RNA–Protein interactions for RNA: YNL078W

NIS1, Transcript of Protein localized in the bud neck at G2/M phase, yeast

Gene NIS1, Length 1,224 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NIS1	YNL078W	DAP2	P18962	818 aa		3.76	□□□□□ -1.81
NIS1	YNL078W	ERG8	P24521	451 aa		3.76	□□□□□ -1.81
NIS1	YNL078W	SRB5	P32585	307 aa		3.76	□□□□□ -1.81
NIS1	YNL078W	SSE2	P32590	693 aa	Known RBP	3.76	□□□□□ -1.81
NIS1	YNL078W	SLC1	P33333	303 aa		3.76	□□□□□ -1.81
NIS1	YNL078W	TAF14	P35189	244 aa		3.76	□□□□□ -1.81
NIS1	YNL078W	ATP3	P38077	311 aa	Known RBP	3.76	□□□□□ -1.81
NIS1	YNL078W	RFS1	P38234	210 aa	Known RBP	3.76	□□□□□ -1.81
NIS1	YNL078W	YBR225W	P38321	900 aa		3.76	□□□□□ -1.81
NIS1	YNL078W	SLX1	P38324	304 aa		3.76	□□□□□ -1.81
NIS1	YNL078W	PCA1	P38360	1216 aa		3.76	□□□□□ -1.81
NIS1	YNL078W	YHI9	P38765	294 aa		3.76	□□□□□ -1.81
NIS1	YNL078W	EGD2	P38879	174 aa	Known RBP	3.76	□□□□□ -1.81
NIS1	YNL078W	SEC31	P38968	1273 aa	Known RBP	3.76	□□□□□ -1.81
NIS1	YNL078W	UME6	P39001	836 aa		3.76	□□□□□ -1.81
NIS1	YNL078W	MNN9	P39107	395 aa	Known RBP	3.76	□□□□□ -1.81
NIS1	YNL078W	YER137C	P40083	148 aa	Known RBP	3.76	□□□□□ -1.81
NIS1	YNL078W	JLP2	P40206	208 aa		3.76	□□□□□ -1.81
NIS1	YNL078W	IST3	P40565	148 aa	Predicted RBP	3.76	□□□□□ -1.81
NIS1	YNL078W	GUF1	P46943	645 aa		3.76	□□□□□ -1.81
NIS1	YNL078W	EFM3	P47163	339 aa		3.76	□□□□□ -1.81
NIS1	YNL078W	COS5	P47187	383 aa		3.76	□□□□□ -1.81
NIS1	YNL078W	MPS2	P53159	387 aa		3.76	□□□□□ -1.81
NIS1	YNL078W	YGL036W	P53185	909 aa	Predicted RBP	3.76	□□□□□ -1.81
NIS1	YNL078W	DID2	P69771	204 aa		3.76	□□□□□ -1.81
NIS1	YNL078W	REG1	Q00816	1014 aa		3.76	□□□□□ -1.81
NIS1	YNL078W	YMR209C	Q03648	457 aa		3.76	□□□□□ -1.81
NIS1	YNL078W	RRP17	Q04031	235 aa	Predicted RBP	3.76	□□□□□ -1.81
NIS1	YNL078W	PRM6	Q04705	352 aa		3.76	□□□□□ -1.81
NIS1	YNL078W	RQC1	Q05468	723 aa	Known RBP	3.76	□□□□□ -1.81
NIS1	YNL078W	RTR2	Q12378	196 aa		3.76	□□□□□ -1.81
NIS1	YNL078W	BI3	Q9ZZW7	517 aa		3.76	□□□□□ -1.81
NIS1	YNL078W	ATP6	P00854	259 aa		3.75	□□□□□ -1.81
NIS1	YNL078W	GAL3	P13045	520 aa		3.75	□□□□□ -1.81
NIS1	YNL078W	KGD1	P20967	1014 aa	Known RBP	3.75	□□□□□ -1.81
NIS1	YNL078W	DBF2	P22204	572 aa		3.75	□□□□□ -1.81
NIS1	YNL078W	HXT2	P23585	541 aa		3.75	□□□□□ -1.81
NIS1	YNL078W	CYM1	P32898	989 aa		3.75	□□□□□ -1.81
NIS1	YNL078W	YKL063C	P35725	167 aa		3.75	□□□□□ -1.81
NIS1	YNL078W	UBP11	P36026	717 aa		3.75	□□□□□ -1.81
NIS1	YNL078W	SKG1	P36169	355 aa		3.75	□□□□□ -1.81
NIS1	YNL078W	NAT2	P37293	288 aa		3.75	□□□□□ -1.81
NIS1	YNL078W	LEU5	P38702	357 aa		3.75	□□□□□ -1.81
NIS1	YNL078W	YHR045W	P38775	560 aa		3.75	□□□□□ -1.81
NIS1	YNL078W	YER186C	P40101	306 aa		3.75	□□□□□ -1.81
NIS1	YNL078W	YIL054W	P40524	105 aa		3.75	□□□□□ -1.81
NIS1	YNL078W	ARC1	P46672	376 aa	Known RBP	3.75	□□□□□ -1.81
NIS1	YNL078W	PHO86	P46956	311 aa		3.75	□□□□□ -1.81
NIS1	YNL078W	LYS20	P48570	428 aa	Known RBP	3.75	□□□□□ -1.81
NIS1	YNL078W	ARO8	P53090	500 aa	Known RBP	3.75	□□□□□ -1.81
NIS1	YNL078W	GPI1	P53306	609 aa		3.75	□□□□□ -1.81
NIS1	YNL078W	RCF2	P53721	224 aa		3.75	□□□□□ -1.81
NIS1	YNL078W	MRPL50	P53724	139 aa		3.75	□□□□□ -1.81
NIS1	YNL078W	IMP4	P53941	290 aa	Known RBP	3.75	□□□□□ -1.81
NIS1	YNL078W	ARK1	P53974	638 aa		3.75	□□□□□ -1.81
NIS1	YNL078W	TIM8	P57744	87 aa		3.75	□□□□□ -1.81
NIS1	YNL078W	RPA49	Q01080	415 aa	Predicted RBP	3.75	□□□□□ -1.81
NIS1	YNL078W	MRPL1	Q04599	285 aa		3.75	□□□□□ -1.81
NIS1	YNL078W	RCO1	Q04779	684 aa		3.75	□□□□□ -1.81
NIS1	YNL078W	DTD1	Q07648	150 aa	Known RBP	3.75	□□□□□ -1.81
NIS1	YNL078W	SAM4	Q08985	325 aa	Known RBP	3.75	□□□□□ -1.81
NIS1	YNL078W	YOR289W	Q12012	251 aa	Predicted RBP	3.75	□□□□□ -1.81
NIS1	YNL078W	YLR112W	Q12130	139 aa		3.75	□□□□□ -1.81
NIS1	YNL078W	HUA2	Q12134	243 aa		3.75	□□□□□ -1.81
NIS1	YNL078W	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	3.75	□□□□□ -1.81	not detected
NIS1	YNL078W	ATG31	Q12421	196 aa		3.75	□□□□□ -1.81
NIS1	YNL078W	AVL9	Q12500	764 aa		3.75	□□□□□ -1.81
NIS1	YNL078W	MED11	Q99278	115 aa		3.75	□□□□□ -1.81
NIS1	YNL078W	RIF1	P29539	1916 aa		3.75	□□□□□ -1.81
NIS1	YNL078W	FLO1	P32768	1537 aa		3.75	□□□□□ -1.81
NIS1	YNL078W	UBR1	P19812	1950 aa		3.74	□□□□□ -1.81
NIS1	YNL078W	IPP1	P00817	287 aa	Known RBP	3.74	□□□□□ -1.81
NIS1	YNL078W	ILV1	P00927	576 aa	Known RBP	3.74	□□□□□ -1.81
NIS1	YNL078W	SNF3	P10870	884 aa		3.74	□□□□□ -1.81
NIS1	YNL078W	FBA1	P14540	359 aa	Known RBP	3.74	□□□□□ -1.81
NIS1	YNL078W	GUK1	P15454	187 aa	Known RBP	3.74	□□□□□ -1.81
NIS1	YNL078W	UGA1	P17649	471 aa		3.74	□□□□□ -1.81
NIS1	YNL078W	SAR1	P20606	190 aa	Known RBP	3.74	□□□□□ -1.81
NIS1	YNL078W	DAL2	P25335	343 aa		3.74	□□□□□ -1.81
NIS1	YNL078W	OCA4	P25366	362 aa		3.74	□□□□□ -1.81
NIS1	YNL078W	CHA1	P25379	360 aa	Known RBP	3.74	□□□□□ -1.81
NIS1	YNL078W	RGT1	P32862	1170 aa		3.74	□□□□□ -1.81
NIS1	YNL078W	SSO1	P32867	290 aa		3.74	□□□□□ -1.81
NIS1	YNL078W	SRB2	P34162	210 aa		3.74	□□□□□ -1.81
NIS1	YNL078W	PTC1	P35182	281 aa		3.74	□□□□□ -1.81
NIS1	YNL078W	STP2	P38704	541 aa		3.74	□□□□□ -1.81
NIS1	YNL078W	YHK8	P38776	514 aa		3.74	□□□□□ -1.81
NIS1	YNL078W	BZZ1	P38822	633 aa		3.74	□□□□□ -1.81
NIS1	YNL078W	AXL2	P38928	823 aa		3.74	□□□□□ -1.81
NIS1	YNL078W	MTW1	P39731	289 aa		3.74	□□□□□ -1.81
NIS1	YNL078W	AVT2	P39981	480 aa		3.74	□□□□□ -1.81
NIS1	YNL078W	YER010C	P40011	234 aa		3.74	□□□□□ -1.81
NIS1	YNL078W	YKE4	P40544	346 aa		3.74	□□□□□ -1.81
NIS1	YNL078W	RPN11	P43588	306 aa	Known RBP	3.74	□□□□□ -1.81
NIS1	YNL078W	GLG2	P47011	380 aa		3.74	□□□□□ -1.81
NIS1	YNL078W	MDV1	P47025	714 aa		3.74	□□□□□ -1.81
NIS1	YNL078W	APS3	P47064	194 aa		3.74	□□□□□ -1.81
NIS1	YNL078W	HOC1	P47124	396 aa		3.74	□□□□□ -1.81
NIS1	YNL078W	LYS4	P49367	693 aa	Predicted RBP	3.74	□□□□□ -1.81
NIS1	YNL078W	FMP48	P53233	369 aa		3.74	□□□□□ -1.81

Retrieved 100 of 5,963 RNA–protein pairs in 175.6 ms