RNA–Protein interactions for RNA: ENSMUST00000055758.15

Ubr3-201, Transcript of E3 ubiquitin-protein ligase UBR3, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ubr3, Length 8,072 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr3-201ENSMUST00000055758 MrrfQ9D6S7 262 aaKnown RBP16.77■□□□□ 0.27
Ubr3-201ENSMUST00000055758 Ing2Q9ESK4 281 aa16.77■□□□□ 0.27
Ubr3-201ENSMUST00000055758 Tmem191cQ9JJB1 302 aa16.77■□□□□ 0.27
Ubr3-201ENSMUST00000055758 RecqlQ9Z129 648 aa16.77■□□□□ 0.27
Ubr3-201ENSMUST00000055758 Mlh3A0A1Y7VMP7 1443 aa16.77■□□□□ 0.27
Ubr3-201ENSMUST00000055758 Gm9992B2RWK3 458 aa16.77■□□□□ 0.27
Ubr3-201ENSMUST00000055758 Cct7P80313 544 aa16.77■□□□□ 0.27
Ubr3-201ENSMUST00000055758 Unc93aQ710D3 458 aa16.77■□□□□ 0.27
Ubr3-201ENSMUST00000055758 Col20a1Q923P0 1320 aa16.76■□□□□ 0.27
Ubr3-201ENSMUST00000055758 Numa1E9Q7G0 2094 aaKnown RBP16.76■□□□□ 0.27
Ubr3-201ENSMUST00000055758 Ifit3bE9PV48 403 aa16.76■□□□□ 0.27
Ubr3-201ENSMUST00000055758 Per2O54943 1257 aa16.76■□□□□ 0.27
Ubr3-201ENSMUST00000055758 Tmod1P49813 359 aa16.76■□□□□ 0.27
Ubr3-201ENSMUST00000055758 Atad2Q8CDM1 1040 aa16.76■□□□□ 0.27
Ubr3-201ENSMUST00000055758 Ino80bQ99PT3 375 aaKnown RBP16.76■□□□□ 0.27
Ubr3-201ENSMUST00000055758 NkapQ9D0F4 415 aaKnown RBP16.76■□□□□ 0.27
Ubr3-201ENSMUST00000055758 Ube4aE9Q735 1028 aa16.76■□□□□ 0.27
Ubr3-201ENSMUST00000055758 Ccdc69Q3TCJ8 202 aa16.76■□□□□ 0.27
Ubr3-201ENSMUST00000055758 Ehd2Q8BH64 543 aa16.76■□□□□ 0.27
Ubr3-201ENSMUST00000055758 CinpQ9D0V8 212 aa16.76■□□□□ 0.27
Ubr3-201ENSMUST00000055758 CoasyQ9DBL7 563 aa16.76■□□□□ 0.27
Ubr3-201ENSMUST00000055758 Fads3Q9JJE7 449 aa16.76■□□□□ 0.27
Ubr3-201ENSMUST00000055758 Ascc3E9PZJ8 2198 aaKnown RBP16.76■□□□□ 0.27
Ubr3-201ENSMUST00000055758 Olfr310B2RVZ1 332 aa16.76■□□□□ 0.27
Ubr3-201ENSMUST00000055758 S100a6P14069 89 aa16.76■□□□□ 0.27
Ubr3-201ENSMUST00000055758 VcpQ01853 806 aaKnown RBP16.76■□□□□ 0.27
Ubr3-201ENSMUST00000055758 Sval3Q76I99 144 aa16.76■□□□□ 0.27
Ubr3-201ENSMUST00000055758 Pex5lQ8C437 567 aa16.76■□□□□ 0.27
Ubr3-201ENSMUST00000055758 CrebzfQ91ZR3 358 aa16.76■□□□□ 0.27
Ubr3-201ENSMUST00000055758 Q9DAQ4 598 aa16.76■□□□□ 0.27
Ubr3-201ENSMUST00000055758 Gtf2ird1Q9JI57 1104 aaKnown RBP16.76■□□□□ 0.27
Ubr3-201ENSMUST00000055758 Irx2P81066 474 aa16.76■□□□□ 0.27
Ubr3-201ENSMUST00000055758 Mapk6Q61532 720 aa16.76■□□□□ 0.27
Ubr3-201ENSMUST00000055758 Pacsin1Q61644 441 aa16.76■□□□□ 0.27
Ubr3-201ENSMUST00000055758 Fbxl5Q8C2S5 690 aa16.76■□□□□ 0.27
Ubr3-201ENSMUST00000055758 AqrQ8CFQ3 1481 aaKnown RBP16.76■□□□□ 0.27
Ubr3-201ENSMUST00000055758 Kdm5bQ80Y84 1544 aa16.76■□□□□ 0.27
Ubr3-201ENSMUST00000055758 Tlr7P58681 1050 aa16.76■□□□□ 0.27
Ubr3-201ENSMUST00000055758 Arl4aP61213 200 aa16.76■□□□□ 0.27
Ubr3-201ENSMUST00000055758 Dars2Q8BIP0 653 aa16.76■□□□□ 0.27
Ubr3-201ENSMUST00000055758 Q8VDP2 222 aa16.76■□□□□ 0.27
Ubr3-201ENSMUST00000055758 Setd6Q9CWY3 473 aa16.76■□□□□ 0.27
Ubr3-201ENSMUST00000055758 Dctpp1Q9QY93 170 aa16.76■□□□□ 0.27
Ubr3-201ENSMUST00000055758 Dctn3Q9Z0Y1 186 aa16.76■□□□□ 0.27
Ubr3-201ENSMUST00000055758 Top3aO70157 1003 aa16.76■□□□□ 0.27
Ubr3-201ENSMUST00000055758 Dmc1Q61880 340 aa16.76■□□□□ 0.27
Ubr3-201ENSMUST00000055758 Oxsr1Q6P9R2 527 aa16.76■□□□□ 0.27
Ubr3-201ENSMUST00000055758 BcrQ6PAJ1 1270 aa16.76■□□□□ 0.27
Ubr3-201ENSMUST00000055758 Atp2b4Q6Q477 1205 aa16.76■□□□□ 0.27
Ubr3-201ENSMUST00000055758 Ddx19bQ8BZY3 494 aa16.76■□□□□ 0.27
Ubr3-201ENSMUST00000055758 Gtf2a1lQ8R4I4 468 aa16.76■□□□□ 0.27
Ubr3-201ENSMUST00000055758 Nrbp2Q91V36 499 aa16.76■□□□□ 0.27
Ubr3-201ENSMUST00000055758 Sin3bQ62141 1098 aa16.75■□□□□ 0.27
Ubr3-201ENSMUST00000055758 Suclg2Q9Z2I8 433 aa16.75■□□□□ 0.27
Ubr3-201ENSMUST00000055758 Znf280cQ6P3Y5 742 aa16.75■□□□□ 0.27
Ubr3-201ENSMUST00000055758 Dis3l2Q8CI75 870 aaKnown RBP16.75■□□□□ 0.27
Ubr3-201ENSMUST00000055758 Chchd6Q91VN4 273 aa16.75■□□□□ 0.27
Ubr3-201ENSMUST00000055758 Rasgrp4Q8BTM9 673 aa16.75■□□□□ 0.27
Ubr3-201ENSMUST00000055758 Zscan12Q9Z1D7 501 aa16.75■□□□□ 0.27
Ubr3-201ENSMUST00000055758 Mysm1Q69Z66 819 aa16.75■□□□□ 0.27
Ubr3-201ENSMUST00000055758 ArpinQ9D0A3 226 aa16.75■□□□□ 0.27
Ubr3-201ENSMUST00000055758 PtprcP06800 1291 aa16.75■□□□□ 0.27
Ubr3-201ENSMUST00000055758 Hpcal4Q8BGZ1 191 aa16.75■□□□□ 0.27
Ubr3-201ENSMUST00000055758 Apopt1Q9CQW7 192 aa16.75■□□□□ 0.27
Ubr3-201ENSMUST00000055758 Smyd3Q9CWR2 428 aa16.75■□□□□ 0.27
Ubr3-201ENSMUST00000055758 Grtp1Q9D3N8 359 aa16.75■□□□□ 0.27
Ubr3-201ENSMUST00000055758 Cpsf3Q9QXK7 684 aa16.75■□□□□ 0.27
Ubr3-201ENSMUST00000055758 Pcsk1nQ9QXV0 258 aa16.75■□□□□ 0.27
Ubr3-201ENSMUST00000055758 Dnajc7Q9QYI3 494 aa16.75■□□□□ 0.27
Ubr3-201ENSMUST00000055758 Psma3O70435 255 aa16.74■□□□□ 0.27
Ubr3-201ENSMUST00000055758 HnrnprQ8VHM5 632 aaKnown RBP16.74■□□□□ 0.27
Ubr3-201ENSMUST00000055758 Slc4a9E9PUP3 929 aa16.74■□□□□ 0.27
Ubr3-201ENSMUST00000055758 Serpinb3aG3X9V8 387 aa16.74■□□□□ 0.27
Ubr3-201ENSMUST00000055758 MlxipQ2VPU4 917 aa16.74■□□□□ 0.27
Ubr3-201ENSMUST00000055758 Ppp1r13lQ5I1X5 824 aa16.74■□□□□ 0.27
Ubr3-201ENSMUST00000055758 Ddx17Q501J6 650 aaKnown RBP16.74■□□□□ 0.27
Ubr3-201ENSMUST00000055758 Unc5clQ6R653 518 aa16.74■□□□□ 0.27
Ubr3-201ENSMUST00000055758 Scyl3Q9DBQ7 735 aa16.74■□□□□ 0.27
Ubr3-201ENSMUST00000055758 Serpinb3cA2RSF9 386 aa16.74■□□□□ 0.27
Ubr3-201ENSMUST00000055758 Nlrp1aQ2LKU9 1182 aa16.74■□□□□ 0.27
Ubr3-201ENSMUST00000055758 Eepd1Q3TGW2 569 aa16.74■□□□□ 0.27
Ubr3-201ENSMUST00000055758 Swi5Q8K3D3 89 aa16.74■□□□□ 0.27
Ubr3-201ENSMUST00000055758 Kctd10Q922M3 315 aa16.74■□□□□ 0.27
Ubr3-201ENSMUST00000055758 Mfap3lQ9D3X9 409 aa16.74■□□□□ 0.27
Ubr3-201ENSMUST00000055758 Sh2d4aQ9D7V1 421 aa16.74■□□□□ 0.27
Ubr3-201ENSMUST00000055758 Rgs22G3UYX5 1258 aa16.74■□□□□ 0.27
Ubr3-201ENSMUST00000055758 Gap43P06837 227 aa16.74■□□□□ 0.27
Ubr3-201ENSMUST00000055758 HomezQ80W88 542 aa16.74■□□□□ 0.27
Ubr3-201ENSMUST00000055758 Habp4Q9JKS5 411 aaKnown RBP16.74■□□□□ 0.27
Ubr3-201ENSMUST00000055758 Mug2P28666 1451 aa16.74■□□□□ 0.27
Ubr3-201ENSMUST00000055758 Nlrp1bA1Z198 1177 aa16.74■□□□□ 0.27
Ubr3-201ENSMUST00000055758 4932429P05RikA2ADI4 785 aa16.74■□□□□ 0.27
Ubr3-201ENSMUST00000055758 Krt78E9Q0F0 1068 aa16.74■□□□□ 0.27
Ubr3-201ENSMUST00000055758 Smad1P70340 465 aa16.74■□□□□ 0.27
Ubr3-201ENSMUST00000055758 Trim43aQ3TL54 445 aa16.74■□□□□ 0.27
Ubr3-201ENSMUST00000055758 Usp44Q8C2S0 711 aa16.74■□□□□ 0.27
Ubr3-201ENSMUST00000055758 Vwa5aQ99KC8 793 aaKnown RBP16.74■□□□□ 0.27
Ubr3-201ENSMUST00000055758 Snrnp35Q9D384 244 aa16.74■□□□□ 0.27
Ubr3-201ENSMUST00000055758 Trappc8E9PWG2 1437 aa16.74■□□□□ 0.27
Ubr3-201ENSMUST00000055758 Gm43638A0A0J9YU36 694 aa16.74■□□□□ 0.27
Retrieved 100 of 22,080 RNA–protein pairs in 21.1 ms