RNA–Protein interactions for RNA: YNR006W

VPS27, Transcript of Endosomal protein that forms a complex with Hse1p, yeastyeast

Gene VPS27, Length 1,869 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS27YNR006W MCH4Q08268 501 aa3.64□□□□□ -1.83
VPS27YNR006W YOR389WQ08912 624 aa3.64□□□□□ -1.83
VPS27YNR006W FSH3Q99369 266 aa3.64□□□□□ -1.83
VPS27YNR006W MSF1P08425 469 aa3.63□□□□□ -1.83
VPS27YNR006W POL30P15873 258 aaKnown RBP3.63□□□□□ -1.83
VPS27YNR006W GSY2P27472 705 aa3.63□□□□□ -1.83
VPS27YNR006W MGM101P32787 269 aaKnown RBP3.63□□□□□ -1.83
VPS27YNR006W CBF5P33322 483 aaKnown RBP RIP-Chip data3.63□□□□□ -1.83not detected
VPS27YNR006W YKL097CP34245 136 aa3.63□□□□□ -1.83
VPS27YNR006W SPT10P35208 640 aa3.63□□□□□ -1.83
VPS27YNR006W YKR015CP36111 568 aa3.63□□□□□ -1.83
VPS27YNR006W LAG1P38703 411 aa3.63□□□□□ -1.83
VPS27YNR006W SIP3P38717 1229 aa3.63□□□□□ -1.83
VPS27YNR006W PHO90P39535 881 aa3.63□□□□□ -1.83
VPS27YNR006W YER079WP40052 210 aaKnown RBP3.63□□□□□ -1.83
VPS27YNR006W SNL1P40548 159 aa3.63□□□□□ -1.83
VPS27YNR006W PGA2P53903 129 aa3.63□□□□□ -1.83
VPS27YNR006W KTR6P54070 446 aa3.63□□□□□ -1.83
VPS27YNR006W COX20Q04935 205 aa3.63□□□□□ -1.83
VPS27YNR006W CTS2Q06350 511 aa3.63□□□□□ -1.83
VPS27YNR006W GPN3Q06543 272 aa3.63□□□□□ -1.83
VPS27YNR006W RPL24AP04449 155 aaKnown RBP3.62□□□□□ -1.83
VPS27YNR006W DST1P07273 309 aa3.62□□□□□ -1.83
VPS27YNR006W RPI1P23250 407 aaKnown RBP3.62□□□□□ -1.83
VPS27YNR006W CIN8P27895 1000 aa3.62□□□□□ -1.83
VPS27YNR006W BMH2P34730 273 aaKnown RBP3.62□□□□□ -1.83
VPS27YNR006W TCD1P38756 429 aa3.62□□□□□ -1.83
VPS27YNR006W OTU1P43558 301 aa3.62□□□□□ -1.83
VPS27YNR006W BNA6P43619 295 aa3.62□□□□□ -1.83
VPS27YNR006W ORC5P50874 479 aa3.62□□□□□ -1.83
VPS27YNR006W SOL4P53315 255 aa3.62□□□□□ -1.83
VPS27YNR006W GPI15P53961 229 aa3.62□□□□□ -1.83
VPS27YNR006W RHO4Q00246 291 aa3.62□□□□□ -1.83
VPS27YNR006W YPL068CQ02749 293 aa3.62□□□□□ -1.83
VPS27YNR006W MMT1Q03218 510 aa3.62□□□□□ -1.83
VPS27YNR006W MRPS17Q03246 237 aaPredicted RBP3.62□□□□□ -1.83
VPS27YNR006W BSC6Q08280 497 aa3.62□□□□□ -1.83
VPS27YNR006W DNL4Q08387 944 aaPredicted RBP3.62□□□□□ -1.83
VPS27YNR006W ATG34Q12292 412 aa3.62□□□□□ -1.83
VPS27YNR006W FRE7Q12333 620 aa3.62□□□□□ -1.83
VPS27YNR006W ARG4P04076 463 aaPredicted RBP3.62□□□□□ -1.83
VPS27YNR006W CDC36P06100 191 aaPredicted RBP3.62□□□□□ -1.83
VPS27YNR006W YLL053CP0CD98 152 aa3.62□□□□□ -1.83
VPS27YNR006W RNA1P11745 407 aaKnown RBP3.62□□□□□ -1.83
VPS27YNR006W CKI1P20485 582 aa3.62□□□□□ -1.83
VPS27YNR006W GPI12P23797 304 aa3.62□□□□□ -1.83
VPS27YNR006W DEG1P31115 442 aaKnown RBP3.62□□□□□ -1.83
VPS27YNR006W MSS51P32335 436 aa3.62□□□□□ -1.83
VPS27YNR006W RME1P32338 300 aaKnown RBP3.62□□□□□ -1.83
VPS27YNR006W APE2P32454 952 aaKnown RBP3.62□□□□□ -1.83
VPS27YNR006W ZUO1P32527 433 aaKnown RBP3.62□□□□□ -1.83
VPS27YNR006W TOA2P32774 122 aa3.62□□□□□ -1.83
VPS27YNR006W YKL162CP36052 402 aa3.62□□□□□ -1.83
VPS27YNR006W ARN1P38731 627 aa3.62□□□□□ -1.83
VPS27YNR006W FAU1P40099 211 aa3.62□□□□□ -1.83
VPS27YNR006W YJL118WP47022 219 aa3.62□□□□□ -1.83
VPS27YNR006W MPS1P54199 764 aa3.62□□□□□ -1.83
VPS27YNR006W FMP30Q02883 468 aa3.62□□□□□ -1.83
VPS27YNR006W YMR034CQ05131 434 aaPredicted RBP3.62□□□□□ -1.83
VPS27YNR006W ATG31Q12421 196 aa3.62□□□□□ -1.83
VPS27YNR006W FRS2P15625 503 aaKnown RBP3.61□□□□□ -1.83
VPS27YNR006W CDC23P16522 626 aa3.61□□□□□ -1.83
VPS27YNR006W CWP1P28319 239 aa3.61□□□□□ -1.83
VPS27YNR006W YMC1P32331 307 aa3.61□□□□□ -1.83
VPS27YNR006W UTR4P32626 227 aa3.61□□□□□ -1.83
VPS27YNR006W SKN1P33336 771 aa3.61□□□□□ -1.83
VPS27YNR006W PRM9P39551 298 aa3.61□□□□□ -1.83
VPS27YNR006W YEL020CP39994 560 aa3.61□□□□□ -1.83
VPS27YNR006W YMR134WP40207 237 aa3.61□□□□□ -1.83
VPS27YNR006W FMC1P40491 155 aa3.61□□□□□ -1.83
VPS27YNR006W YAR1P46683 200 aa3.61□□□□□ -1.83
VPS27YNR006W CGR1P53188 120 aa3.61□□□□□ -1.83
VPS27YNR006W DSL1P53847 754 aa3.61□□□□□ -1.83
VPS27YNR006W MRP51Q02950 344 aa3.61□□□□□ -1.83
VPS27YNR006W SNZ1Q03148 297 aa3.61□□□□□ -1.83
VPS27YNR006W SMP3Q04174 516 aa3.61□□□□□ -1.83
VPS27YNR006W SSQ1Q05931 657 aaPredicted RBP3.61□□□□□ -1.83
VPS27YNR006W GLE1Q12315 538 aa3.61□□□□□ -1.83
VPS27YNR006W PRP46Q12417 451 aaPredicted RBP3.61□□□□□ -1.83
VPS27YNR006W AHC1Q12433 566 aa3.61□□□□□ -1.83
VPS27YNR006W TDH3P00359 332 aaKnown RBP RIP-Chip data3.6□□□□□ -1.83not detected
VPS27YNR006W COX2P00410 251 aa3.6□□□□□ -1.83
VPS27YNR006W HEM1P09950 548 aaPredicted RBP3.6□□□□□ -1.83
VPS27YNR006W SAT4P25333 603 aaKnown RBP3.6□□□□□ -1.83
VPS27YNR006W RVS161P25343 265 aaKnown RBP3.6□□□□□ -1.83
VPS27YNR006W MXR2P25566 168 aa3.6□□□□□ -1.83
VPS27YNR006W CBP4P37267 147 aa3.6□□□□□ -1.83
VPS27YNR006W LEU5P38702 357 aa3.6□□□□□ -1.83
VPS27YNR006W DSE1P40077 573 aa3.6□□□□□ -1.83
VPS27YNR006W UTP25P40498 721 aaKnown RBP3.6□□□□□ -1.83
VPS27YNR006W YJL043WP47053 257 aa3.6□□□□□ -1.83
VPS27YNR006W RSN1Q03516 953 aa3.6□□□□□ -1.83
VPS27YNR006W COQ11Q05892 277 aa3.6□□□□□ -1.83
VPS27YNR006W DIC1Q06143 298 aa3.6□□□□□ -1.83
VPS27YNR006W TSR1Q07381 788 aaKnown RBP3.6□□□□□ -1.83
VPS27YNR006W YDL218WQ07629 317 aa3.6□□□□□ -1.83
VPS27YNR006W YLL056CQ12177 298 aa3.6□□□□□ -1.83
VPS27YNR006W SLM5P25345 492 aaKnown RBP3.6□□□□□ -1.83
VPS27YNR006W BUB3P26449 341 aa3.6□□□□□ -1.83
VPS27YNR006W EFB1P32471 206 aaKnown RBP3.6□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 193.9 ms