RNA–Protein interactions for RNA: ENST00000054950.3

RCN1-201, Transcript of reticulocalbin 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RCN1, Length 2,572 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCN1-201ENST00000054950 MYZAPP0CAP1 466 aa22.15■■□□□ 1.14
RCN1-201ENST00000054950 TAL1P17542 331 aaPredicted RBP22.15■■□□□ 1.14
RCN1-201ENST00000054950 KCNA1Q09470 495 aa22.15■■□□□ 1.14
RCN1-201ENST00000054950 SHROOM1Q2M3G4 852 aaPredicted RBP22.15■■□□□ 1.14
RCN1-201ENST00000054950 TRIM31Q9BZY9 425 aa22.15■■□□□ 1.14
RCN1-201ENST00000054950 DPH5Q9H2P9 285 aa22.15■■□□□ 1.14
RCN1-201ENST00000054950 CNOT8Q9UFF9 292 aaKnown RBP22.15■■□□□ 1.14
RCN1-201ENST00000054950 DAGLAQ9Y4D2 1042 aa22.15■■□□□ 1.14
RCN1-201ENST00000054950 A6NNZ2 444 aa22.15■■□□□ 1.14
RCN1-201ENST00000054950 KRIT1O00522 736 aa22.15■■□□□ 1.14
RCN1-201ENST00000054950 MPHOSPH10O00566 681 aaKnown RBP22.15■■□□□ 1.14
RCN1-201ENST00000054950 TTI1O43156 1089 aa22.15■■□□□ 1.14
RCN1-201ENST00000054950 AKAP3O75969 853 aa22.15■■□□□ 1.14
RCN1-201ENST00000054950 QPCTQ16769 361 aa22.15■■□□□ 1.14
RCN1-201ENST00000054950 SPRED3Q2MJR0 410 aa22.15■■□□□ 1.14
RCN1-201ENST00000054950 TUBB8Q3ZCM7 444 aa22.15■■□□□ 1.14
RCN1-201ENST00000054950 DHX36Q9H2U1 1008 aaKnown RBP22.15■■□□□ 1.14
RCN1-201ENST00000054950 ARMCX3Q9UH62 379 aaPredicted RBP22.15■■□□□ 1.14
RCN1-201ENST00000054950 PGRMC1O00264 195 aaKnown RBP22.14■■□□□ 1.14
RCN1-201ENST00000054950 CLIC2O15247 247 aa22.14■■□□□ 1.14
RCN1-201ENST00000054950 SNAP25P60880 206 aa22.14■■□□□ 1.14
RCN1-201ENST00000054950 EXOC3L4Q17RC7 722 aa22.14■■□□□ 1.14
RCN1-201ENST00000054950 AFPP02771 609 aaKnown RBP22.14■■□□□ 1.13
RCN1-201ENST00000054950 COPB2P35606 906 aa22.14■■□□□ 1.13
RCN1-201ENST00000054950 EMC10Q5UCC4 262 aa22.14■■□□□ 1.13
RCN1-201ENST00000054950 PEX26Q7Z412 305 aa22.14■■□□□ 1.13
RCN1-201ENST00000054950 ADAT2Q7Z6V5 191 aaKnown RBP22.14■■□□□ 1.13
RCN1-201ENST00000054950 ZC3H3Q8IXZ2 948 aaKnown RBP22.14■■□□□ 1.13
RCN1-201ENST00000054950 CYFIP2Q96F07 1278 aa22.14■■□□□ 1.13
RCN1-201ENST00000054950 P2RX7Q99572 595 aaKnown RBP22.14■■□□□ 1.13
RCN1-201ENST00000054950 REEP2Q9BRK0 252 aa22.14■■□□□ 1.13
RCN1-201ENST00000054950 NR2E1Q9Y466 385 aa22.14■■□□□ 1.13
RCN1-201ENST00000054950 TTLL1O95922 423 aa22.13■■□□□ 1.13
RCN1-201ENST00000054950 FAM107AO95990 144 aa22.13■■□□□ 1.13
RCN1-201ENST00000054950 PLCG2P16885 1265 aa22.13■■□□□ 1.13
RCN1-201ENST00000054950 MRPL12P52815 198 aaKnown RBP22.13■■□□□ 1.13
RCN1-201ENST00000054950 GABPAQ06546 454 aa22.13■■□□□ 1.13
RCN1-201ENST00000054950 SF3B2Q13435 895 aaKnown RBP22.13■■□□□ 1.13
RCN1-201ENST00000054950 CHADLQ6NUI6 762 aa22.13■■□□□ 1.13
RCN1-201ENST00000054950 CATSPER3Q86XQ3 398 aa22.13■■□□□ 1.13
RCN1-201ENST00000054950 ACTRT1Q8TDG2 376 aa22.13■■□□□ 1.13
RCN1-201ENST00000054950 IGKV6D-41A0A0C4DH26 115 aa22.13■■□□□ 1.13
RCN1-201ENST00000054950 ZBTB5O15062 677 aa22.13■■□□□ 1.13
RCN1-201ENST00000054950 FSBPO95073 299 aa22.13■■□□□ 1.13
RCN1-201ENST00000054950 GIT2Q14161 759 aa22.13■■□□□ 1.13
RCN1-201ENST00000054950 PBKQ96KB5 322 aa22.13■■□□□ 1.13
RCN1-201ENST00000054950 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.13■■□□□ 1.13
RCN1-201ENST00000054950 TRIM51Q9BSJ1 452 aa22.13■■□□□ 1.13
RCN1-201ENST00000054950 OSGEPQ9NPF4 335 aa22.13■■□□□ 1.13
RCN1-201ENST00000054950 ATF5Q9Y2D1 282 aaPredicted RBP22.13■■□□□ 1.13
RCN1-201ENST00000054950 CYP4A11Q02928 519 aa22.12■■□□□ 1.13
RCN1-201ENST00000054950 DAAM2Q86T65 1068 aa22.12■■□□□ 1.13
RCN1-201ENST00000054950 CNBD1Q8NA66 436 aa22.12■■□□□ 1.13
RCN1-201ENST00000054950 U2AF1L4Q8WU68 220 aaKnown RBP22.12■■□□□ 1.13
RCN1-201ENST00000054950 MXD3Q9BW11 206 aa22.12■■□□□ 1.13
RCN1-201ENST00000054950 SIX2Q9NPC8 291 aa22.12■■□□□ 1.13
RCN1-201ENST00000054950 SLC12A6Q9UHW9 1150 aa22.12■■□□□ 1.13
RCN1-201ENST00000054950 NOVA2Q9UNW9 492 aaKnown RBP22.12■■□□□ 1.13
RCN1-201ENST00000054950 DDX3XO00571 662 aaKnown RBP eCLIP22.12■■□□□ 1.136e-11■□□□□ 10.4
RCN1-201ENST00000054950 GFPT2O94808 682 aa22.12■■□□□ 1.13
RCN1-201ENST00000054950 IRX3P78415 501 aaPredicted RBP22.12■■□□□ 1.13
RCN1-201ENST00000054950 EDRF1Q3B7T1 1238 aa22.12■■□□□ 1.13
RCN1-201ENST00000054950 ODF2Q5BJF6 829 aa22.12■■□□□ 1.13
RCN1-201ENST00000054950 SLC30A10Q6XR72 485 aa22.12■■□□□ 1.13
RCN1-201ENST00000054950 KCNMB3Q9NPA1 279 aa22.12■■□□□ 1.13
RCN1-201ENST00000054950 FRMD3A2A2Y4 597 aa22.11■■□□□ 1.13
RCN1-201ENST00000054950 SFI1A8K8P3 1242 aa22.11■■□□□ 1.13
RCN1-201ENST00000054950 XRCC5P13010 732 aaKnown RBP22.11■■□□□ 1.13
RCN1-201ENST00000054950 POLD1P28340 1107 aa22.11■■□□□ 1.13
RCN1-201ENST00000054950 GTF2IP78347 998 aa22.11■■□□□ 1.13
RCN1-201ENST00000054950 SF3A3Q12874 501 aaKnown RBP eCLIP22.11■■□□□ 1.13
RCN1-201ENST00000054950 CUL1Q13616 776 aa22.11■■□□□ 1.13
RCN1-201ENST00000054950 EPHA7Q15375 998 aa22.11■■□□□ 1.13
RCN1-201ENST00000054950 PRR16Q569H4 304 aa22.11■■□□□ 1.13
RCN1-201ENST00000054950 GCNT4Q9P109 453 aa22.11■■□□□ 1.13
RCN1-201ENST00000054950 POLLQ9UGP5 575 aa22.11■■□□□ 1.13
RCN1-201ENST00000054950 CCNL1Q9UK58 526 aaPredicted RBP22.11■■□□□ 1.13
RCN1-201ENST00000054950 GAKO14976 1311 aa22.11■■□□□ 1.13
RCN1-201ENST00000054950 ATXN2Q99700 1313 aaKnown RBP22.11■■□□□ 1.13
RCN1-201ENST00000054950 BTNL10A8MVZ5 291 aa22.11■■□□□ 1.13
RCN1-201ENST00000054950 IL1R1P14778 569 aa22.11■■□□□ 1.13
RCN1-201ENST00000054950 KNOP1Q1ED39 458 aaKnown RBP22.11■■□□□ 1.13
RCN1-201ENST00000054950 ANO3Q9BYT9 981 aa22.11■■□□□ 1.13
RCN1-201ENST00000054950 GGA1Q9UJY5 639 aa22.11■■□□□ 1.13
RCN1-201ENST00000054950 PCDHB13Q9Y5F0 798 aa22.11■■□□□ 1.13
RCN1-201ENST00000054950 PLIN4Q96Q06 1357 aa22.11■■□□□ 1.13
RCN1-201ENST00000054950 FAM196BA6NMK8 535 aa22.1■■□□□ 1.13
RCN1-201ENST00000054950 QRICH1Q2TAL8 776 aa22.1■■□□□ 1.13
RCN1-201ENST00000054950 PPP1R18Q6NYC8 613 aa22.1■■□□□ 1.13
RCN1-201ENST00000054950 LRIG3Q6UXM1 1119 aa22.1■■□□□ 1.13
RCN1-201ENST00000054950 CCDC13Q8IYE1 715 aa22.1■■□□□ 1.13
RCN1-201ENST00000054950 RPGRQ92834 1020 aaKnown RBP22.1■■□□□ 1.13
RCN1-201ENST00000054950 CD248Q9HCU0 757 aa22.1■■□□□ 1.13
RCN1-201ENST00000054950 GCFC2P16383 781 aaKnown RBP22.1■■□□□ 1.13
RCN1-201ENST00000054950 PDE4CQ08493 712 aa22.1■■□□□ 1.13
RCN1-201ENST00000054950 MICALCLQ6ZW33 695 aa22.1■■□□□ 1.13
RCN1-201ENST00000054950 CABS1Q96KC9 395 aa22.1■■□□□ 1.13
RCN1-201ENST00000054950 PAGR1Q9BTK6 254 aa22.1■■□□□ 1.13
RCN1-201ENST00000054950 DDX20Q9UHI6 824 aaKnown RBP22.1■■□□□ 1.13
RCN1-201ENST00000054950 ASTN1O14525 1302 aa22.09■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms