RNA–Protein interactions for RNA: YPL030W

TRM44, Transcript of tRNA(Ser) Um(44) 2'-O-methyltransferase, yeast

Gene TRM44, Length 1,704 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TRM44	YPL030W	URH1	Q04179	340 aa		4.28	□□□□□ -1.72
TRM44	YPL030W	YMR253C	Q04835	414 aa		4.28	□□□□□ -1.72
TRM44	YPL030W	NGL1	Q08213	363 aa	Known RBP	4.28	□□□□□ -1.72
TRM44	YPL030W	CWC2	Q12046	339 aa	Predicted RBP	4.28	□□□□□ -1.72
TRM44	YPL030W	ATP14	Q12349	124 aa		4.28	□□□□□ -1.72
TRM44	YPL030W	PDH1	Q12428	516 aa	Known RBP	4.28	□□□□□ -1.72
TRM44	YPL030W	YPR1	Q12458	312 aa		4.28	□□□□□ -1.72
TRM44	YPL030W	DCP1	Q12517	231 aa	Predicted RBP	4.28	□□□□□ -1.72
TRM44	YPL030W	SWI5	P08153	709 aa		4.27	□□□□□ -1.73
TRM44	YPL030W	CBS1	P14066	229 aa		4.27	□□□□□ -1.73
TRM44	YPL030W	YUR1	P26725	428 aa		4.27	□□□□□ -1.73
TRM44	YPL030W	IRE1	P32361	1115 aa		4.27	□□□□□ -1.73
TRM44	YPL030W	APE2	P32454	952 aa	Known RBP	4.27	□□□□□ -1.73
TRM44	YPL030W	LIP5	P32875	414 aa		4.27	□□□□□ -1.73
TRM44	YPL030W	MTH1	P35198	433 aa		4.27	□□□□□ -1.73
TRM44	YPL030W	CSG2	P35206	410 aa		4.27	□□□□□ -1.73
TRM44	YPL030W	ECM13	P38195	257 aa		4.27	□□□□□ -1.73
TRM44	YPL030W	YPT31	P38555	223 aa	Known RBP	4.27	□□□□□ -1.73
TRM44	YPL030W	WSS1	P38838	269 aa		4.27	□□□□□ -1.73
TRM44	YPL030W	GIP2	P40036	548 aa		4.27	□□□□□ -1.73
TRM44	YPL030W	RFC4	P40339	323 aa	Known RBP	4.27	□□□□□ -1.73
TRM44	YPL030W	AIR1	P40507	360 aa	Known RBP	4.27	□□□□□ -1.73
TRM44	YPL030W	MAD2	P40958	196 aa		4.27	□□□□□ -1.73
TRM44	YPL030W	MOG1	P47123	218 aa		4.27	□□□□□ -1.73
TRM44	YPL030W	YJR120W	P47157	116 aa		4.27	□□□□□ -1.73
TRM44	YPL030W	HLJ1	P48353	224 aa		4.27	□□□□□ -1.73
TRM44	YPL030W	MRK1	P50873	501 aa		4.27	□□□□□ -1.73
TRM44	YPL030W	RRP46	P53256	223 aa	Predicted RBP	4.27	□□□□□ -1.73
TRM44	YPL030W	BUD32	P53323	261 aa		4.27	□□□□□ -1.73
TRM44	YPL030W	IDP3	P53982	420 aa	Known RBP	4.27	□□□□□ -1.73
TRM44	YPL030W	REG1	Q00816	1014 aa		4.27	□□□□□ -1.73
TRM44	YPL030W	DYN2	Q02647	92 aa		4.27	□□□□□ -1.73
TRM44	YPL030W	ROY1	Q04847	553 aa		4.27	□□□□□ -1.73
TRM44	YPL030W	MSC3	Q05812	728 aa		4.27	□□□□□ -1.73
TRM44	YPL030W	FRQ1	Q06389	190 aa		4.27	□□□□□ -1.73
TRM44	YPL030W	RAD34	Q06665	692 aa		4.27	□□□□□ -1.73
TRM44	YPL030W	CRT10	Q08226	957 aa		4.27	□□□□□ -1.73
TRM44	YPL030W	SNX3	Q08826	162 aa	Known RBP	4.27	□□□□□ -1.73
TRM44	YPL030W	GUP2	Q08929	609 aa		4.27	□□□□□ -1.73
TRM44	YPL030W	SRL2	Q12020	392 aa		4.27	□□□□□ -1.73
TRM44	YPL030W	YOR283W	Q12040	230 aa	Known RBP	4.27	□□□□□ -1.73
TRM44	YPL030W	LPX1	Q12405	387 aa	Known RBP	4.27	□□□□□ -1.73
TRM44	YPL030W	MLP1	Q02455	1875 aa	Known RBP	4.27	□□□□□ -1.73
TRM44	YPL030W	GAL80	P04387	435 aa		4.26	□□□□□ -1.73
TRM44	YPL030W	HIS5	P07172	385 aa		4.26	□□□□□ -1.73
TRM44	YPL030W	CAP2	P13517	287 aa		4.26	□□□□□ -1.73
TRM44	YPL030W	SPO12	P17123	173 aa		4.26	□□□□□ -1.73
TRM44	YPL030W	EXO70	P19658	623 aa		4.26	□□□□□ -1.73
TRM44	YPL030W	EXG1	P23776	448 aa	Known RBP	4.26	□□□□□ -1.73
TRM44	YPL030W	STE50	P25344	346 aa		4.26	□□□□□ -1.73
TRM44	YPL030W	CHA1	P25379	360 aa	Known RBP	4.26	□□□□□ -1.73
TRM44	YPL030W	URA7	P28274	579 aa	Known RBP	4.26	□□□□□ -1.73
TRM44	YPL030W	CTS1	P29029	562 aa		4.26	□□□□□ -1.73
TRM44	YPL030W	DGR2	P32330	852 aa		4.26	□□□□□ -1.73
TRM44	YPL030W	RGT1	P32862	1170 aa		4.26	□□□□□ -1.73
TRM44	YPL030W	ECT1	P33412	323 aa		4.26	□□□□□ -1.73
TRM44	YPL030W	SRB2	P34162	210 aa		4.26	□□□□□ -1.73
TRM44	YPL030W	TVP38	P36164	337 aa		4.26	□□□□□ -1.73
TRM44	YPL030W	SHM2	P37291	469 aa	Known RBP	4.26	□□□□□ -1.73
TRM44	YPL030W	YBR285W	P38354	144 aa		4.26	□□□□□ -1.73
TRM44	YPL030W	URA8	P38627	578 aa	Predicted RBP	4.26	□□□□□ -1.73
TRM44	YPL030W	BIG1	P38813	335 aa		4.26	□□□□□ -1.73
TRM44	YPL030W	YMR147W	P40218	223 aa	Known RBP	4.26	□□□□□ -1.73
TRM44	YPL030W	YJL107C	P42947	387 aa		4.26	□□□□□ -1.73
TRM44	YPL030W	GAT1	P43574	510 aa		4.26	□□□□□ -1.73
TRM44	YPL030W	AAD10	P47182	288 aa		4.26	□□□□□ -1.73
TRM44	YPL030W	AZR1	P50080	613 aa		4.26	□□□□□ -1.73
TRM44	YPL030W	USE1	P53146	245 aa		4.26	□□□□□ -1.73
TRM44	YPL030W	ASI2	P53895	289 aa		4.26	□□□□□ -1.73
TRM44	YPL030W	HXT11	P54862	567 aa		4.26	□□□□□ -1.73
TRM44	YPL030W	CTL1	Q03220	320 aa	Known RBP	4.26	□□□□□ -1.73
TRM44	YPL030W	PFA5	Q03289	374 aa		4.26	□□□□□ -1.73
TRM44	YPL030W	EBS1	Q03466	884 aa	Known RBP	4.26	□□□□□ -1.73
TRM44	YPL030W	TDA1	Q03533	586 aa		4.26	□□□□□ -1.73
TRM44	YPL030W	YML037C	Q03703	340 aa		4.26	□□□□□ -1.73
TRM44	YPL030W	MUS81	Q04149	632 aa	Predicted RBP	4.26	□□□□□ -1.73
TRM44	YPL030W	YDR124W	Q04608	324 aa		4.26	□□□□□ -1.73
TRM44	YPL030W	HOF1	Q05080	669 aa		4.26	□□□□□ -1.73
TRM44	YPL030W	PEX30	Q06169	523 aa		4.26	□□□□□ -1.73
TRM44	YPL030W	EMG1	Q06287	252 aa	Known RBP	4.26	□□□□□ -1.73
TRM44	YPL030W	CBC2	Q08920	208 aa	Known RBP RIP-Chip data	4.26	□□□□□ -1.73	not detected
TRM44	YPL030W	YDR262W	Q12331	272 aa		4.26	□□□□□ -1.73
TRM44	YPL030W	ECM3	Q99252	613 aa		4.26	□□□□□ -1.73
TRM44	YPL030W	FRT1	Q99332	602 aa		4.26	□□□□□ -1.73
TRM44	YPL030W	VTH1	P40438	1549 aa		4.26	□□□□□ -1.73
TRM44	YPL030W	VTH2	P40890	1549 aa		4.26	□□□□□ -1.73
TRM44	YPL030W	FAS2	P19097	1887 aa	Known RBP	4.26	□□□□□ -1.73
TRM44	YPL030W	DUR1,2	P32528	1835 aa	Known RBP	4.26	□□□□□ -1.73
TRM44	YPL030W	STE2	D6VTK4	431 aa		4.26	□□□□□ -1.73
TRM44	YPL030W	COX4	P04037	155 aa		4.26	□□□□□ -1.73
TRM44	YPL030W	CDC7	P06243	507 aa		4.26	□□□□□ -1.73
TRM44	YPL030W	PUT2	P07275	575 aa		4.26	□□□□□ -1.73
TRM44	YPL030W	SPS2	P08459	502 aa		4.26	□□□□□ -1.73
TRM44	YPL030W	NAM2	P11325	894 aa		4.26	□□□□□ -1.73
TRM44	YPL030W	GRX2	P17695	143 aa	Known RBP	4.26	□□□□□ -1.73
TRM44	YPL030W	MIH1	P23748	554 aa		4.26	□□□□□ -1.73
TRM44	YPL030W	SBA1	P28707	216 aa	Known RBP	4.26	□□□□□ -1.73
TRM44	YPL030W	LDS1	P31379	325 aa		4.26	□□□□□ -1.73
TRM44	YPL030W	AFG1	P32317	509 aa		4.26	□□□□□ -1.73
TRM44	YPL030W	HBS1	P32769	611 aa	Known RBP	4.26	□□□□□ -1.73

Retrieved 100 of 5,963 RNA–protein pairs in 36.5 ms