RNA–Protein interactions for RNA: ENSMUST00000053317.11

Bdnf-201, Transcript of Brain-derived neurotrophic factor, mousemouse

TSL 1 (best) BASIC

Gene Bdnf, Length 4,266 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-201ENSMUST00000053317 FpgsP48760 587 aa7.61□□□□□ -1.19
Bdnf-201ENSMUST00000053317 RenbpP82343 430 aa7.61□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Mark3Q03141 753 aa7.61□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Slc9a2Q3ZAS0 814 aa7.61□□□□□ -1.19
Bdnf-201ENSMUST00000053317 3830417A13RikQ8BQJ2 303 aa7.61□□□□□ -1.19
Bdnf-201ENSMUST00000053317 NkrfQ8BY02 690 aaKnown RBP7.61□□□□□ -1.19
Bdnf-201ENSMUST00000053317 AclyQ91V92 1091 aaKnown RBP7.61□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Trim59Q922Y2 403 aa7.61□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Gnl2Q99LH1 728 aaKnown RBP7.61□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Arhgef25Q9CWR0 618 aa7.61□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Wfdc1Q9ESH5 211 aa7.61□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Sorbs3Q9R1Z8 733 aa7.61□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Kcnh3Q9WVJ0 1095 aa7.61□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Bnip3lQ9Z2F7 218 aa7.61□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Phrf1A6H619 1682 aa7.6□□□□□ -1.19
Bdnf-201ENSMUST00000053317 PcntP48725 2898 aa7.6□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Kdelc2G5E897 503 aa7.6□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Gbp4Q61107 620 aa7.6□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Vps37cQ8R105 352 aa7.6□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Wrap53Q8VC51 532 aa7.6□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Tspyl4Q8VD63 406 aa7.6□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Rtfdc1Q99K95 307 aa7.6□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Snx29Q9D3S3 818 aa7.6□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Col4a3bpQ9EQG9 624 aa7.6□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Pkd2l2Q9JLG4 621 aa7.6□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Myl7Q9QVP4 175 aa7.6□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Krt78E9Q0F0 1068 aa7.6□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Nck2O55033 380 aa7.6□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Casp14O89094 257 aa7.6□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Lta4hP24527 611 aa7.6□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Mnat1P51949 309 aa7.6□□□□□ -1.19
Bdnf-201ENSMUST00000053317 DSCC1Q14AI0 399 aa7.6□□□□□ -1.19
Bdnf-201ENSMUST00000053317 4933427I04RikQ3V053 235 aa7.6□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Igsf3Q6ZQA6 1194 aa7.6□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Maats1Q8BRC6 783 aa7.6□□□□□ -1.19
Bdnf-201ENSMUST00000053317 VcpkmtQ8C436 228 aa7.6□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Acot11Q8VHQ9 594 aa7.6□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Plcb4Q91UZ1 1175 aa7.6□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Atp6ap2Q9CYN9 350 aa7.6□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Arfgef1G3X9K3 1846 aaKnown RBP7.6□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Astn1Q61137 1302 aa7.6□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Cep126Q0VBV7 1103 aa7.6□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Eif3j1Q3UGC7 261 aaKnown RBP7.6□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Ppp1r26Q6A025 1163 aa7.6□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Abi1Q8CBW3 481 aa7.6□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Sgpl1Q8R0X7 568 aa7.6□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Dnajc28Q8VCE1 385 aa7.6□□□□□ -1.19
Bdnf-201ENSMUST00000053317 YwhabQ9CQV8 246 aaKnown RBP7.6□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Snx10Q9CWT3 201 aa7.6□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Chd1lQ9CXF7 900 aa7.6□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Tbx20Q9ES03 445 aa7.6□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Pdzrn4E9PUZ9 1014 aa7.59□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Timm44O35857 452 aa7.59□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Kiaa1328Q6NZK5 612 aa7.59□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Lrrc41Q8K1C9 807 aa7.59□□□□□ -1.19
Bdnf-201ENSMUST00000053317 OtoaQ8K561 1137 aa7.59□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Bud13Q8R149 637 aa7.59□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Hdhd5Q91WM2 419 aa7.59□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Dis3Q9CSH3 958 aaKnown RBP7.59□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Dicer1Q8R418 1916 aa7.59□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Vmn2r87E9PZX4 848 aa7.59□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Gm9857F7CXR1 130 aa7.59□□□□□ -1.19
Bdnf-201ENSMUST00000053317 P01734 135 aa7.59□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Irs1P35569 1233 aa7.59□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Psmc5P62196 406 aa7.59□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Ccna1Q61456 421 aa7.59□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Serpinb3dQ6UKZ0 387 aa7.59□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Sh3d21Q7TSG5 549 aa7.59□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Gprc5aQ8BHL4 356 aa7.59□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Amz1Q8BVF9 502 aa7.59□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Csde1Q91W50 798 aaKnown RBP7.59□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Rassf3Q99P51 232 aa7.59□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Calml3Q9D6P8 149 aa7.59□□□□□ -1.19
Bdnf-201ENSMUST00000053317 SelenooQ9DBC0 667 aa7.59□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Gm43738A0A0G2JEA5 862 aa7.59□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Fbxl16A2RT62 479 aa7.59□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Gm5134E9QAB5 671 aa7.59□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Ccr1P51675 355 aa7.59□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Lpar1P61793 364 aa7.59□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Ogfod1Q3U0K8 545 aa7.59□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Nom1Q3UFM5 854 aaKnown RBP7.59□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Mettl14Q3UIK4 456 aa7.59□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Ddr2Q62371 854 aa7.59□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Cep135Q6P5D4 1140 aa7.59□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Cracr2bQ80ZJ8 394 aa7.59□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Fbxl21Q8BFZ4 434 aa7.59□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Pan2Q8BGF7 1200 aaKnown RBP7.59□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Csgalnact2Q8C1F4 542 aa7.59□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Ces4aQ8R0W5 563 aa7.59□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Olfr390Q8VEZ7 311 aa7.59□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Pstpip2Q99M15 334 aa7.59□□□□□ -1.19
Bdnf-201ENSMUST00000053317 DonsonQ9QXP4 560 aa7.59□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Slc16a2O70324 545 aa7.58□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Acvr2bP27040 536 aa7.58□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Nucb2P81117 420 aa7.58□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Samd11Q1RNF8 542 aa7.58□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Naa35Q6PHQ8 725 aa7.58□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Slu7Q8BHJ9 585 aa7.58□□□□□ -1.2
Bdnf-201ENSMUST00000053317 ClmnQ8C5W0 1052 aa7.58□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Celf3Q8CIN6 465 aa7.58□□□□□ -1.2
Retrieved 100 of 22,080 RNA–protein pairs in 28.1 ms