RNA–Protein interactions for RNA: ENSMUST00000196220.4

Pdlim5-208, Transcript of PDZ and LIM domain protein 5, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Pdlim5, Length 1,725 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5-208ENSMUST00000196220 SnrpfP62307 86 aaKnown RBP14.63□□□□□ -0.07
Pdlim5-208ENSMUST00000196220 Irak1Q62406 710 aa14.63□□□□□ -0.07
Pdlim5-208ENSMUST00000196220 Sp4Q62445 782 aa14.63□□□□□ -0.07
Pdlim5-208ENSMUST00000196220 Sv2cQ69ZS6 727 aa14.63□□□□□ -0.07
Pdlim5-208ENSMUST00000196220 Garem2Q6PAJ3 880 aa14.63□□□□□ -0.07
Pdlim5-208ENSMUST00000196220 Ppp2r5aQ6PD03 486 aa14.63□□□□□ -0.07
Pdlim5-208ENSMUST00000196220 Recql4Q75NR7 1216 aaKnown RBP14.63□□□□□ -0.07
Pdlim5-208ENSMUST00000196220 Map3k11Q80XI6 850 aa14.63□□□□□ -0.07
Pdlim5-208ENSMUST00000196220 Acad11Q80XL6 779 aa14.63□□□□□ -0.07
Pdlim5-208ENSMUST00000196220 Senp7Q8BUH8 1037 aa14.63□□□□□ -0.07
Pdlim5-208ENSMUST00000196220 Kiaa0391Q8JZY4 584 aaKnown RBP14.63□□□□□ -0.07
Pdlim5-208ENSMUST00000196220 Cbwd1Q8VEH6 393 aa14.63□□□□□ -0.07
Pdlim5-208ENSMUST00000196220 Asic2Q925H0 512 aa14.63□□□□□ -0.07
Pdlim5-208ENSMUST00000196220 Arhgef7Q9ES28 862 aa14.63□□□□□ -0.07
Pdlim5-208ENSMUST00000196220 BcamQ9R069 622 aa14.63□□□□□ -0.07
Pdlim5-208ENSMUST00000196220 Angptl3Q9R182 455 aa14.63□□□□□ -0.07
Pdlim5-208ENSMUST00000196220 MyocO70624 490 aa14.62□□□□□ -0.07
Pdlim5-208ENSMUST00000196220 Tcp1P11983 556 aaKnown RBP14.62□□□□□ -0.07
Pdlim5-208ENSMUST00000196220 Mmp20P57748 482 aa14.62□□□□□ -0.07
Pdlim5-208ENSMUST00000196220 NfibP97863 570 aaKnown RBP14.62□□□□□ -0.07
Pdlim5-208ENSMUST00000196220 GmpsQ3THK7 693 aa14.62□□□□□ -0.07
Pdlim5-208ENSMUST00000196220 Ccdc84Q4VA36 332 aaKnown RBP14.62□□□□□ -0.07
Pdlim5-208ENSMUST00000196220 Tcf12Q61286 706 aa14.62□□□□□ -0.07
Pdlim5-208ENSMUST00000196220 Mapk4Q6P5G0 583 aa14.62□□□□□ -0.07
Pdlim5-208ENSMUST00000196220 E2f7Q6S7F2 904 aa14.62□□□□□ -0.07
Pdlim5-208ENSMUST00000196220 Yars2Q8BYL4 472 aaKnown RBP14.62□□□□□ -0.07
Pdlim5-208ENSMUST00000196220 Trim47Q8C0E3 641 aa14.62□□□□□ -0.07
Pdlim5-208ENSMUST00000196220 Slc4a8Q8JZR6 1089 aa14.62□□□□□ -0.07
Pdlim5-208ENSMUST00000196220 Dusp19Q8K4T5 220 aa14.62□□□□□ -0.07
Pdlim5-208ENSMUST00000196220 TxlnbQ8VBT1 685 aa14.62□□□□□ -0.07
Pdlim5-208ENSMUST00000196220 OscarQ8VBT3 265 aa14.62□□□□□ -0.07
Pdlim5-208ENSMUST00000196220 Calml4Q91WQ9 153 aa14.62□□□□□ -0.07
Pdlim5-208ENSMUST00000196220 Pgap3A2A559 320 aa14.61□□□□□ -0.07
Pdlim5-208ENSMUST00000196220 Pagr1bF6V0H0 108 aa14.61□□□□□ -0.07
Pdlim5-208ENSMUST00000196220 Flot1O08917 428 aa14.61□□□□□ -0.07
Pdlim5-208ENSMUST00000196220 Parp2O88554 559 aa14.61□□□□□ -0.07
Pdlim5-208ENSMUST00000196220 Gjb6P70689 261 aa14.61□□□□□ -0.07
Pdlim5-208ENSMUST00000196220 Cep126Q0VBV7 1103 aa14.61□□□□□ -0.07
Pdlim5-208ENSMUST00000196220 Mier3Q3UHF3 551 aa14.61□□□□□ -0.07
Pdlim5-208ENSMUST00000196220 Oog3Q3UWY1 500 aa14.61□□□□□ -0.07
Pdlim5-208ENSMUST00000196220 Krt31Q61765 416 aa14.61□□□□□ -0.07
Pdlim5-208ENSMUST00000196220 Tfe3Q64092 572 aaKnown RBP14.61□□□□□ -0.07
Pdlim5-208ENSMUST00000196220 Ctnna3Q65CL1 895 aa14.61□□□□□ -0.07
Pdlim5-208ENSMUST00000196220 Ppm1eQ80TL0 749 aa14.61□□□□□ -0.07
Pdlim5-208ENSMUST00000196220 Vps52Q8C754 723 aaKnown RBP14.61□□□□□ -0.07
Pdlim5-208ENSMUST00000196220 Phc3Q8CHP6 981 aa14.61□□□□□ -0.07
Pdlim5-208ENSMUST00000196220 Pagr1aQ99L02 253 aa14.61□□□□□ -0.07
Pdlim5-208ENSMUST00000196220 Grtp1Q9D3N8 359 aa14.61□□□□□ -0.07
Pdlim5-208ENSMUST00000196220 Rbp7Q9EPC5 134 aa14.61□□□□□ -0.07
Pdlim5-208ENSMUST00000196220 Slc15a2Q9ES07 729 aa14.61□□□□□ -0.07
Pdlim5-208ENSMUST00000196220 Slc12a7Q9WVL3 1083 aa14.61□□□□□ -0.07
Pdlim5-208ENSMUST00000196220 Nfxl1E9Q8I7 918 aaKnown RBP14.61□□□□□ -0.07
Pdlim5-208ENSMUST00000196220 Lmntd2Q0VET5 664 aa14.61□□□□□ -0.07
Pdlim5-208ENSMUST00000196220 Dpcr1Q3TNW5 500 aa14.61□□□□□ -0.07
Pdlim5-208ENSMUST00000196220 Sh3gl1Q62419 368 aa14.61□□□□□ -0.07
Pdlim5-208ENSMUST00000196220 Gpd2Q64521 727 aa14.61□□□□□ -0.07
Pdlim5-208ENSMUST00000196220 Spata21Q8BHW6 681 aa14.61□□□□□ -0.07
Pdlim5-208ENSMUST00000196220 Cd2bp2Q9CWK3 342 aaKnown RBP14.61□□□□□ -0.07
Pdlim5-208ENSMUST00000196220 Sbf2E9PXF8 1872 aa14.6□□□□□ -0.07
Pdlim5-208ENSMUST00000196220 Nmt1O70310 496 aaKnown RBP14.6□□□□□ -0.07
Pdlim5-208ENSMUST00000196220 FechP22315 420 aaKnown RBP14.6□□□□□ -0.07
Pdlim5-208ENSMUST00000196220 Irf8P23611 424 aa14.6□□□□□ -0.07
Pdlim5-208ENSMUST00000196220 Rps6P62754 249 aaKnown RBP14.6□□□□□ -0.07
Pdlim5-208ENSMUST00000196220 Pla2g6P97819 807 aa14.6□□□□□ -0.07
Pdlim5-208ENSMUST00000196220 Nhej1Q3KNJ2 295 aa14.6□□□□□ -0.07
Pdlim5-208ENSMUST00000196220 LbrQ3U9G9 626 aaKnown RBP14.6□□□□□ -0.07
Pdlim5-208ENSMUST00000196220 Sec31aQ3UPL0 1230 aaKnown RBP14.6□□□□□ -0.07
Pdlim5-208ENSMUST00000196220 Znf354cQ571J5 560 aa14.6□□□□□ -0.07
Pdlim5-208ENSMUST00000196220 Spdye4aQ5IBH6 268 aa14.6□□□□□ -0.07
Pdlim5-208ENSMUST00000196220 Ccdc157Q5SPX1 718 aa14.6□□□□□ -0.07
Pdlim5-208ENSMUST00000196220 Tom1l2Q5SRX1 507 aa14.6□□□□□ -0.07
Pdlim5-208ENSMUST00000196220 Lrig3Q6P1C6 1117 aa14.6□□□□□ -0.07
Pdlim5-208ENSMUST00000196220 Hdac10Q6P3E7 666 aa14.6□□□□□ -0.07
Pdlim5-208ENSMUST00000196220 Iws1Q8C1D8 766 aa14.6□□□□□ -0.07
Pdlim5-208ENSMUST00000196220 PdxkQ8K183 312 aa14.6□□□□□ -0.07
Pdlim5-208ENSMUST00000196220 Enox2Q8R0Z2 598 aa14.6□□□□□ -0.07
Pdlim5-208ENSMUST00000196220 Vmn1r218Q8R261 298 aa14.6□□□□□ -0.07
Pdlim5-208ENSMUST00000196220 Usp26Q99MX1 835 aa14.6□□□□□ -0.07
Pdlim5-208ENSMUST00000196220 Vta1Q9CR26 309 aa14.6□□□□□ -0.07
Pdlim5-208ENSMUST00000196220 Ergic2Q9CR89 377 aa14.6□□□□□ -0.07
Pdlim5-208ENSMUST00000196220 Q9D5Q8 446 aa14.6□□□□□ -0.07
Pdlim5-208ENSMUST00000196220 Fthl17aQ9DAX0 182 aa14.6□□□□□ -0.07
Pdlim5-208ENSMUST00000196220 Sertad2Q9JJG5 309 aa14.6□□□□□ -0.07
Pdlim5-208ENSMUST00000196220 Rgs17Q9QZB0 210 aa14.6□□□□□ -0.07
Pdlim5-208ENSMUST00000196220 JcadQ5DTX6 1320 aa14.59□□□□□ -0.07
Pdlim5-208ENSMUST00000196220 NinQ61043 2035 aa14.59□□□□□ -0.07
Pdlim5-208ENSMUST00000196220 Gm28919A0A087WP35 240 aa14.59□□□□□ -0.07
Pdlim5-208ENSMUST00000196220 Otud7bB2RUR8 840 aa14.59□□□□□ -0.07
Pdlim5-208ENSMUST00000196220 Ccdc78D3Z5T1 437 aa14.59□□□□□ -0.07
Pdlim5-208ENSMUST00000196220 Kif3cO35066 796 aa14.59□□□□□ -0.07
Pdlim5-208ENSMUST00000196220 Per1O35973 1291 aa14.59□□□□□ -0.07
Pdlim5-208ENSMUST00000196220 Dnajb6O54946 365 aa14.59□□□□□ -0.07
Pdlim5-208ENSMUST00000196220 Pik3r1P26450 724 aa14.59□□□□□ -0.07
Pdlim5-208ENSMUST00000196220 Gad1P48318 593 aa14.59□□□□□ -0.07
Pdlim5-208ENSMUST00000196220 Carmil2Q3V3V9 1296 aa14.59□□□□□ -0.07
Pdlim5-208ENSMUST00000196220 Hpcal4Q8BGZ1 191 aa14.59□□□□□ -0.07
Pdlim5-208ENSMUST00000196220 Olfr805Q8VFI4 319 aa14.59□□□□□ -0.07
Pdlim5-208ENSMUST00000196220 Pcdhb12Q91Y07 789 aa14.59□□□□□ -0.07
Pdlim5-208ENSMUST00000196220 Lrrc57Q9D1G5 239 aa14.59□□□□□ -0.07
Pdlim5-208ENSMUST00000196220 Mxra8Q9DBV4 442 aa14.59□□□□□ -0.07
Retrieved 100 of 22,080 RNA–protein pairs in 28 ms