RNA–Protein interactions for RNA: ENSMUST00000108593.7

Ctdnep1-201, Transcript of CTD nuclear envelope phosphatase 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctdnep1, Length 1,627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdnep1-201ENSMUST00000108593 Nlrc5C3VPR6 1915 aa33.89■■■■□ 3.02
Ctdnep1-201ENSMUST00000108593 Gas2l3Q3UWW6 683 aa33.89■■■■□ 3.02
Ctdnep1-201ENSMUST00000108593 Ppp1r13bQ62415 1087 aa33.89■■■■□ 3.02
Ctdnep1-201ENSMUST00000108593 Grik4Q8BMF5 956 aa33.89■■■■□ 3.02
Ctdnep1-201ENSMUST00000108593 Hnrnpul1Q8VDM6 859 aaKnown RBP33.89■■■■□ 3.02
Ctdnep1-201ENSMUST00000108593 Olfr1494Q8VGP8 315 aa33.89■■■■□ 3.02
Ctdnep1-201ENSMUST00000108593 Cfap58B2RW38 873 aa33.88■■■■□ 3.01
Ctdnep1-201ENSMUST00000108593 Kmt5aQ2YDW7 349 aa33.88■■■■□ 3.01
Ctdnep1-201ENSMUST00000108593 Atp6v0d2Q80SY3 350 aa33.88■■■■□ 3.01
Ctdnep1-201ENSMUST00000108593 Clic6Q8BHB9 596 aa33.88■■■■□ 3.01
Ctdnep1-201ENSMUST00000108593 Defb19Q8K3I8 83 aa33.88■■■■□ 3.01
Ctdnep1-201ENSMUST00000108593 Phtf1Q9QZ09 761 aa33.88■■■■□ 3.01
Ctdnep1-201ENSMUST00000108593 Hoxc8P09025 242 aa33.87■■■■□ 3.01
Ctdnep1-201ENSMUST00000108593 SsbP32067 415 aaKnown RBP33.87■■■■□ 3.01
Ctdnep1-201ENSMUST00000108593 Mcm6P97311 821 aa33.87■■■■□ 3.01
Ctdnep1-201ENSMUST00000108593 Casp7P97864 303 aa33.87■■■■□ 3.01
Ctdnep1-201ENSMUST00000108593 Znf865Q3U3I9 1058 aa33.87■■■■□ 3.01
Ctdnep1-201ENSMUST00000108593 Q8C5S3 137 aa33.87■■■■□ 3.01
Ctdnep1-201ENSMUST00000108593 Kremen1Q99N43 473 aa33.87■■■■□ 3.01
Ctdnep1-201ENSMUST00000108593 Fmnl1Q9JL26 1094 aa33.87■■■■□ 3.01
Ctdnep1-201ENSMUST00000108593 Acad12D3Z7X0 555 aa33.86■■■■□ 3.01
Ctdnep1-201ENSMUST00000108593 Cntnap3E9PY62 1287 aa33.86■■■■□ 3.01
Ctdnep1-201ENSMUST00000108593 Slc16a2O70324 545 aa33.86■■■■□ 3.01
Ctdnep1-201ENSMUST00000108593 Ptpn11P35235 597 aa33.86■■■■□ 3.01
Ctdnep1-201ENSMUST00000108593 Ccr1P51675 355 aa33.86■■■■□ 3.01
Ctdnep1-201ENSMUST00000108593 Tarbp2P97473 365 aa33.86■■■■□ 3.01
Ctdnep1-201ENSMUST00000108593 Btnl9Q8BJE2 536 aa33.86■■■■□ 3.01
Ctdnep1-201ENSMUST00000108593 LctF8VPT3 1931 aa33.86■■■■□ 3.01
Ctdnep1-201ENSMUST00000108593 Trim12cD3Z3L3 497 aa33.86■■■■□ 3.01
Ctdnep1-201ENSMUST00000108593 Gemin4Q6P6L6 1058 aaKnown RBP33.86■■■■□ 3.01
Ctdnep1-201ENSMUST00000108593 Tcaf3Q6QR59 914 aa33.86■■■■□ 3.01
Ctdnep1-201ENSMUST00000108593 Dmtf1Q8CE22 761 aa33.86■■■■□ 3.01
Ctdnep1-201ENSMUST00000108593 Ank3G5E8K5 1961 aa33.86■■■■□ 3.01
Ctdnep1-201ENSMUST00000108593 Etv6P97360 485 aa33.85■■■■□ 3.01
Ctdnep1-201ENSMUST00000108593 Adgrg2Q8CJ12 1009 aa33.85■■■■□ 3.01
Ctdnep1-201ENSMUST00000108593 Apol7aB2RT54 418 aa33.84■■■■□ 3.01
Ctdnep1-201ENSMUST00000108593 Zscan29E9Q5B4 869 aa33.84■■■■□ 3.01
Ctdnep1-201ENSMUST00000108593 Scarf1Q5ND28 820 aa33.84■■■■□ 3.01
Ctdnep1-201ENSMUST00000108593 Exoc3Q6KAR6 755 aa33.84■■■■□ 3.01
Ctdnep1-201ENSMUST00000108593 Olfr397Q8VEZ6 315 aa33.84■■■■□ 3.01
Ctdnep1-201ENSMUST00000108593 Fbxo16Q9QZM9 334 aa33.84■■■■□ 3.01
Ctdnep1-201ENSMUST00000108593 Arid3bQ9Z1N7 568 aa33.84■■■■□ 3.01
Ctdnep1-201ENSMUST00000108593 Ttll6A4Q9E8 822 aa33.83■■■■□ 3.01
Ctdnep1-201ENSMUST00000108593 Col9a2Q07643 688 aa33.83■■■■□ 3.01
Ctdnep1-201ENSMUST00000108593 Ssh1Q76I79 1042 aa33.83■■■■□ 3.01
Ctdnep1-201ENSMUST00000108593 Camsap3Q80VC9 1252 aa33.83■■■■□ 3.01
Ctdnep1-201ENSMUST00000108593 Zmynd15Q8C0R7 736 aa33.83■■■■□ 3.01
Ctdnep1-201ENSMUST00000108593 Tmod3Q9JHJ0 352 aa33.83■■■■□ 3.01
Ctdnep1-201ENSMUST00000108593 Atp8b5A3FIN4 1183 aa33.82■■■■□ 3.01
Ctdnep1-201ENSMUST00000108593 MtrA6H5Y3 1253 aa33.82■■■■□ 3.01
Ctdnep1-201ENSMUST00000108593 Rsph10bE9PYQ0 876 aa33.82■■■■□ 3.01
Ctdnep1-201ENSMUST00000108593 Idh1O88844 414 aaKnown RBP33.82■■■■□ 3.01
Ctdnep1-201ENSMUST00000108593 MafP54843 370 aa33.82■■■■□ 3.01
Ctdnep1-201ENSMUST00000108593 Palb2Q3U0P1 1104 aa33.82■■■■□ 3.01
Ctdnep1-201ENSMUST00000108593 Prr11Q8BHE0 368 aa33.82■■■■□ 3.01
Ctdnep1-201ENSMUST00000108593 Stoml1Q8CI66 399 aa33.82■■■■□ 3.01
Ctdnep1-201ENSMUST00000108593 Med4Q9CQA5 270 aa33.82■■■■□ 3.01
Ctdnep1-201ENSMUST00000108593 Ppp1r3gQ9CW07 347 aa33.82■■■■□ 3.01
Ctdnep1-201ENSMUST00000108593 Kntc1Q8C3Y4 2207 aa33.82■■■■□ 3.01
Ctdnep1-201ENSMUST00000108593 Esyt3Q5DTI8 891 aa33.82■■■■□ 3
Ctdnep1-201ENSMUST00000108593 Sun3Q5SS91 320 aa33.82■■■■□ 3
Ctdnep1-201ENSMUST00000108593 Mcm7Q61881 719 aaKnown RBP33.82■■■■□ 3
Ctdnep1-201ENSMUST00000108593 Pi4kbQ8BKC8 816 aa33.82■■■■□ 3
Ctdnep1-201ENSMUST00000108593 Tspan8Q8R3G9 235 aa33.82■■■■□ 3
Ctdnep1-201ENSMUST00000108593 Galk1Q9R0N0 392 aa33.82■■■■□ 3
Ctdnep1-201ENSMUST00000108593 GsdmeQ9Z2D3 512 aa33.82■■■■□ 3
Ctdnep1-201ENSMUST00000108593 Atp2b1G5E829 1220 aa33.81■■■■□ 3
Ctdnep1-201ENSMUST00000108593 Hoxb13P70321 286 aa33.81■■■■□ 3
Ctdnep1-201ENSMUST00000108593 Rrp12Q6P5B0 1295 aaKnown RBP33.81■■■■□ 3
Ctdnep1-201ENSMUST00000108593 Fermt2Q8CIB5 680 aa33.81■■■■□ 3
Ctdnep1-201ENSMUST00000108593 Fubp1Q91WJ8 651 aaKnown RBP33.81■■■■□ 3
Ctdnep1-201ENSMUST00000108593 Mx2Q9WVP9 655 aa33.81■■■■□ 3
Ctdnep1-201ENSMUST00000108593 Nfe2Q07279 373 aa33.8■■■■□ 3
Ctdnep1-201ENSMUST00000108593 E2f8Q58FA4 860 aa33.8■■■■□ 3
Ctdnep1-201ENSMUST00000108593 DekQ7TNV0 380 aaKnown RBP33.8■■■■□ 3
Ctdnep1-201ENSMUST00000108593 Cep120Q7TSG1 988 aa33.8■■■■□ 3
Ctdnep1-201ENSMUST00000108593 Asnsd1Q8BFS9 627 aa33.8■■■■□ 3
Ctdnep1-201ENSMUST00000108593 HttP42859 3119 aa33.8■■■■□ 3
Ctdnep1-201ENSMUST00000108593 Ccdc122Q8BVN0 290 aa33.79■■■■□ 3
Ctdnep1-201ENSMUST00000108593 Adnp2Q8CHC8 1165 aaKnown RBP33.79■■■■□ 3
Ctdnep1-201ENSMUST00000108593 Pkd2l2Q9JLG4 621 aa33.79■■■■□ 3
Ctdnep1-201ENSMUST00000108593 Tnfsf13bQ9WU72 309 aa33.79■■■■□ 3
Ctdnep1-201ENSMUST00000108593 Tpm3-rs7D3Z2H9 248 aa33.79■■■■□ 3
Ctdnep1-201ENSMUST00000108593 Got1P05201 413 aa33.79■■■■□ 3
Ctdnep1-201ENSMUST00000108593 F13a1Q8BH61 732 aa33.79■■■■□ 3
Ctdnep1-201ENSMUST00000108593 Cnksr3Q8BMA3 555 aa33.79■■■■□ 3
Ctdnep1-201ENSMUST00000108593 VcpkmtQ8C436 228 aa33.79■■■■□ 3
Ctdnep1-201ENSMUST00000108593 Emc2Q9CRD2 297 aa33.79■■■■□ 3
Ctdnep1-201ENSMUST00000108593 Six6os1Q9CTN5 574 aa33.79■■■■□ 3
Ctdnep1-201ENSMUST00000108593 Tmem206Q9D771 350 aa33.79■■■■□ 3
Ctdnep1-201ENSMUST00000108593 Col5a3Q9JLI2 1739 aa33.78■■■■□ 3
Ctdnep1-201ENSMUST00000108593 Svs3aF2Z472 265 aa33.78■■■■□ 3
Ctdnep1-201ENSMUST00000108593 Spink5Q148R4 1017 aa33.78■■■■□ 3
Ctdnep1-201ENSMUST00000108593 Mief2Q5NCS9 454 aa33.78■■■■□ 3
Ctdnep1-201ENSMUST00000108593 Rtfdc1Q99K95 307 aa33.78■■■■□ 3
Ctdnep1-201ENSMUST00000108593 Glipr1l2Q9CQ35 332 aa33.78■■■■□ 3
Ctdnep1-201ENSMUST00000108593 Scnn1bQ9WU38 638 aa33.78■■■■□ 3
Ctdnep1-201ENSMUST00000108593 Ankrd16A2AS55 361 aa33.77■■■■□ 3
Ctdnep1-201ENSMUST00000108593 Skor2A7M7C7 1008 aa33.77■■■■□ 3
Ctdnep1-201ENSMUST00000108593 Trappc11B2RXC1 1133 aa33.77■■■■□ 3
Retrieved 100 of 22,080 RNA–protein pairs in 17.2 ms