RNA–Protein interactions for RNA: ENST00000009180.8

CD9-201, Transcript of CD9 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD9, Length 1,169 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-201ENST00000009180 SRPRBQ9Y5M8 271 aaKnown RBP11.3□□□□□ -0.6
CD9-201ENST00000009180 MAFBQ9Y5Q3 323 aaPredicted RBP11.3□□□□□ -0.6
CD9-201ENST00000009180 KIAA0100Q14667 2235 aaKnown RBP11.29□□□□□ -0.6
CD9-201ENST00000009180 SLITRK3O94933 977 aa11.29□□□□□ -0.6
CD9-201ENST00000009180 STBD1O95210 358 aa11.29□□□□□ -0.6
CD9-201ENST00000009180 OATP04181 439 aa11.29□□□□□ -0.6
CD9-201ENST00000009180 P4HBP07237 508 aaKnown RBP11.29□□□□□ -0.6
CD9-201ENST00000009180 SPATA31C1P0DKV0 1188 aa11.29□□□□□ -0.6
CD9-201ENST00000009180 SMIM10L2AP0DMW4 78 aa11.29□□□□□ -0.6
CD9-201ENST00000009180 SMIM10L2BP0DMW5 78 aa11.29□□□□□ -0.6
CD9-201ENST00000009180 CCT6AP40227 531 aaKnown RBP11.29□□□□□ -0.6
CD9-201ENST00000009180 QARSP47897 775 aaKnown RBP11.29□□□□□ -0.6
CD9-201ENST00000009180 PSMC5P62195 406 aa11.29□□□□□ -0.6
CD9-201ENST00000009180 IGBP1P78318 339 aa11.29□□□□□ -0.6
CD9-201ENST00000009180 ZNF200P98182 395 aaPredicted RBP11.29□□□□□ -0.6
CD9-201ENST00000009180 ZRSR1Q15695 479 aaKnown RBP11.29□□□□□ -0.6
CD9-201ENST00000009180 ECM1Q16610 540 aa11.29□□□□□ -0.6
CD9-201ENST00000009180 TRIM60Q495X7 471 aa11.29□□□□□ -0.6
CD9-201ENST00000009180 ATL3Q6DD88 541 aa11.29□□□□□ -0.6
CD9-201ENST00000009180 GDF6Q6KF10 455 aaPredicted RBP11.29□□□□□ -0.6
CD9-201ENST00000009180 SLC39A5Q6ZMH5 540 aa11.29□□□□□ -0.6
CD9-201ENST00000009180 PLPPR4Q7Z2D5 763 aa11.29□□□□□ -0.6
CD9-201ENST00000009180 TPH2Q8IWU9 490 aa11.29□□□□□ -0.6
CD9-201ENST00000009180 CKAP2LQ8IYA6 745 aa11.29□□□□□ -0.6
CD9-201ENST00000009180 C7orf31Q8N865 590 aa11.29□□□□□ -0.6
CD9-201ENST00000009180 KRI1Q8N9T8 703 aaKnown RBP11.29□□□□□ -0.6
CD9-201ENST00000009180 SLC43A3Q8NBI5 491 aa11.29□□□□□ -0.6
CD9-201ENST00000009180 SYMPKQ92797 1274 aaKnown RBP11.29□□□□□ -0.6
CD9-201ENST00000009180 EPSTI1Q96J88 318 aa11.29□□□□□ -0.6
CD9-201ENST00000009180 SPATA32Q96LK8 384 aa11.29□□□□□ -0.6
CD9-201ENST00000009180 PLIN2Q99541 437 aa11.29□□□□□ -0.6
CD9-201ENST00000009180 HSD17B14Q9BPX1 270 aa11.29□□□□□ -0.6
CD9-201ENST00000009180 TRPV6Q9H1D0 765 aa11.29□□□□□ -0.6
CD9-201ENST00000009180 TRMT13Q9NUP7 481 aaKnown RBP11.29□□□□□ -0.6
CD9-201ENST00000009180 SETD4Q9NVD3 440 aa11.29□□□□□ -0.6
CD9-201ENST00000009180 SEPT9Q9UHD8 586 aaPredicted RBP11.29□□□□□ -0.6
CD9-201ENST00000009180 RCOR1Q9UKL0 485 aa11.29□□□□□ -0.6
CD9-201ENST00000009180 CFAP45Q9UL16 551 aa11.29□□□□□ -0.6
CD9-201ENST00000009180 ATP11BQ9Y2G3 1177 aa11.29□□□□□ -0.6
CD9-201ENST00000009180 SCN10AQ9Y5Y9 1956 aa11.28□□□□□ -0.6
CD9-201ENST00000009180 DDX11L8A8MPP1 907 aa11.28□□□□□ -0.6
CD9-201ENST00000009180 ZBTB42B2RXF5 422 aa11.28□□□□□ -0.6
CD9-201ENST00000009180 ARVCFO00192 962 aa11.28□□□□□ -0.6
CD9-201ENST00000009180 PQBP1O60828 265 aaKnown RBP11.28□□□□□ -0.6
CD9-201ENST00000009180 PPP6R2O75170 966 aa11.28□□□□□ -0.6
CD9-201ENST00000009180 SLC34A2O95436 690 aa11.28□□□□□ -0.6
CD9-201ENST00000009180 INSRRP14616 1297 aa11.28□□□□□ -0.6
CD9-201ENST00000009180 CAPN2P17655 700 aa11.28□□□□□ -0.6
CD9-201ENST00000009180 LONP1P36776 959 aaKnown RBP11.28□□□□□ -0.6
CD9-201ENST00000009180 RTP1P59025 263 aa11.28□□□□□ -0.6
CD9-201ENST00000009180 PPFIA1Q13136 1202 aa11.28□□□□□ -0.6
CD9-201ENST00000009180 PDIA5Q14554 519 aa11.28□□□□□ -0.6
CD9-201ENST00000009180 KARSQ15046 597 aaKnown RBP11.28□□□□□ -0.6
CD9-201ENST00000009180 GRIK4Q16099 956 aa11.28□□□□□ -0.6
CD9-201ENST00000009180 AXDND1Q5T1B0 1012 aaPredicted RBP11.28□□□□□ -0.6
CD9-201ENST00000009180 KRT79Q5XKE5 535 aa11.28□□□□□ -0.6
CD9-201ENST00000009180 KCNK18Q7Z418 384 aa11.28□□□□□ -0.6
CD9-201ENST00000009180 CABP7Q86V35 215 aa11.28□□□□□ -0.6
CD9-201ENST00000009180 CATSPER3Q86XQ3 398 aa11.28□□□□□ -0.6
CD9-201ENST00000009180 ZNF579Q8NAF0 562 aaKnown RBP11.28□□□□□ -0.6
CD9-201ENST00000009180 NEK9Q8TD19 979 aa11.28□□□□□ -0.6
CD9-201ENST00000009180 KCNG4Q8TDN1 519 aa11.28□□□□□ -0.6
CD9-201ENST00000009180 PIGOQ8TEQ8 1089 aa11.28□□□□□ -0.6
CD9-201ENST00000009180 ATP8B4Q8TF62 1192 aa11.28□□□□□ -0.6
CD9-201ENST00000009180 LMBR1Q8WVP7 490 aa11.28□□□□□ -0.6
CD9-201ENST00000009180 ATP6V0A1Q93050 837 aa11.28□□□□□ -0.6
CD9-201ENST00000009180 PNMA5Q96PV4 448 aa11.28□□□□□ -0.6
CD9-201ENST00000009180 POLR3CQ9BUI4 534 aaPredicted RBP11.28□□□□□ -0.6
CD9-201ENST00000009180 RAB34Q9BZG1 259 aa11.28□□□□□ -0.6
CD9-201ENST00000009180 ZSWIM4Q9H7M6 989 aa11.28□□□□□ -0.6
CD9-201ENST00000009180 PCDHA7Q9UN72 937 aa11.28□□□□□ -0.6
CD9-201ENST00000009180 MORC2Q9Y6X9 1032 aaPredicted RBP11.28□□□□□ -0.6
CD9-201ENST00000009180 B4GALT4O60513 344 aa11.27□□□□□ -0.61
CD9-201ENST00000009180 CUTAO60888 179 aa11.27□□□□□ -0.61
CD9-201ENST00000009180 RPA1P27694 616 aa11.27□□□□□ -0.61
CD9-201ENST00000009180 SLC26A2P50443 739 aa11.27□□□□□ -0.61
CD9-201ENST00000009180 CDK7P50613 346 aa11.27□□□□□ -0.61
CD9-201ENST00000009180 NPEPPSP55786 919 aa11.27□□□□□ -0.61
CD9-201ENST00000009180 TLE2Q04725 743 aa11.27□□□□□ -0.61
CD9-201ENST00000009180 GRB10Q13322 594 aa11.27□□□□□ -0.61
CD9-201ENST00000009180 SNX17Q15036 470 aa11.27□□□□□ -0.61
CD9-201ENST00000009180 MTERF2Q49AM1 385 aa11.27□□□□□ -0.61
CD9-201ENST00000009180 XKR3Q5GH77 459 aa11.27□□□□□ -0.61
CD9-201ENST00000009180 HAUS3Q68CZ6 603 aa11.27□□□□□ -0.61
CD9-201ENST00000009180 NFRKBQ6P4R8 1299 aa11.27□□□□□ -0.61
CD9-201ENST00000009180 SHC4Q6S5L8 630 aa11.27□□□□□ -0.61
CD9-201ENST00000009180 ANO5Q75V66 913 aa11.27□□□□□ -0.61
CD9-201ENST00000009180 ERMNQ8TAM6 284 aa11.27□□□□□ -0.61
CD9-201ENST00000009180 LRRC15Q8TF66 581 aa11.27□□□□□ -0.61
CD9-201ENST00000009180 CTAGE1Q96RT6 745 aa11.27□□□□□ -0.61
CD9-201ENST00000009180 TUFT1Q9NNX1 390 aa11.27□□□□□ -0.61
CD9-201ENST00000009180 BMP2KQ9NSY1 1161 aaPredicted RBP11.27□□□□□ -0.61
CD9-201ENST00000009180 DDX19AQ9NUU7 478 aaKnown RBP11.27□□□□□ -0.61
CD9-201ENST00000009180 GTF2IRD1Q9UHL9 959 aa11.27□□□□□ -0.61
CD9-201ENST00000009180 A0A087X0B3 334 aa11.26□□□□□ -0.61
CD9-201ENST00000009180 C17orf102A2RUQ5 167 aa11.26□□□□□ -0.61
CD9-201ENST00000009180 E9PMD0 336 aa11.26□□□□□ -0.61
CD9-201ENST00000009180 TREHO43280 583 aa11.26□□□□□ -0.61
CD9-201ENST00000009180 CYP2C9P11712 490 aa11.26□□□□□ -0.61
CD9-201ENST00000009180 HOXC8P31273 242 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 145 ms