RNA–Protein interactions for RNA: ENSMUST00000035935.8

Ccdc40-201, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc40, Length 4,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-201ENSMUST00000035935 Gm1758F6VZZ1 202 aa11.1□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Ugt1a6bK9J7B2 531 aa11.1□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Syne3Q4FZC9 975 aa11.1□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Ugt1a6Q64435 531 aa11.1□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Senp6Q6P7W0 1132 aa11.1□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Ugt1a7cQ6ZQM8 531 aa11.1□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Usp17leQ7M764 540 aa11.1□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Hpcal4Q8BGZ1 191 aa11.1□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Bud13Q8R149 637 aa11.1□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Trim42Q9D2H5 723 aa11.1□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Sgk1Q9WVC6 431 aa11.1□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Fxr2Q9WVR4 673 aaKnown RBP11.1□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Gadd45gQ9Z111 159 aa11.1□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Taf4bG5E8Z2 855 aa11.1□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 RaraP11416 462 aa11.1□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Snai1Q02085 264 aa11.1□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Vwa3aQ3UVV9 1148 aa11.1□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Q66JV7 365 aa11.1□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 GmipQ6PGG2 971 aa11.1□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Cnksr2Q80YA9 1032 aa11.1□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Klhl11Q8CE33 709 aa11.1□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Prpsap2Q8R574 369 aa11.1□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Akt1s1Q9D1F4 257 aa11.1□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Fmnl1Q9JL26 1094 aa11.1□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Crb1Q8VHS2 1405 aa11.1□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Eef1bO70251 225 aaKnown RBP11.09□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Ap1m1P35585 423 aa11.09□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Mybl1P51960 751 aa11.09□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 RbsnQ80Y56 783 aa11.09□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Znf467Q8JZL0 594 aa11.09□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Tmem60Q8K174 133 aa11.09□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 CtsqQ91ZF4 343 aa11.09□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Rfc4Q99J62 364 aa11.09□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Cmtm5Q9D6G9 156 aa11.09□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Orc3Q9JK30 715 aaKnown RBP11.09□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 ErmardE9Q048 622 aa11.09□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Hmx1O70218 332 aa11.09□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 D1Pas1P16381 660 aa11.09□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Snap25P60879 206 aa11.09□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Nlrp4cQ3TKR3 982 aa11.09□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Miga1Q4QQM5 600 aa11.09□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Zbtb8osQ505B7 168 aa11.09□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Gdap1l1Q8VE33 370 aa11.09□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Srgap2Q91Z67 1071 aa11.09□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Dkc1Q9ESX5 509 aaKnown RBP11.09□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Gm3415J3QMS8 315 aa11.09□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Per2O54943 1257 aa11.09□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Hoxc10P31257 342 aa11.09□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Psmc4P54775 418 aa11.09□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 InhbaQ04998 424 aa11.09□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Tbc1d30Q69ZT9 766 aa11.09□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Peg10Q7TN75 958 aaKnown RBP11.09□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Olfr832Q7TRG9 312 aa11.09□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Slitrk3Q810B9 980 aa11.09□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 4933409G03RikQ8C5U0 320 aa11.09□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Gm3404Q9D506 307 aa11.09□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 4921524L21RikQ9D5T2 438 aa11.09□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Nova2D3YVV7 556 aaKnown RBP11.09□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Fam129cD3YZB0 591 aa11.09□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Psmc5P62196 406 aa11.09□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 E2f8Q58FA4 860 aa11.09□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Gprasp2Q8BUY8 826 aa11.09□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Kcnq3Q8K3F6 873 aa11.09□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Rpa3Q9CQ71 121 aa11.09□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Rbm31yQ9D3U4 565 aa11.09□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Cse1lQ9ERK4 971 aaKnown RBP11.09□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 HnrnpcQ9Z204 313 aaKnown RBP11.09□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Adgrf5G5E8Q8 1348 aa11.09□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 LbrQ3U9G9 626 aaKnown RBP11.08□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Mars2Q499X9 586 aaKnown RBP11.08□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Vps41Q5KU39 853 aa11.08□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Kif11Q6P9P6 1052 aa11.08□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Supt20hQ7TT00 530 aaKnown RBP11.08□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Tgm5Q9D7I9 724 aa11.08□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Rpf2Q9JJ80 306 aaKnown RBP11.08□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Prkab1Q9R078 270 aa11.08□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Slit1Q80TR4 1531 aa11.08□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Gm3893E9Q1I1 302 aa11.08□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 ZfxP17012 799 aa11.08□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Nsun7Q14AW5 724 aa11.08□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Sec31aQ3UPL0 1230 aaKnown RBP11.08□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Krt31Q61765 416 aa11.08□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 OcrlQ6NVF0 900 aa11.08□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Spata17Q9D552 379 aa11.08□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Tnrc6bQ8BKI2 1810 aaKnown RBP11.08□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Nup153E9Q3G8 1462 aaKnown RBP11.08□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Bcl9Q9D219 1425 aa11.08□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Tex13c2A0A0G2JGA3 530 aa11.08□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Gm11985A0A1B0GS61 206 aa11.08□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 A430078G23RikE9Q7Y4 484 aa11.08□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Psmd14O35593 310 aa11.08□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Cyp2d10P24456 504 aa11.08□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Gfpt1P47856 697 aa11.08□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Cacnb3P54285 484 aa11.08□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Eepd1Q3TGW2 569 aa11.08□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Cyp2c67Q569X9 491 aa11.08□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Zbtb39Q6PDK0 712 aa11.08□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Atp6v0d2Q80SY3 350 aa11.08□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Prc1Q99K43 603 aaKnown RBP11.08□□□□□ -0.64
Ccdc40-201ENSMUST00000035935 Drap1Q9D6N5 205 aa11.08□□□□□ -0.64
Retrieved 100 of 22,080 RNA–protein pairs in 38.1 ms