RNA–Protein interactions for RNA: ENSMUST00000046207.8

Sf3b6-201, Transcript of Splicing factor 3B subunit 6, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sf3b6, Length 1,180 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6-201ENSMUST00000046207 Zmynd15Q8C0R7 736 aa17.46■□□□□ 0.39
Sf3b6-201ENSMUST00000046207 Smc5Q8CG46 1101 aaKnown RBP17.46■□□□□ 0.39
Sf3b6-201ENSMUST00000046207 Q922R1 422 aa17.46■□□□□ 0.39
Sf3b6-201ENSMUST00000046207 Cep89Q9CZX2 791 aa17.46■□□□□ 0.39
Sf3b6-201ENSMUST00000046207 Ly6g6dQ9Z1Q3 135 aa17.46■□□□□ 0.39
Sf3b6-201ENSMUST00000046207 Camk4P08414 469 aa17.45■□□□□ 0.38
Sf3b6-201ENSMUST00000046207 GlulP15105 373 aa17.45■□□□□ 0.38
Sf3b6-201ENSMUST00000046207 MafbP54841 323 aa17.45■□□□□ 0.38
Sf3b6-201ENSMUST00000046207 Gpatch11Q3UFS4 262 aa17.45■□□□□ 0.38
Sf3b6-201ENSMUST00000046207 Usp13Q5BKP2 858 aa17.45■□□□□ 0.38
Sf3b6-201ENSMUST00000046207 Nrg1Q6DR99 700 aa17.45■□□□□ 0.38
Sf3b6-201ENSMUST00000046207 Dlg1Q811D0 905 aaKnown RBP17.45■□□□□ 0.38
Sf3b6-201ENSMUST00000046207 Pms1Q8K119 917 aa17.45■□□□□ 0.38
Sf3b6-201ENSMUST00000046207 Vopp1Q8R1C3 172 aa17.45■□□□□ 0.38
Sf3b6-201ENSMUST00000046207 CrygnQ8VHL5 183 aa17.45■□□□□ 0.38
Sf3b6-201ENSMUST00000046207 Pramel1Q99MW3 458 aa17.45■□□□□ 0.38
Sf3b6-201ENSMUST00000046207 Pes1Q9EQ61 584 aaKnown RBP17.45■□□□□ 0.38
Sf3b6-201ENSMUST00000046207 Plxna4Q80UG2 1893 aa17.44■□□□□ 0.38
Sf3b6-201ENSMUST00000046207 Cyp2b23E9Q593 491 aa17.44■□□□□ 0.38
Sf3b6-201ENSMUST00000046207 Prr22F6TNE3 422 aa17.44■□□□□ 0.38
Sf3b6-201ENSMUST00000046207 Dsg3O35902 993 aa17.44■□□□□ 0.38
Sf3b6-201ENSMUST00000046207 Pde6bP23440 856 aa17.44■□□□□ 0.38
Sf3b6-201ENSMUST00000046207 SarsP26638 512 aaKnown RBP17.44■□□□□ 0.38
Sf3b6-201ENSMUST00000046207 Smad2Q62432 467 aa17.44■□□□□ 0.38
Sf3b6-201ENSMUST00000046207 Proser3Q7TSA6 634 aa17.44■□□□□ 0.38
Sf3b6-201ENSMUST00000046207 Sgsm2Q80U12 1005 aa17.44■□□□□ 0.38
Sf3b6-201ENSMUST00000046207 Tbc1d22bQ80VE5 505 aa17.44■□□□□ 0.38
Sf3b6-201ENSMUST00000046207 Tbc1d5Q80XQ2 815 aa17.44■□□□□ 0.38
Sf3b6-201ENSMUST00000046207 Samm50Q8BGH2 469 aa17.44■□□□□ 0.38
Sf3b6-201ENSMUST00000046207 Rtn1Q8K0T0 780 aa17.44■□□□□ 0.38
Sf3b6-201ENSMUST00000046207 Rtfdc1Q99K95 307 aa17.44■□□□□ 0.38
Sf3b6-201ENSMUST00000046207 SdhbQ9CQA3 282 aa17.44■□□□□ 0.38
Sf3b6-201ENSMUST00000046207 Cldnd1Q9CQX5 253 aa17.44■□□□□ 0.38
Sf3b6-201ENSMUST00000046207 Ccdc47Q9D024 483 aaKnown RBP17.44■□□□□ 0.38
Sf3b6-201ENSMUST00000046207 TheglQ9DA15 459 aa17.44■□□□□ 0.38
Sf3b6-201ENSMUST00000046207 SetQ9EQU5 289 aaKnown RBP17.44■□□□□ 0.38
Sf3b6-201ENSMUST00000046207 Lypla2Q9WTL7 231 aa17.44■□□□□ 0.38
Sf3b6-201ENSMUST00000046207 Vmn2r55G3UWZ4 781 aa17.43■□□□□ 0.38
Sf3b6-201ENSMUST00000046207 Vmn2r53L7N473 806 aa17.43■□□□□ 0.38
Sf3b6-201ENSMUST00000046207 Pbxip1Q3TVI8 727 aa17.43■□□□□ 0.38
Sf3b6-201ENSMUST00000046207 Ogfod1Q3U0K8 545 aa17.43■□□□□ 0.38
Sf3b6-201ENSMUST00000046207 Mars2Q499X9 586 aaKnown RBP17.43■□□□□ 0.38
Sf3b6-201ENSMUST00000046207 Cdca7lQ922M5 438 aa17.43■□□□□ 0.38
Sf3b6-201ENSMUST00000046207 Prpf3Q922U1 683 aaKnown RBP17.43■□□□□ 0.38
Sf3b6-201ENSMUST00000046207 Mgea5Q9EQQ9 916 aa17.43■□□□□ 0.38
Sf3b6-201ENSMUST00000046207 Eif4enif1Q9EST3 983 aaKnown RBP17.43■□□□□ 0.38
Sf3b6-201ENSMUST00000046207 PorcnQ9JJJ7 461 aa17.43■□□□□ 0.38
Sf3b6-201ENSMUST00000046207 Nr1h3Q9Z0Y9 445 aa17.43■□□□□ 0.38
Sf3b6-201ENSMUST00000046207 Cdc45Q9Z1X9 566 aa17.43■□□□□ 0.38
Sf3b6-201ENSMUST00000046207 Map7O88735 730 aa17.42■□□□□ 0.38
Sf3b6-201ENSMUST00000046207 Casp14O89094 257 aa17.42■□□□□ 0.38
Sf3b6-201ENSMUST00000046207 FasP25446 327 aa17.42■□□□□ 0.38
Sf3b6-201ENSMUST00000046207 Stat5aP42230 793 aa17.42■□□□□ 0.38
Sf3b6-201ENSMUST00000046207 Ccr1P51675 355 aa17.42■□□□□ 0.38
Sf3b6-201ENSMUST00000046207 Pkn1P70268 946 aa17.42■□□□□ 0.38
Sf3b6-201ENSMUST00000046207 Lig3P97386 1015 aa17.42■□□□□ 0.38
Sf3b6-201ENSMUST00000046207 Eif3j1Q3UGC7 261 aaKnown RBP17.42■□□□□ 0.38
Sf3b6-201ENSMUST00000046207 Fam196aQ3USH1 422 aa17.42■□□□□ 0.38
Sf3b6-201ENSMUST00000046207 Gemin4Q6P6L6 1058 aaKnown RBP17.42■□□□□ 0.38
Sf3b6-201ENSMUST00000046207 AtripQ8BMG1 785 aa17.42■□□□□ 0.38
Sf3b6-201ENSMUST00000046207 RtknQ8C6B2 564 aa17.42■□□□□ 0.38
Sf3b6-201ENSMUST00000046207 Kctd10Q922M3 315 aa17.42■□□□□ 0.38
Sf3b6-201ENSMUST00000046207 Map4k3Q99JP0 894 aa17.42■□□□□ 0.38
Sf3b6-201ENSMUST00000046207 Pabpc6Q9D4E6 643 aaKnown RBP17.42■□□□□ 0.38
Sf3b6-201ENSMUST00000046207 Tob2Q9JM55 345 aa17.42■□□□□ 0.38
Sf3b6-201ENSMUST00000046207 Gm38392E9Q2A2 434 aa17.41■□□□□ 0.38
Sf3b6-201ENSMUST00000046207 DgkaO88673 730 aa17.41■□□□□ 0.38
Sf3b6-201ENSMUST00000046207 Lamp2P17047 415 aa17.41■□□□□ 0.38
Sf3b6-201ENSMUST00000046207 Gna11P21278 359 aa17.41■□□□□ 0.38
Sf3b6-201ENSMUST00000046207 Sparcl1P70663 650 aa17.41■□□□□ 0.38
Sf3b6-201ENSMUST00000046207 Tarbp2P97473 365 aa17.41■□□□□ 0.38
Sf3b6-201ENSMUST00000046207 Ttc9Q3V038 219 aa17.41■□□□□ 0.38
Sf3b6-201ENSMUST00000046207 ItgaeQ60677 1167 aa17.41■□□□□ 0.38
Sf3b6-201ENSMUST00000046207 Cpa4Q6P8K8 420 aa17.41■□□□□ 0.38
Sf3b6-201ENSMUST00000046207 Drc7Q6V3W6 876 aa17.41■□□□□ 0.38
Sf3b6-201ENSMUST00000046207 Sun2Q8BJS4 731 aa17.41■□□□□ 0.38
Sf3b6-201ENSMUST00000046207 CnstQ8CBC4 711 aa17.41■□□□□ 0.38
Sf3b6-201ENSMUST00000046207 Rbm12Q8R4X3 992 aaKnown RBP17.41■□□□□ 0.38
Sf3b6-201ENSMUST00000046207 Tlr6Q9EPW9 795 aa17.41■□□□□ 0.38
Sf3b6-201ENSMUST00000046207 Ppp2r3cQ9JK24 453 aa17.41■□□□□ 0.38
Sf3b6-201ENSMUST00000046207 Gm28036V9GXJ1 658 aa17.41■□□□□ 0.38
Sf3b6-201ENSMUST00000046207 Nup210Q9QY81 1886 aaKnown RBP17.4■□□□□ 0.38
Sf3b6-201ENSMUST00000046207 Trim30bE9PVL6 203 aa17.4■□□□□ 0.38
Sf3b6-201ENSMUST00000046207 Tmem132bF7BAB2 1078 aa17.4■□□□□ 0.38
Sf3b6-201ENSMUST00000046207 Atp2b1G5E829 1220 aa17.4■□□□□ 0.38
Sf3b6-201ENSMUST00000046207 Ano7Q14AT5 859 aa17.4■□□□□ 0.38
Sf3b6-201ENSMUST00000046207 Mfhas1Q3V1N1 1048 aa17.4■□□□□ 0.38
Sf3b6-201ENSMUST00000046207 St18Q80TY4 1045 aa17.4■□□□□ 0.38
Sf3b6-201ENSMUST00000046207 Slc38a9Q8BGD6 560 aa17.4■□□□□ 0.38
Sf3b6-201ENSMUST00000046207 Ranbp6Q8BIV3 1105 aa17.4■□□□□ 0.38
Sf3b6-201ENSMUST00000046207 Dph6Q9CQ28 267 aa17.4■□□□□ 0.38
Sf3b6-201ENSMUST00000046207 Tbc1d15Q9CXF4 671 aa17.4■□□□□ 0.38
Sf3b6-201ENSMUST00000046207 Grb14Q9JLM9 538 aa17.4■□□□□ 0.38
Sf3b6-201ENSMUST00000046207 CtsfQ9R013 462 aa17.4■□□□□ 0.38
Sf3b6-201ENSMUST00000046207 CluhQ5SW19 1315 aa17.4■□□□□ 0.38
Sf3b6-201ENSMUST00000046207 Scn5aQ9JJV9 2019 aa17.39■□□□□ 0.37
Sf3b6-201ENSMUST00000046207 Slc16a2O70324 545 aa17.39■□□□□ 0.37
Sf3b6-201ENSMUST00000046207 DsppP97399 934 aa17.39■□□□□ 0.37
Sf3b6-201ENSMUST00000046207 Tatdn3Q3U1C6 294 aa17.39■□□□□ 0.37
Sf3b6-201ENSMUST00000046207 Fam214aQ69ZK7 1075 aa17.39■□□□□ 0.37
Retrieved 100 of 22,080 RNA–protein pairs in 21.2 ms