RNA–Protein interactions for RNA: ENSMUST00000159405.2

Pcdh1-202, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 5 BASIC

Gene Pcdh1, Length 3,880 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-202ENSMUST00000159405 Rasal2E9PW37 1286 aa13.33□□□□□ -0.28
Pcdh1-202ENSMUST00000159405 Slc39a2G3X943 309 aa13.33□□□□□ -0.28
Pcdh1-202ENSMUST00000159405 Rgsl1H3BL40 1073 aa13.33□□□□□ -0.28
Pcdh1-202ENSMUST00000159405 Xrcc5P27641 732 aa13.33□□□□□ -0.28
Pcdh1-202ENSMUST00000159405 Rgs9bpQ148R9 237 aa13.33□□□□□ -0.28
Pcdh1-202ENSMUST00000159405 Mdh1bQ5F204 500 aa13.33□□□□□ -0.28
Pcdh1-202ENSMUST00000159405 Cdk17Q8K0D0 523 aa13.33□□□□□ -0.28
Pcdh1-202ENSMUST00000159405 Stn1Q8K2X3 378 aa13.33□□□□□ -0.28
Pcdh1-202ENSMUST00000159405 Pdia6Q922R8 440 aaKnown RBP13.33□□□□□ -0.28
Pcdh1-202ENSMUST00000159405 Chd4Q6PDQ2 1915 aaKnown RBP13.33□□□□□ -0.28
Pcdh1-202ENSMUST00000159405 Speer2E9Q9U2 264 aa13.33□□□□□ -0.28
Pcdh1-202ENSMUST00000159405 Gm45837F7D3W5 961 aa13.33□□□□□ -0.28
Pcdh1-202ENSMUST00000159405 Lrrc23O35125 340 aa13.33□□□□□ -0.28
Pcdh1-202ENSMUST00000159405 CatspereP0DP43 985 aa13.33□□□□□ -0.28
Pcdh1-202ENSMUST00000159405 Acot10Q32MW3 439 aa13.33□□□□□ -0.28
Pcdh1-202ENSMUST00000159405 Tmem120bQ3TA38 339 aa13.33□□□□□ -0.28
Pcdh1-202ENSMUST00000159405 Slc10a4Q3UEZ8 437 aa13.33□□□□□ -0.28
Pcdh1-202ENSMUST00000159405 Dcaf5Q80T85 946 aa13.33□□□□□ -0.28
Pcdh1-202ENSMUST00000159405 Znf18Q810A1 556 aa13.33□□□□□ -0.28
Pcdh1-202ENSMUST00000159405 Tyw3Q8BSA9 257 aa13.33□□□□□ -0.28
Pcdh1-202ENSMUST00000159405 Nlrp4aQ8BU40 982 aa13.33□□□□□ -0.28
Pcdh1-202ENSMUST00000159405 Pde2aQ922S4 916 aa13.33□□□□□ -0.28
Pcdh1-202ENSMUST00000159405 Taf11Q99JX1 211 aa13.33□□□□□ -0.28
Pcdh1-202ENSMUST00000159405 Ino80bQ99PT3 375 aaKnown RBP13.33□□□□□ -0.28
Pcdh1-202ENSMUST00000159405 Spocd1B1ASB6 936 aa13.33□□□□□ -0.28
Pcdh1-202ENSMUST00000159405 Gimap9G3X987 291 aa13.33□□□□□ -0.28
Pcdh1-202ENSMUST00000159405 Wdr70Q3TWF6 657 aa13.33□□□□□ -0.28
Pcdh1-202ENSMUST00000159405 Pnma5Q5DTT8 618 aa13.33□□□□□ -0.28
Pcdh1-202ENSMUST00000159405 Snx14Q8BHY8 964 aa13.33□□□□□ -0.28
Pcdh1-202ENSMUST00000159405 Fam102bQ8BQS4 339 aa13.33□□□□□ -0.28
Pcdh1-202ENSMUST00000159405 Snrnp27Q8K194 155 aa13.33□□□□□ -0.28
Pcdh1-202ENSMUST00000159405 Kcnk16G5E845 292 aa13.32□□□□□ -0.28
Pcdh1-202ENSMUST00000159405 Casp12O08736 419 aa13.32□□□□□ -0.28
Pcdh1-202ENSMUST00000159405 Rag1P15919 1040 aa13.32□□□□□ -0.28
Pcdh1-202ENSMUST00000159405 Bmp2P21274 394 aa13.32□□□□□ -0.28
Pcdh1-202ENSMUST00000159405 Crnkl1P63154 690 aaKnown RBP13.32□□□□□ -0.28
Pcdh1-202ENSMUST00000159405 Nlrx1Q3TL44 975 aa13.32□□□□□ -0.28
Pcdh1-202ENSMUST00000159405 Cage1Q5IR70 849 aa13.32□□□□□ -0.28
Pcdh1-202ENSMUST00000159405 Vps41Q5KU39 853 aa13.32□□□□□ -0.28
Pcdh1-202ENSMUST00000159405 RilpQ5ND29 369 aa13.32□□□□□ -0.28
Pcdh1-202ENSMUST00000159405 GartQ64737 1010 aa13.32□□□□□ -0.28
Pcdh1-202ENSMUST00000159405 Rexo4Q6PAQ4 432 aaKnown RBP13.32□□□□□ -0.28
Pcdh1-202ENSMUST00000159405 Eif4bQ8BGD9 611 aaKnown RBP13.32□□□□□ -0.28
Pcdh1-202ENSMUST00000159405 Nop9Q8BMC4 636 aaKnown RBP13.32□□□□□ -0.28
Pcdh1-202ENSMUST00000159405 Sh3rf3Q8C120 878 aa13.32□□□□□ -0.28
Pcdh1-202ENSMUST00000159405 Caskin2Q8VHK1 1201 aa13.32□□□□□ -0.28
Pcdh1-202ENSMUST00000159405 Zbtb1Q91VL9 713 aa13.32□□□□□ -0.28
Pcdh1-202ENSMUST00000159405 Calml4Q91WQ9 153 aa13.32□□□□□ -0.28
Pcdh1-202ENSMUST00000159405 Lman1Q9D0F3 517 aa13.32□□□□□ -0.28
Pcdh1-202ENSMUST00000159405 Atp6v1c1Q9Z1G3 382 aa13.32□□□□□ -0.28
Pcdh1-202ENSMUST00000159405 Ccdc78D3Z5T1 437 aa13.32□□□□□ -0.28
Pcdh1-202ENSMUST00000159405 Tp53P02340 387 aa13.32□□□□□ -0.28
Pcdh1-202ENSMUST00000159405 Cxcr2P35343 359 aa13.32□□□□□ -0.28
Pcdh1-202ENSMUST00000159405 EregQ61521 162 aa13.32□□□□□ -0.28
Pcdh1-202ENSMUST00000159405 Znf280dQ68FE8 974 aa13.32□□□□□ -0.28
Pcdh1-202ENSMUST00000159405 AdalQ80SY6 360 aa13.32□□□□□ -0.28
Pcdh1-202ENSMUST00000159405 Ddx10Q80Y44 875 aaKnown RBP13.32□□□□□ -0.28
Pcdh1-202ENSMUST00000159405 Tmco6Q8BQX5 494 aa13.32□□□□□ -0.28
Pcdh1-202ENSMUST00000159405 Slc26a7Q8R2Z3 656 aa13.32□□□□□ -0.28
Pcdh1-202ENSMUST00000159405 Trim10Q9WUH5 489 aa13.32□□□□□ -0.28
Pcdh1-202ENSMUST00000159405 Myh13B1AR69 1938 aa13.32□□□□□ -0.28
Pcdh1-202ENSMUST00000159405 GakQ99KY4 1305 aa13.32□□□□□ -0.28
Pcdh1-202ENSMUST00000159405 Herc3A6H6S0 1050 aa13.32□□□□□ -0.28
Pcdh1-202ENSMUST00000159405 Pfkfb3A7UAK5 555 aa13.32□□□□□ -0.28
Pcdh1-202ENSMUST00000159405 Atp9aO70228 1047 aa13.32□□□□□ -0.28
Pcdh1-202ENSMUST00000159405 Casp14O89094 257 aa13.32□□□□□ -0.28
Pcdh1-202ENSMUST00000159405 Msh2P43247 935 aaKnown RBP13.32□□□□□ -0.28
Pcdh1-202ENSMUST00000159405 Nat1P50294 290 aa13.32□□□□□ -0.28
Pcdh1-202ENSMUST00000159405 Rrp36Q3UFY0 244 aaKnown RBP13.32□□□□□ -0.28
Pcdh1-202ENSMUST00000159405 Sec23ipQ6NZC7 998 aa13.32□□□□□ -0.28
Pcdh1-202ENSMUST00000159405 Trip10Q8CJ53 603 aa13.32□□□□□ -0.28
Pcdh1-202ENSMUST00000159405 PlekQ9JHK5 350 aaKnown RBP13.32□□□□□ -0.28
Pcdh1-202ENSMUST00000159405 Abca14E9Q8F8 1683 aa13.31□□□□□ -0.28
Pcdh1-202ENSMUST00000159405 Stox1B2RQL2 990 aa13.31□□□□□ -0.28
Pcdh1-202ENSMUST00000159405 Gm1141B9EJU1 475 aa13.31□□□□□ -0.28
Pcdh1-202ENSMUST00000159405 Pdia2D3Z6P0 527 aa13.31□□□□□ -0.28
Pcdh1-202ENSMUST00000159405 Zfp212G3X8R7 492 aa13.31□□□□□ -0.28
Pcdh1-202ENSMUST00000159405 Fen1P39749 378 aa13.31□□□□□ -0.28
Pcdh1-202ENSMUST00000159405 Traf3ip1Q149C2 625 aa13.31□□□□□ -0.28
Pcdh1-202ENSMUST00000159405 Dok7Q18PE0 504 aa13.31□□□□□ -0.28
Pcdh1-202ENSMUST00000159405 MlxipQ2VPU4 917 aa13.31□□□□□ -0.28
Pcdh1-202ENSMUST00000159405 Zfp957Q3UT76 567 aa13.31□□□□□ -0.28
Pcdh1-202ENSMUST00000159405 Vps52Q8C754 723 aaKnown RBP13.31□□□□□ -0.28
Pcdh1-202ENSMUST00000159405 Ophn1Q99J31 802 aa13.31□□□□□ -0.28
Pcdh1-202ENSMUST00000159405 Igsf9bE9PZ19 1328 aa13.31□□□□□ -0.28
Pcdh1-202ENSMUST00000159405 Tbc1d16A2ABG4 766 aa13.31□□□□□ -0.28
Pcdh1-202ENSMUST00000159405 Lig1P37913 916 aa13.31□□□□□ -0.28
Pcdh1-202ENSMUST00000159405 Slc38a10Q5I012 1090 aa13.31□□□□□ -0.28
Pcdh1-202ENSMUST00000159405 Fam71bQ5STT6 665 aa13.31□□□□□ -0.28
Pcdh1-202ENSMUST00000159405 Nudt13Q8JZU0 352 aa13.31□□□□□ -0.28
Pcdh1-202ENSMUST00000159405 Hs2st1Q8R3H7 356 aa13.31□□□□□ -0.28
Pcdh1-202ENSMUST00000159405 Pard6bQ9JK83 371 aa13.31□□□□□ -0.28
Pcdh1-202ENSMUST00000159405 Edf1Q9JMG1 148 aaKnown RBP13.31□□□□□ -0.28
Pcdh1-202ENSMUST00000159405 Irs4Q9Z0Y7 1216 aa13.31□□□□□ -0.28
Pcdh1-202ENSMUST00000159405 Eif6O55135 245 aa13.31□□□□□ -0.28
Pcdh1-202ENSMUST00000159405 Iqsec3Q3TES0 1195 aa13.31□□□□□ -0.28
Pcdh1-202ENSMUST00000159405 Chn1Q91V57 459 aa13.31□□□□□ -0.28
Pcdh1-202ENSMUST00000159405 Lrrc59Q922Q8 307 aaKnown RBP13.31□□□□□ -0.28
Pcdh1-202ENSMUST00000159405 Slc8a3S4R2P9 928 aa13.31□□□□□ -0.28
Pcdh1-202ENSMUST00000159405 Col15a1O35206 1367 aa13.31□□□□□ -0.28
Retrieved 100 of 22,080 RNA–protein pairs in 18.7 ms