RNA–Protein interactions for RNA: ENSMUST00000038514.14

Nup54-201, Transcript of Nuclear pore complex protein Nup54, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup54, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54-201ENSMUST00000038514 Xirp1O70373 1129 aa16.35■□□□□ 0.21
Nup54-201ENSMUST00000038514 Fbln1Q08879 705 aa16.35■□□□□ 0.21
Nup54-201ENSMUST00000038514 Gm5935Q497S0 212 aa16.35■□□□□ 0.21
Nup54-201ENSMUST00000038514 Serpinb6Q60854 378 aa16.35■□□□□ 0.21
Nup54-201ENSMUST00000038514 Scnn1aQ61180 699 aa16.35■□□□□ 0.21
Nup54-201ENSMUST00000038514 Rps6ka6Q7TPS0 764 aa16.35■□□□□ 0.21
Nup54-201ENSMUST00000038514 Pja2Q80U04 707 aa16.35■□□□□ 0.21
Nup54-201ENSMUST00000038514 Pank4Q80YV4 820 aa16.35■□□□□ 0.21
Nup54-201ENSMUST00000038514 Rpap2Q8VC34 614 aa16.35■□□□□ 0.21
Nup54-201ENSMUST00000038514 Chn1Q91V57 459 aa16.35■□□□□ 0.21
Nup54-201ENSMUST00000038514 Scgb2b7D3YYY1 112 aa16.35■□□□□ 0.21
Nup54-201ENSMUST00000038514 Samd15F6XZJ7 620 aa16.35■□□□□ 0.21
Nup54-201ENSMUST00000038514 Mroh9G5E8L9 891 aa16.35■□□□□ 0.21
Nup54-201ENSMUST00000038514 Adam7O35227 789 aa16.35■□□□□ 0.21
Nup54-201ENSMUST00000038514 Pcdha4O88689 947 aa16.35■□□□□ 0.21
Nup54-201ENSMUST00000038514 Mucl2P02815 138 aa16.35■□□□□ 0.21
Nup54-201ENSMUST00000038514 Polr2fP61219 127 aa16.35■□□□□ 0.21
Nup54-201ENSMUST00000038514 Psd3Q2PFD7 1037 aa16.35■□□□□ 0.21
Nup54-201ENSMUST00000038514 Fam107bQ3TGF2 131 aa16.35■□□□□ 0.21
Nup54-201ENSMUST00000038514 Dcaf17Q3TUL7 519 aa16.35■□□□□ 0.21
Nup54-201ENSMUST00000038514 Cracr2aQ3UP38 310 aa16.35■□□□□ 0.21
Nup54-201ENSMUST00000038514 Klhdc9Q3USL1 350 aa16.35■□□□□ 0.21
Nup54-201ENSMUST00000038514 Rsad1Q5SUV1 442 aa16.35■□□□□ 0.21
Nup54-201ENSMUST00000038514 Ehbp1Q69ZW3 1231 aa16.35■□□□□ 0.21
Nup54-201ENSMUST00000038514 Armc6Q8BNU0 468 aa16.35■□□□□ 0.21
Nup54-201ENSMUST00000038514 Lrrc4cQ8C031 640 aa16.35■□□□□ 0.21
Nup54-201ENSMUST00000038514 Iws1Q8C1D8 766 aa16.35■□□□□ 0.21
Nup54-201ENSMUST00000038514 Ctage5Q8R311 779 aa16.35■□□□□ 0.21
Nup54-201ENSMUST00000038514 Slc5a4aQ9ET37 656 aa16.35■□□□□ 0.21
Nup54-201ENSMUST00000038514 Zfp213E9QAW0 468 aa16.34■□□□□ 0.21
Nup54-201ENSMUST00000038514 Klc1O88447 541 aa16.34■□□□□ 0.21
Nup54-201ENSMUST00000038514 Gdap1O88741 358 aa16.34■□□□□ 0.21
Nup54-201ENSMUST00000038514 H2afzP0C0S6 128 aa16.34■□□□□ 0.21
Nup54-201ENSMUST00000038514 Nedd1P33215 660 aa16.34■□□□□ 0.21
Nup54-201ENSMUST00000038514 H2afvQ3THW5 128 aa16.34■□□□□ 0.21
Nup54-201ENSMUST00000038514 Sf3b2Q3UJB0 878 aaKnown RBP16.34■□□□□ 0.21
Nup54-201ENSMUST00000038514 Tspyl3Q3UYP3 334 aa16.34■□□□□ 0.21
Nup54-201ENSMUST00000038514 Meis1Q60954 390 aa16.34■□□□□ 0.21
Nup54-201ENSMUST00000038514 FdxrQ61578 494 aa16.34■□□□□ 0.21
Nup54-201ENSMUST00000038514 Lilrb4Q64281 335 aa16.34■□□□□ 0.21
Nup54-201ENSMUST00000038514 Tm4sf1Q64302 202 aa16.34■□□□□ 0.21
Nup54-201ENSMUST00000038514 Tshz2Q68FE9 1030 aa16.34■□□□□ 0.21
Nup54-201ENSMUST00000038514 Cnot10Q8BH15 744 aa16.34■□□□□ 0.21
Nup54-201ENSMUST00000038514 DcakdQ8BHC4 231 aaKnown RBP16.34■□□□□ 0.21
Nup54-201ENSMUST00000038514 Psmd5Q8BJY1 504 aa16.34■□□□□ 0.21
Nup54-201ENSMUST00000038514 Strip1Q8C079 837 aa16.34■□□□□ 0.21
Nup54-201ENSMUST00000038514 Kiaa1024Q8K3V7 917 aa16.34■□□□□ 0.21
Nup54-201ENSMUST00000038514 Cbwd1Q8VEH6 393 aa16.34■□□□□ 0.21
Nup54-201ENSMUST00000038514 Pacsin2Q9WVE8 486 aaKnown RBP16.34■□□□□ 0.21
Nup54-201ENSMUST00000038514 Pex11aQ9Z211 246 aa16.34■□□□□ 0.21
Nup54-201ENSMUST00000038514 Myh10Q61879 1976 aaKnown RBP16.34■□□□□ 0.21
Nup54-201ENSMUST00000038514 Zfp984A2A7A2 547 aa16.34■□□□□ 0.21
Nup54-201ENSMUST00000038514 Vcam1P29533 739 aa16.34■□□□□ 0.21
Nup54-201ENSMUST00000038514 Tlr8P58682 1032 aa16.34■□□□□ 0.21
Nup54-201ENSMUST00000038514 Qrich1Q3UA37 777 aa16.34■□□□□ 0.21
Nup54-201ENSMUST00000038514 Rapgef1Q3UHC1 1224 aa16.34■□□□□ 0.21
Nup54-201ENSMUST00000038514 Pls1Q3V0K9 630 aa16.34■□□□□ 0.21
Nup54-201ENSMUST00000038514 EsrrbQ61539 433 aa16.34■□□□□ 0.21
Nup54-201ENSMUST00000038514 Slc51aQ8R000 340 aa16.34■□□□□ 0.21
Nup54-201ENSMUST00000038514 Dqx1Q924H9 718 aa16.34■□□□□ 0.21
Nup54-201ENSMUST00000038514 Mageb16Q9CWV4 363 aa16.34■□□□□ 0.21
Nup54-201ENSMUST00000038514 Rabl3Q9D4V7 236 aa16.34■□□□□ 0.21
Nup54-201ENSMUST00000038514 PpihQ9D868 188 aa16.34■□□□□ 0.21
Nup54-201ENSMUST00000038514 Trappc11B2RXC1 1133 aa16.33■□□□□ 0.2
Nup54-201ENSMUST00000038514 Trappc3O55013 180 aa16.33■□□□□ 0.2
Nup54-201ENSMUST00000038514 Irx1P81068 480 aa16.33■□□□□ 0.2
Nup54-201ENSMUST00000038514 Tmc3Q7TQ69 1130 aa16.33■□□□□ 0.2
Nup54-201ENSMUST00000038514 Celf4Q7TSY6 486 aa16.33■□□□□ 0.2
Nup54-201ENSMUST00000038514 Ccdc28aQ8CEI3 192 aa16.33■□□□□ 0.2
Nup54-201ENSMUST00000038514 Amhr2Q8K592 568 aa16.33■□□□□ 0.2
Nup54-201ENSMUST00000038514 PdhbQ9D051 359 aa16.33■□□□□ 0.2
Nup54-201ENSMUST00000038514 Tfr2Q9JKX3 798 aa16.33■□□□□ 0.2
Nup54-201ENSMUST00000038514 Myl7Q9QVP4 175 aa16.33■□□□□ 0.2
Nup54-201ENSMUST00000038514 Ankrd2Q9WV06 328 aa16.33■□□□□ 0.2
Nup54-201ENSMUST00000038514 1700003F12RikA2AKE5 210 aa16.33■□□□□ 0.2
Nup54-201ENSMUST00000038514 Proca1B0QZF7 307 aa16.33■□□□□ 0.2
Nup54-201ENSMUST00000038514 Krt36B1AQ75 473 aa16.33■□□□□ 0.2
Nup54-201ENSMUST00000038514 Ces1aE9PYP1 563 aa16.33■□□□□ 0.2
Nup54-201ENSMUST00000038514 Tmod1P49813 359 aa16.33■□□□□ 0.2
Nup54-201ENSMUST00000038514 Tbc1d9bQ5SVR0 1263 aa16.33■□□□□ 0.2
Nup54-201ENSMUST00000038514 Krt31Q61765 416 aa16.33■□□□□ 0.2
Nup54-201ENSMUST00000038514 Ppp2r2aQ6P1F6 447 aa16.33■□□□□ 0.2
Nup54-201ENSMUST00000038514 Mxd3Q80US8 206 aa16.33■□□□□ 0.2
Nup54-201ENSMUST00000038514 Cplx4Q80WM3 160 aa16.33■□□□□ 0.2
Nup54-201ENSMUST00000038514 Rnaseh2bQ80ZV0 308 aa16.33■□□□□ 0.2
Nup54-201ENSMUST00000038514 Lrrc45Q8CIM1 670 aa16.33■□□□□ 0.2
Nup54-201ENSMUST00000038514 PdxkQ8K183 312 aa16.33■□□□□ 0.2
Nup54-201ENSMUST00000038514 Fermt3Q8K1B8 665 aa16.33■□□□□ 0.2
Nup54-201ENSMUST00000038514 Ppp1r11Q8K1L5 131 aa16.33■□□□□ 0.2
Nup54-201ENSMUST00000038514 Dr1Q91WV0 176 aa16.33■□□□□ 0.2
Nup54-201ENSMUST00000038514 Psma8Q9CWH6 250 aa16.33■□□□□ 0.2
Nup54-201ENSMUST00000038514 1700017N19RikA0A087WPJ1 469 aa16.32■□□□□ 0.2
Nup54-201ENSMUST00000038514 R3hdm1E9Q9Q2 1135 aaKnown RBP16.32■□□□□ 0.2
Nup54-201ENSMUST00000038514 Lrrc36Q3V0M2 755 aa16.32■□□□□ 0.2
Nup54-201ENSMUST00000038514 Zbed4Q80WQ9 1168 aa16.32■□□□□ 0.2
Nup54-201ENSMUST00000038514 Efcab14Q8BGQ6 484 aa16.32■□□□□ 0.2
Nup54-201ENSMUST00000038514 Fam228aQ8CDW1 299 aa16.32■□□□□ 0.2
Nup54-201ENSMUST00000038514 Scyl2Q8CFE4 930 aa16.32■□□□□ 0.2
Nup54-201ENSMUST00000038514 Qtrt2B8ZXI1 415 aa16.31■□□□□ 0.2
Nup54-201ENSMUST00000038514 Nova2D3YVV7 556 aaKnown RBP16.31■□□□□ 0.2
Retrieved 100 of 22,080 RNA–protein pairs in 24.2 ms