RNA–Protein interactions for RNA: ENSMUST00000002708.4

Shh-201, Transcript of Sonic hedgehog protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shh, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shh-201ENSMUST00000002708 Tfr2Q9JKX3 798 aa17.95■□□□□ 0.46
Shh-201ENSMUST00000002708 Usp14Q9JMA1 493 aaKnown RBP17.95■□□□□ 0.46
Shh-201ENSMUST00000002708 DexiQ9WUQ7 95 aa17.95■□□□□ 0.46
Shh-201ENSMUST00000002708 Pacsin2Q9WVE8 486 aaKnown RBP17.95■□□□□ 0.46
Shh-201ENSMUST00000002708 Dock2Q8C3J5 1828 aa17.95■□□□□ 0.46
Shh-201ENSMUST00000002708 Ctnnd1P30999 938 aaKnown RBP17.94■□□□□ 0.46
Shh-201ENSMUST00000002708 Gm5169Q5M8P2 212 aa17.94■□□□□ 0.46
Shh-201ENSMUST00000002708 Gpr101Q80T62 511 aa17.94■□□□□ 0.46
Shh-201ENSMUST00000002708 Rassf2Q8BMS9 326 aa17.94■□□□□ 0.46
Shh-201ENSMUST00000002708 Usp38Q8BW70 1042 aa17.94■□□□□ 0.46
Shh-201ENSMUST00000002708 H6pdQ8CFX1 789 aa17.94■□□□□ 0.46
Shh-201ENSMUST00000002708 Galnt15Q9D2N8 638 aa17.94■□□□□ 0.46
Shh-201ENSMUST00000002708 Styxl1Q9DAR2 321 aa17.94■□□□□ 0.46
Shh-201ENSMUST00000002708 Prkab1Q9R078 270 aa17.94■□□□□ 0.46
Shh-201ENSMUST00000002708 Prpf40aQ9R1C7 953 aaKnown RBP17.94■□□□□ 0.46
Shh-201ENSMUST00000002708 Ankrd2Q9WV06 328 aa17.94■□□□□ 0.46
Shh-201ENSMUST00000002708 Ttc38A3KMP2 465 aa17.94■□□□□ 0.46
Shh-201ENSMUST00000002708 Kcnu1O54982 1121 aa17.94■□□□□ 0.46
Shh-201ENSMUST00000002708 Ncf1Q09014 390 aa17.94■□□□□ 0.46
Shh-201ENSMUST00000002708 Q32P12 615 aa17.94■□□□□ 0.46
Shh-201ENSMUST00000002708 Dpcr1Q3TNW5 500 aa17.94■□□□□ 0.46
Shh-201ENSMUST00000002708 Trip13Q3UA06 432 aa17.94■□□□□ 0.46
Shh-201ENSMUST00000002708 Tsga10Q6NY15 697 aa17.94■□□□□ 0.46
Shh-201ENSMUST00000002708 Ddx31Q6NZQ2 687 aaKnown RBP17.94■□□□□ 0.46
Shh-201ENSMUST00000002708 Nap1l4Q78ZA7 375 aaKnown RBP17.94■□□□□ 0.46
Shh-201ENSMUST00000002708 Celf4Q7TSY6 486 aa17.94■□□□□ 0.46
Shh-201ENSMUST00000002708 FtoQ8BGW1 502 aa17.94■□□□□ 0.46
Shh-201ENSMUST00000002708 Slc4a8Q8JZR6 1089 aa17.94■□□□□ 0.46
Shh-201ENSMUST00000002708 F11Q91Y47 624 aa17.94■□□□□ 0.46
Shh-201ENSMUST00000002708 Senp2Q91ZX6 588 aa17.94■□□□□ 0.46
Shh-201ENSMUST00000002708 Sertad2Q9JJG5 309 aa17.94■□□□□ 0.46
Shh-201ENSMUST00000002708 Mroh9G5E8L9 891 aa17.94■□□□□ 0.46
Shh-201ENSMUST00000002708 AurkbO70126 345 aa17.94■□□□□ 0.46
Shh-201ENSMUST00000002708 Xirp1O70373 1129 aa17.94■□□□□ 0.46
Shh-201ENSMUST00000002708 Il13ra2O88786 383 aa17.94■□□□□ 0.46
Shh-201ENSMUST00000002708 Nr2f2P43135 414 aa17.94■□□□□ 0.46
Shh-201ENSMUST00000002708 Rbm46P86049 533 aa17.94■□□□□ 0.46
Shh-201ENSMUST00000002708 Rasip1Q3U0S6 961 aa17.94■□□□□ 0.46
Shh-201ENSMUST00000002708 Lamc2Q61092 1191 aa17.94■□□□□ 0.46
Shh-201ENSMUST00000002708 Ccpg1Q640L3 753 aa17.94■□□□□ 0.46
Shh-201ENSMUST00000002708 Fbxo11Q7TPD1 930 aaKnown RBP17.94■□□□□ 0.46
Shh-201ENSMUST00000002708 R3hdm2Q80TM6 1044 aaKnown RBP17.94■□□□□ 0.46
Shh-201ENSMUST00000002708 Lrp2bpQ9D4C6 346 aa17.94■□□□□ 0.46
Shh-201ENSMUST00000002708 BcamQ9R069 622 aa17.94■□□□□ 0.46
Shh-201ENSMUST00000002708 AdkP55264 361 aa17.93■□□□□ 0.46
Shh-201ENSMUST00000002708 Dcaf17Q3TUL7 519 aa17.93■□□□□ 0.46
Shh-201ENSMUST00000002708 Krt35Q497I4 455 aa17.93■□□□□ 0.46
Shh-201ENSMUST00000002708 Il17cQ8K4C5 194 aa17.93■□□□□ 0.46
Shh-201ENSMUST00000002708 Dusp19Q8K4T5 220 aa17.93■□□□□ 0.46
Shh-201ENSMUST00000002708 Ddx25Q9QY15 484 aa17.93■□□□□ 0.46
Shh-201ENSMUST00000002708 Gm28036V9GXJ1 658 aa17.93■□□□□ 0.46
Shh-201ENSMUST00000002708 Ambra1A2AH22 1300 aa17.93■□□□□ 0.46
Shh-201ENSMUST00000002708 Zfp174B9EJW5 407 aa17.93■□□□□ 0.46
Shh-201ENSMUST00000002708 Csf1rP09581 977 aa17.93■□□□□ 0.46
Shh-201ENSMUST00000002708 OatP29758 439 aa17.93■□□□□ 0.46
Shh-201ENSMUST00000002708 Klrg2Q3UM83 387 aa17.93■□□□□ 0.46
Shh-201ENSMUST00000002708 Cacna2d4Q5RJF7 1116 aa17.93■□□□□ 0.46
Shh-201ENSMUST00000002708 Fbxw10Q5SUS0 1030 aa17.93■□□□□ 0.46
Shh-201ENSMUST00000002708 Hdac10Q6P3E7 666 aa17.93■□□□□ 0.46
Shh-201ENSMUST00000002708 Fnbp4Q6ZQ03 1031 aa17.93■□□□□ 0.46
Shh-201ENSMUST00000002708 Llgl1Q80Y17 1036 aa17.93■□□□□ 0.46
Shh-201ENSMUST00000002708 Calhm4Q8CE93 315 aa17.93■□□□□ 0.46
Shh-201ENSMUST00000002708 BlmhQ8R016 455 aa17.93■□□□□ 0.46
Shh-201ENSMUST00000002708 Plekhg6Q8R0J1 787 aa17.93■□□□□ 0.46
Shh-201ENSMUST00000002708 Calr3Q9D9Q6 380 aa17.93■□□□□ 0.46
Shh-201ENSMUST00000002708 Cpsf2O35218 782 aaKnown RBP17.92■□□□□ 0.46
Shh-201ENSMUST00000002708 SlmapQ3URD3 845 aa17.92■□□□□ 0.46
Shh-201ENSMUST00000002708 Ddx10Q80Y44 875 aaKnown RBP17.92■□□□□ 0.46
Shh-201ENSMUST00000002708 Rbm41Q8JZV4 413 aa17.92■□□□□ 0.46
Shh-201ENSMUST00000002708 Q9D5Q8 446 aa17.92■□□□□ 0.46
Shh-201ENSMUST00000002708 Pex11aQ9Z211 246 aa17.92■□□□□ 0.46
Shh-201ENSMUST00000002708 Wdr72D3YYM4 1114 aa17.92■□□□□ 0.46
Shh-201ENSMUST00000002708 Rps6ka1P18653 724 aa17.92■□□□□ 0.46
Shh-201ENSMUST00000002708 Polr2fP61219 127 aa17.92■□□□□ 0.46
Shh-201ENSMUST00000002708 Rapgef1Q3UHC1 1224 aa17.92■□□□□ 0.46
Shh-201ENSMUST00000002708 Nr2e1Q64104 385 aa17.92■□□□□ 0.46
Shh-201ENSMUST00000002708 Ttc7aQ8BGB2 858 aa17.92■□□□□ 0.46
Shh-201ENSMUST00000002708 Fam187aQ9D3R5 417 aa17.92■□□□□ 0.46
Shh-201ENSMUST00000002708 Rabl3Q9D4V7 236 aa17.92■□□□□ 0.46
Shh-201ENSMUST00000002708 Actn2Q9JI91 894 aa17.92■□□□□ 0.46
Shh-201ENSMUST00000002708 Hyou1Q9JKR6 999 aaKnown RBP17.92■□□□□ 0.46
Shh-201ENSMUST00000002708 Gkap1Q9JMB0 366 aa17.92■□□□□ 0.46
Shh-201ENSMUST00000002708 Zfp984A2A7A2 547 aa17.91■□□□□ 0.46
Shh-201ENSMUST00000002708 RelaQ04207 549 aa17.91■□□□□ 0.46
Shh-201ENSMUST00000002708 Tnfaip8l3Q3TBL6 204 aa17.91■□□□□ 0.46
Shh-201ENSMUST00000002708 Ddx49Q4FZF3 480 aaKnown RBP17.91■□□□□ 0.46
Shh-201ENSMUST00000002708 Anks6Q6GQX6 883 aa17.91■□□□□ 0.46
Shh-201ENSMUST00000002708 Dcaf8Q8N7N5 591 aa17.91■□□□□ 0.46
Shh-201ENSMUST00000002708 Ces4aQ8R0W5 563 aa17.91■□□□□ 0.46
Shh-201ENSMUST00000002708 Dqx1Q924H9 718 aa17.91■□□□□ 0.46
Shh-201ENSMUST00000002708 Aipl1Q924K1 328 aa17.91■□□□□ 0.46
Shh-201ENSMUST00000002708 Myl7Q9QVP4 175 aa17.91■□□□□ 0.46
Shh-201ENSMUST00000002708 Eif2ak1Q9Z2R9 619 aa17.91■□□□□ 0.46
Shh-201ENSMUST00000002708 StrcQ8VIM6 1809 aa17.91■□□□□ 0.46
Shh-201ENSMUST00000002708 Esr2O08537 530 aa17.91■□□□□ 0.46
Shh-201ENSMUST00000002708 Cetn3O35648 167 aa17.91■□□□□ 0.46
Shh-201ENSMUST00000002708 Flt3Q00342 1000 aa17.91■□□□□ 0.46
Shh-201ENSMUST00000002708 Xxylt1Q3U4G3 392 aa17.91■□□□□ 0.46
Shh-201ENSMUST00000002708 Git1Q68FF6 770 aa17.91■□□□□ 0.46
Shh-201ENSMUST00000002708 PodnQ7TQ62 611 aa17.91■□□□□ 0.46
Retrieved 100 of 22,080 RNA–protein pairs in 66.9 ms