ -0.96
CDC27-201ENST00000066544 USP8P40818 1118 aa9.06□□□□□ -0.96
CDC27-201ENST00000066544 USP11P51784 963 aa9.06□□□□□ -0.96
CDC27-201ENST00000066544 PDE4CQ08493 712 aa9.06□□□□□ -0.96
CDC27-201ENST00000066544 MEI1Q5TIA1 1274 aa9.06□□□□□ -0.96
CDC27-201ENST00000066544 MICALL1Q8N3F8 863 aa9.06□□□□□ -0.96
CDC27-201ENST00000066544 ETNPPLQ8TBG4 499 aa9.06□□□□□ -0.96
CDC27-201ENST00000066544 EIF2AK1Q9BQI3 630 aaKnown RBP9.06□□□□□ -0.96
CDC27-201ENST00000066544 CELF4Q9BZC1 486 aaKnown RBP9.06□□□□□ -0.96
CDC27-201ENST00000066544 PI4KBQ9UBF8 816 aa9.06□□□□□ -0.96
CDC27-201ENST00000066544 A0A1W2PRG0 241 aa9.06□□□□□ -0.96
CDC27-201ENST00000066544 NDUFAB1O14561 156 aa9.06□□□□□ -0.96
CDC27-201ENST00000066544 KIF4AO95239 1232 aa9.06□□□□□ -0.96
CDC27-201ENST00000066544 ADRA2BP18089 450 aa9.06□□□□□ -0.96
CDC27-201ENST00000066544 SPIRE1Q08AE8 756 aa9.06□□□□□ -0.96
CDC27-201ENST00000066544 DYDC2Q96IM9 177 aa9.06□□□□□ -0.96
CDC27-201ENST00000066544 OSGEPQ9NPF4 335 aa9.06□□□□□ -0.96
CDC27-201ENST00000066544 AMACRQ9UHK6 382 aa9.06□□□□□ -0.96
CDC27-201ENST00000066544 TCP10L2B9ZVM9 353 aa9.06□□□□□ -0.96
CDC27-201ENST00000066544 H2AFZP0C0S5 128 aa9.06□□□□□ -0.96
CDC27-201ENST00000066544 BMP3P12645 472 aa9.06□□□□□ -0.96
CDC27-201ENST00000066544 SYDE2Q5VT97 1194 aa9.06□□□□□ -0.96
CDC27-201ENST00000066544 GBP6Q6ZN66 633 aa9.06□□□□□ -0.96
CDC27-201ENST00000066544 H2AFVQ71UI9 128 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms