RNA–Protein interactions for RNA: ENSMUST00000088349.2

Col9a1-202, Transcript of Collagen alpha-1(IX) chain, mousemouse

TSL 1 (best) BASIC

Gene Col9a1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1-202ENSMUST00000088349 Tex35Q14BK3 207 aa12.63□□□□□ -0.39
Col9a1-202ENSMUST00000088349 BC051142Q3V0M8 400 aa12.63□□□□□ -0.39
Col9a1-202ENSMUST00000088349 Npdc1Q64322 332 aa12.63□□□□□ -0.39
Col9a1-202ENSMUST00000088349 PicalmQ7M6Y3 660 aaKnown RBP12.63□□□□□ -0.39
Col9a1-202ENSMUST00000088349 R3hdm2Q80TM6 1044 aaKnown RBP12.63□□□□□ -0.39
Col9a1-202ENSMUST00000088349 CgasQ8C6L5 507 aa12.63□□□□□ -0.39
Col9a1-202ENSMUST00000088349 Chn1Q91V57 459 aa12.63□□□□□ -0.39
Col9a1-202ENSMUST00000088349 Mzb1Q9D8I1 188 aa12.63□□□□□ -0.39
Col9a1-202ENSMUST00000088349 Cacna1sQ02789 1880 aa12.63□□□□□ -0.39
Col9a1-202ENSMUST00000088349 4930523C07RikE9Q2T4 99 aa12.63□□□□□ -0.39
Col9a1-202ENSMUST00000088349 Atp8a1P70704 1164 aa12.63□□□□□ -0.39
Col9a1-202ENSMUST00000088349 Klhdc9Q3USL1 350 aa12.63□□□□□ -0.39
Col9a1-202ENSMUST00000088349 Pim2Q62070 370 aa12.63□□□□□ -0.39
Col9a1-202ENSMUST00000088349 Tspyl5Q69ZB3 406 aa12.63□□□□□ -0.39
Col9a1-202ENSMUST00000088349 Enox2Q8R0Z2 598 aa12.63□□□□□ -0.39
Col9a1-202ENSMUST00000088349 Dr1Q91WV0 176 aa12.63□□□□□ -0.39
Col9a1-202ENSMUST00000088349 Cul5Q9D5V5 780 aa12.63□□□□□ -0.39
Col9a1-202ENSMUST00000088349 Sertad2Q9JJG5 309 aa12.63□□□□□ -0.39
Col9a1-202ENSMUST00000088349 Gfpt2Q9Z2Z9 682 aa12.63□□□□□ -0.39
Col9a1-202ENSMUST00000088349 Ltbp1Q8CG19 1712 aa12.62□□□□□ -0.39
Col9a1-202ENSMUST00000088349 Fbf1A2A870 1173 aa12.62□□□□□ -0.39
Col9a1-202ENSMUST00000088349 Wdr72D3YYM4 1114 aa12.62□□□□□ -0.39
Col9a1-202ENSMUST00000088349 CraddO88843 199 aa12.62□□□□□ -0.39
Col9a1-202ENSMUST00000088349 Mucl2P02815 138 aa12.62□□□□□ -0.39
Col9a1-202ENSMUST00000088349 Atp6v0a2P15920 856 aa12.62□□□□□ -0.39
Col9a1-202ENSMUST00000088349 Mcl1P97287 331 aa12.62□□□□□ -0.39
Col9a1-202ENSMUST00000088349 Cyfip2Q5SQX6 1253 aa12.62□□□□□ -0.39
Col9a1-202ENSMUST00000088349 Rhbdf1Q6PIX5 856 aa12.62□□□□□ -0.39
Col9a1-202ENSMUST00000088349 Ift74Q8BKE9 600 aa12.62□□□□□ -0.39
Col9a1-202ENSMUST00000088349 Tbx22Q8K402 517 aa12.62□□□□□ -0.39
Col9a1-202ENSMUST00000088349 Rfc4Q99J62 364 aa12.62□□□□□ -0.39
Col9a1-202ENSMUST00000088349 Pramef12Q9D2F1 463 aa12.62□□□□□ -0.39
Col9a1-202ENSMUST00000088349 Myl7Q9QVP4 175 aa12.62□□□□□ -0.39
Col9a1-202ENSMUST00000088349 EmcnQ9R0H2 261 aa12.62□□□□□ -0.39
Col9a1-202ENSMUST00000088349 1700017N19RikA0A087WPJ1 469 aa12.62□□□□□ -0.39
Col9a1-202ENSMUST00000088349 Map7d1A2AJI0 846 aa12.62□□□□□ -0.39
Col9a1-202ENSMUST00000088349 Gm382B1AXN3 1250 aa12.62□□□□□ -0.39
Col9a1-202ENSMUST00000088349 MagohP61327 146 aaKnown RBP12.62□□□□□ -0.39
Col9a1-202ENSMUST00000088349 Rbm46P86049 533 aa12.62□□□□□ -0.39
Col9a1-202ENSMUST00000088349 Ppp4cP97470 307 aa12.62□□□□□ -0.39
Col9a1-202ENSMUST00000088349 Lilrb4Q64281 335 aa12.62□□□□□ -0.39
Col9a1-202ENSMUST00000088349 Lca5Q80ST9 704 aa12.62□□□□□ -0.39
Col9a1-202ENSMUST00000088349 Ep400Q8CHI8 3072 aaKnown RBP12.62□□□□□ -0.39
Col9a1-202ENSMUST00000088349 Senp2Q91ZX6 588 aa12.62□□□□□ -0.39
Col9a1-202ENSMUST00000088349 MagohbQ9CQL1 146 aa12.62□□□□□ -0.39
Col9a1-202ENSMUST00000088349 Capn12Q9ER56 720 aa12.62□□□□□ -0.39
Col9a1-202ENSMUST00000088349 Gm5114W4VSN8 858 aa12.62□□□□□ -0.39
Col9a1-202ENSMUST00000088349 Aknad1E9Q8N6 675 aa12.61□□□□□ -0.39
Col9a1-202ENSMUST00000088349 Apol10bG3X9K7 334 aa12.61□□□□□ -0.39
Col9a1-202ENSMUST00000088349 Eftud2O08810 971 aaKnown RBP12.61□□□□□ -0.39
Col9a1-202ENSMUST00000088349 Pkn1P70268 946 aa12.61□□□□□ -0.39
Col9a1-202ENSMUST00000088349 Kiaa1211Q5PR69 1207 aa12.61□□□□□ -0.39
Col9a1-202ENSMUST00000088349 Trmt2aQ8BNV1 574 aaKnown RBP12.61□□□□□ -0.39
Col9a1-202ENSMUST00000088349 Fam228aQ8CDW1 299 aa12.61□□□□□ -0.39
Col9a1-202ENSMUST00000088349 Calcoco1Q8CGU1 691 aa12.61□□□□□ -0.39
Col9a1-202ENSMUST00000088349 AagabQ8R2R3 316 aa12.61□□□□□ -0.39
Col9a1-202ENSMUST00000088349 Q922C1 641 aa12.61□□□□□ -0.39
Col9a1-202ENSMUST00000088349 Psma8Q9CWH6 250 aa12.61□□□□□ -0.39
Col9a1-202ENSMUST00000088349 Ssr1Q9CY50 286 aaKnown RBP12.61□□□□□ -0.39
Col9a1-202ENSMUST00000088349 Usp4P35123 962 aa12.61□□□□□ -0.39
Col9a1-202ENSMUST00000088349 Ercc5P35689 1170 aa12.61□□□□□ -0.39
Col9a1-202ENSMUST00000088349 Hspa9P38647 679 aaKnown RBP12.61□□□□□ -0.39
Col9a1-202ENSMUST00000088349 Tatdn3Q3U1C6 294 aa12.61□□□□□ -0.39
Col9a1-202ENSMUST00000088349 Prr7Q3V0I2 269 aa12.61□□□□□ -0.39
Col9a1-202ENSMUST00000088349 MaeaQ4VC33 396 aa12.61□□□□□ -0.39
Col9a1-202ENSMUST00000088349 Nr2e1Q64104 385 aa12.61□□□□□ -0.39
Col9a1-202ENSMUST00000088349 Lrrcc1Q69ZB0 1026 aa12.61□□□□□ -0.39
Col9a1-202ENSMUST00000088349 Ttc7aQ8BGB2 858 aa12.61□□□□□ -0.39
Col9a1-202ENSMUST00000088349 Chtf18Q8BIW9 969 aa12.61□□□□□ -0.39
Col9a1-202ENSMUST00000088349 CbsQ91WT9 561 aa12.61□□□□□ -0.39
Col9a1-202ENSMUST00000088349 Themis2Q91YX0 663 aa12.61□□□□□ -0.39
Col9a1-202ENSMUST00000088349 MlxiplQ99MZ3 864 aa12.61□□□□□ -0.39
Col9a1-202ENSMUST00000088349 4930449I24RikQ9D5E3 319 aa12.61□□□□□ -0.39
Col9a1-202ENSMUST00000088349 Eid1Q9DCR4 169 aa12.61□□□□□ -0.39
Col9a1-202ENSMUST00000088349 Cdc42ep4Q9JM96 349 aaKnown RBP12.61□□□□□ -0.39
Col9a1-202ENSMUST00000088349 Osbpl9A2A8Z1 736 aa12.6□□□□□ -0.39
Col9a1-202ENSMUST00000088349 Cacna2d1O08532 1103 aa12.6□□□□□ -0.39
Col9a1-202ENSMUST00000088349 Sept2P42208 361 aaKnown RBP12.6□□□□□ -0.39
Col9a1-202ENSMUST00000088349 Zc3h18Q0P678 948 aaKnown RBP12.6□□□□□ -0.39
Col9a1-202ENSMUST00000088349 Fgd5Q80UZ0 1219 aa12.6□□□□□ -0.39
Col9a1-202ENSMUST00000088349 Pank4Q80YV4 820 aa12.6□□□□□ -0.39
Col9a1-202ENSMUST00000088349 E330017A01RikQ8BU47 192 aa12.6□□□□□ -0.39
Col9a1-202ENSMUST00000088349 Calhm4Q8CE93 315 aa12.6□□□□□ -0.39
Col9a1-202ENSMUST00000088349 Zfp984A2A7A2 547 aa12.6□□□□□ -0.39
Col9a1-202ENSMUST00000088349 AurkbO70126 345 aa12.6□□□□□ -0.39
Col9a1-202ENSMUST00000088349 Klra9Q2TJJ8 266 aa12.6□□□□□ -0.39
Col9a1-202ENSMUST00000088349 E2f5Q61502 335 aa12.6□□□□□ -0.39
Col9a1-202ENSMUST00000088349 Jade3Q6IE82 823 aa12.6□□□□□ -0.39
Col9a1-202ENSMUST00000088349 P3h4Q8K2B0 443 aa12.6□□□□□ -0.39
Col9a1-202ENSMUST00000088349 Stk11Q9WTK7 436 aa12.6□□□□□ -0.39
Col9a1-202ENSMUST00000088349 Nr1i3O35627 358 aa12.6□□□□□ -0.39
Col9a1-202ENSMUST00000088349 Parp2O88554 559 aa12.6□□□□□ -0.39
Col9a1-202ENSMUST00000088349 H2afzP0C0S6 128 aa12.6□□□□□ -0.39
Col9a1-202ENSMUST00000088349 Irx1P81068 480 aa12.6□□□□□ -0.39
Col9a1-202ENSMUST00000088349 Gas1Q01721 343 aa12.6□□□□□ -0.39
Col9a1-202ENSMUST00000088349 H2afvQ3THW5 128 aa12.6□□□□□ -0.39
Col9a1-202ENSMUST00000088349 Rasip1Q3U0S6 961 aa12.6□□□□□ -0.39
Col9a1-202ENSMUST00000088349 Tmx4Q8C0L0 335 aa12.6□□□□□ -0.39
Col9a1-202ENSMUST00000088349 Il17cQ8K4C5 194 aa12.6□□□□□ -0.39
Col9a1-202ENSMUST00000088349 Bud13Q8R149 637 aa12.6□□□□□ -0.39
Retrieved 100 of 22,080 RNA–protein pairs in 13.7 ms