RNA–Protein interactions for RNA: YNL088W

TOP2, Transcript of Topoisomerase II, yeast

Gene TOP2, Length 4,287 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TOP2	YNL088W	YKL151C	P36059	337 aa		2.39	□□□□□ -2.03
TOP2	YNL088W	DRE2	P36152	348 aa		2.39	□□□□□ -2.03
TOP2	YNL088W	TSC10	P38342	320 aa		2.39	□□□□□ -2.03
TOP2	YNL088W	PTC7	P38797	343 aa		2.39	□□□□□ -2.03
TOP2	YNL088W	PLB1	P39105	664 aa		2.39	□□□□□ -2.03
TOP2	YNL088W	FKH1	P40466	484 aa		2.39	□□□□□ -2.03
TOP2	YNL088W	ASN2	P49090	572 aa	Known RBP	2.39	□□□□□ -2.03
TOP2	YNL088W	YGL036W	P53185	909 aa	Predicted RBP	2.39	□□□□□ -2.03
TOP2	YNL088W	BUD9	P53226	547 aa		2.39	□□□□□ -2.03
TOP2	YNL088W	YNL140C	P53910	189 aa		2.39	□□□□□ -2.03
TOP2	YNL088W	MFM1	Q02783	413 aa		2.39	□□□□□ -2.03
TOP2	YNL088W	YMR310C	Q04867	317 aa	Predicted RBP	2.39	□□□□□ -2.03
TOP2	YNL088W	PEX10	Q05568	337 aa		2.39	□□□□□ -2.03
TOP2	YNL088W	ADY4	Q05955	493 aa		2.39	□□□□□ -2.03
TOP2	YNL088W	YPR091C	Q06833	770 aa		2.39	□□□□□ -2.03
TOP2	YNL088W	STP4	Q07351	490 aa		2.39	□□□□□ -2.03
TOP2	YNL088W	COS7	Q07788	383 aa		2.39	□□□□□ -2.03
TOP2	YNL088W	YLR036C	Q07986	203 aa		2.39	□□□□□ -2.03
TOP2	YNL088W	WTM1	Q12363	437 aa	Known RBP	2.39	□□□□□ -2.03
TOP2	YNL088W	RPS28A	Q3E7X9	67 aa	Predicted RBP	2.39	□□□□□ -2.03
TOP2	YNL088W	CAR1	P00812	333 aa	Known RBP	2.39	□□□□□ -2.03
TOP2	YNL088W	PUT1	P09368	476 aa		2.39	□□□□□ -2.03
TOP2	YNL088W	POX1	P13711	748 aa		2.39	□□□□□ -2.03
TOP2	YNL088W	GPI12	P23797	304 aa		2.39	□□□□□ -2.03
TOP2	YNL088W	RAD57	P25301	460 aa		2.39	□□□□□ -2.03
TOP2	YNL088W	DEG1	P31115	442 aa	Known RBP	2.39	□□□□□ -2.03
TOP2	YNL088W	MSS51	P32335	436 aa		2.39	□□□□□ -2.03
TOP2	YNL088W	RAD5	P32849	1169 aa	Predicted RBP	2.39	□□□□□ -2.03
TOP2	YNL088W	TAF14	P35189	244 aa		2.39	□□□□□ -2.03
TOP2	YNL088W	YKR078W	P36158	585 aa	Known RBP	2.39	□□□□□ -2.03
TOP2	YNL088W	RRP3	P38712	501 aa	Known RBP	2.39	□□□□□ -2.03
TOP2	YNL088W	BDH1	P39714	382 aa		2.39	□□□□□ -2.03
TOP2	YNL088W	IMD4	P50094	524 aa	Known RBP	2.39	□□□□□ -2.03
TOP2	YNL088W	TAM41	P53230	385 aa		2.39	□□□□□ -2.03
TOP2	YNL088W	REC102	Q02721	264 aa		2.39	□□□□□ -2.03
TOP2	YNL088W	YPL108W	Q02872	168 aa	Predicted RBP	2.39	□□□□□ -2.03
TOP2	YNL088W	YPR196W	Q06595	470 aa		2.39	□□□□□ -2.03
TOP2	YNL088W	GAS5	Q08193	484 aa		2.39	□□□□□ -2.03
TOP2	YNL088W	SPO24	Q3E752	67 aa		2.39	□□□□□ -2.03
TOP2	YNL088W	CDC8	P00572	216 aa		2.39	□□□□□ -2.03
TOP2	YNL088W	PMR1	P13586	950 aa		2.39	□□□□□ -2.03
TOP2	YNL088W	SAC7	P17121	654 aa		2.39	□□□□□ -2.03
TOP2	YNL088W	NAR1	P23503	491 aa	Known RBP	2.39	□□□□□ -2.03
TOP2	YNL088W	ECM25	P32525	599 aa		2.39	□□□□□ -2.03
TOP2	YNL088W	PRS4	P38063	326 aa	Predicted RBP	2.39	□□□□□ -2.03
TOP2	YNL088W	PTC4	P38089	393 aa		2.39	□□□□□ -2.03
TOP2	YNL088W	HEK2	P38199	381 aa	Known RBP RIP-Chip data	2.39	□□□□□ -2.03	not detected
TOP2	YNL088W	VHS2	P40463	436 aa		2.39	□□□□□ -2.03
TOP2	YNL088W	OPT1	P40897	799 aa		2.39	□□□□□ -2.03
TOP2	YNL088W	RPN11	P43588	306 aa	Known RBP	2.39	□□□□□ -2.03
TOP2	YNL088W	YJR054W	P47114	497 aa		2.39	□□□□□ -2.03
TOP2	YNL088W	YGL108C	P53139	140 aa		2.39	□□□□□ -2.03
TOP2	YNL088W	LEE1	Q02799	301 aa	Known RBP	2.39	□□□□□ -2.03
TOP2	YNL088W	SNO1	Q03144	224 aa		2.39	□□□□□ -2.03
TOP2	YNL088W	IZH1	Q03419	316 aa		2.39	□□□□□ -2.03
TOP2	YNL088W	RIM13	Q03792	727 aa		2.39	□□□□□ -2.03
TOP2	YNL088W	HED1	Q03937	162 aa		2.39	□□□□□ -2.03
TOP2	YNL088W	HCR1	Q05775	265 aa	Known RBP	2.39	□□□□□ -2.03
TOP2	YNL088W	DIA2	Q08496	732 aa	Predicted RBP	2.39	□□□□□ -2.03
TOP2	YNL088W	GLO4	Q12320	285 aa		2.39	□□□□□ -2.03
TOP2	YNL088W	RRD2	Q12461	358 aa		2.39	□□□□□ -2.03
TOP2	YNL088W	YBL029C-A	Q3E756	94 aa		2.39	□□□□□ -2.03
TOP2	YNL088W	YKL183C-A	Q3E765	70 aa		2.39	□□□□□ -2.03
TOP2	YNL088W	COQ4	O13525	335 aa		2.39	□□□□□ -2.03
TOP2	YNL088W	PET54	P10834	293 aa		2.39	□□□□□ -2.03
TOP2	YNL088W	MRP13	P12686	339 aa		2.39	□□□□□ -2.03
TOP2	YNL088W	YMR31	P19955	123 aa		2.39	□□□□□ -2.03
TOP2	YNL088W	RRT12	P25381	491 aa		2.39	□□□□□ -2.03
TOP2	YNL088W	PMI40	P29952	429 aa	Known RBP	2.39	□□□□□ -2.03
TOP2	YNL088W	YBL010C	P32788	280 aa		2.39	□□□□□ -2.03
TOP2	YNL088W	UPS2	P35200	230 aa		2.39	□□□□□ -2.03
TOP2	YNL088W	TFA2	P36145	328 aa		2.39	□□□□□ -2.03
TOP2	YNL088W	YPK3	P38070	525 aa		2.39	□□□□□ -2.03
TOP2	YNL088W	UBA4	P38820	440 aa		2.39	□□□□□ -2.03
TOP2	YNL088W	YJL206C	P39529	758 aa		2.39	□□□□□ -2.03
TOP2	YNL088W	DLD3	P39976	496 aa	Known RBP	2.39	□□□□□ -2.03
TOP2	YNL088W	GIP2	P40036	548 aa		2.39	□□□□□ -2.03
TOP2	YNL088W	SYG1	P40528	902 aa		2.39	□□□□□ -2.03
TOP2	YNL088W	GTS1	P40956	396 aa		2.39	□□□□□ -2.03
TOP2	YNL088W	SCD6	P45978	349 aa	Known RBP RIP-Chip data	2.39	□□□□□ -2.03	not detected
TOP2	YNL088W	MRX5	P47007	382 aa		2.39	□□□□□ -2.03
TOP2	YNL088W	EFM6	P53970	246 aa		2.39	□□□□□ -2.03
TOP2	YNL088W	TPO1	Q07824	586 aa		2.39	□□□□□ -2.03
TOP2	YNL088W	TMS1	Q12116	473 aa		2.39	□□□□□ -2.03
TOP2	YNL088W	YBR085C-A	O43137	85 aa		2.38	□□□□□ -2.03
TOP2	YNL088W	RPL18A	P0CX49	186 aa	Known RBP	2.38	□□□□□ -2.03
TOP2	YNL088W	RPL18B	P0CX50	186 aa	Known RBP	2.38	□□□□□ -2.03
TOP2	YNL088W	MAS2	P11914	482 aa		2.38	□□□□□ -2.03
TOP2	YNL088W	DAL82	P21705	255 aa		2.38	□□□□□ -2.03
TOP2	YNL088W	PTC6	P25646	442 aa		2.38	□□□□□ -2.03
TOP2	YNL088W	ITR2	P30606	609 aa		2.38	□□□□□ -2.03
TOP2	YNL088W	TMT1	P32643	299 aa		2.38	□□□□□ -2.03
TOP2	YNL088W	SUI1	P32911	108 aa	Known RBP	2.38	□□□□□ -2.03
TOP2	YNL088W	RTC2	P38279	296 aa		2.38	□□□□□ -2.03
TOP2	YNL088W	SBE22	P38814	852 aa		2.38	□□□□□ -2.03
TOP2	YNL088W	CCT4	P39078	528 aa	Known RBP	2.38	□□□□□ -2.03
TOP2	YNL088W	YER130C	P39959	443 aa		2.38	□□□□□ -2.03
TOP2	YNL088W	ECM10	P39987	644 aa		2.38	□□□□□ -2.03
TOP2	YNL088W	BUR6	P40096	142 aa		2.38	□□□□□ -2.03
TOP2	YNL088W	SET4	P42948	560 aa		2.38	□□□□□ -2.03

Retrieved 100 of 5,963 RNA–protein pairs in 41.3 ms