RNA–Protein interactions for RNA: YMR304W

UBP15, Transcript of Ubiquitin-specific protease involved in protein deubiquitination, yeastyeast

Gene UBP15, Length 3,693 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP15YMR304W TY1A-ER1P0CX71 440 aa2.31□□□□□ -2.04
UBP15YMR304W TY1A-LR2P0CX72 440 aa2.31□□□□□ -2.04
UBP15YMR304W TY1A-PLP0CX73 440 aa2.31□□□□□ -2.04
UBP15YMR304W TY1A-JR1P0CX74 440 aa2.31□□□□□ -2.04
UBP15YMR304W TY1A-LR3P0CX75 440 aa2.31□□□□□ -2.04
UBP15YMR304W TY1A-ML2P0CX76 440 aa2.31□□□□□ -2.04
UBP15YMR304W MAS1P10507 462 aa2.31□□□□□ -2.04
UBP15YMR304W PRE9P23638 258 aaKnown RBP2.31□□□□□ -2.04
UBP15YMR304W HRR25P29295 494 aaKnown RBP2.31□□□□□ -2.04
UBP15YMR304W SAC1P32368 623 aaKnown RBP2.31□□□□□ -2.04
UBP15YMR304W ETR1P38071 380 aa2.31□□□□□ -2.04
UBP15YMR304W PBP2P38151 413 aaKnown RBP RIP-Chip data2.31□□□□□ -2.04not detected
UBP15YMR304W ATG12P38316 186 aa2.31□□□□□ -2.04
UBP15YMR304W POP4P38336 279 aa2.31□□□□□ -2.04
UBP15YMR304W GDI1P39958 451 aaKnown RBP2.31□□□□□ -2.04
UBP15YMR304W NOP16P40007 231 aaKnown RBP2.31□□□□□ -2.04
UBP15YMR304W SEC24P40482 926 aaKnown RBP2.31□□□□□ -2.04
UBP15YMR304W AGP3P43548 558 aa2.31□□□□□ -2.04
UBP15YMR304W IRC5P43610 853 aa2.31□□□□□ -2.04
UBP15YMR304W YJR124CP47159 448 aa2.31□□□□□ -2.04
UBP15YMR304W FLC3P53121 802 aa2.31□□□□□ -2.04
UBP15YMR304W EEB1Q02891 456 aa2.31□□□□□ -2.04
UBP15YMR304W URC2Q04411 772 aa2.31□□□□□ -2.04
UBP15YMR304W VBA4Q04602 768 aaKnown RBP2.31□□□□□ -2.04
UBP15YMR304W NKP2Q06162 153 aa2.31□□□□□ -2.04
UBP15YMR304W TFC6Q06339 672 aa2.31□□□□□ -2.04
UBP15YMR304W YDR056CQ12025 205 aa2.31□□□□□ -2.04
UBP15YMR304W TY1A-GR1Q12085 440 aa2.31□□□□□ -2.04
UBP15YMR304W TY1A-PR3Q6Q5H1 440 aaKnown RBP2.31□□□□□ -2.04
UBP15YMR304W TY1A-OLQ92392 440 aaKnown RBP2.31□□□□□ -2.04
UBP15YMR304W FRT1Q99332 602 aa2.31□□□□□ -2.04
UBP15YMR304W HEM3P28789 327 aa2.31□□□□□ -2.04
UBP15YMR304W PRP21P32524 280 aaPredicted RBP2.31□□□□□ -2.04
UBP15YMR304W UGA4P32837 571 aa2.31□□□□□ -2.04
UBP15YMR304W MCH2P36032 473 aa2.31□□□□□ -2.04
UBP15YMR304W NTR2P36118 322 aaPredicted RBP2.31□□□□□ -2.04
UBP15YMR304W BET3P36149 193 aa2.31□□□□□ -2.04
UBP15YMR304W QDR3P38227 689 aa2.31□□□□□ -2.04
UBP15YMR304W NUP82P40368 713 aa2.31□□□□□ -2.04
UBP15YMR304W IME4P41833 600 aa2.31□□□□□ -2.04
UBP15YMR304W YJR111CP47148 283 aaKnown RBP2.31□□□□□ -2.04
UBP15YMR304W GTO1P48239 356 aa2.31□□□□□ -2.04
UBP15YMR304W ASN2P49090 572 aaKnown RBP2.31□□□□□ -2.04
UBP15YMR304W HSH155P49955 971 aaKnown RBP2.31□□□□□ -2.04
UBP15YMR304W MNN10P50108 393 aaKnown RBP2.31□□□□□ -2.04
UBP15YMR304W CUE3P53137 624 aaKnown RBP2.31□□□□□ -2.04
UBP15YMR304W BUD32P53323 261 aa2.31□□□□□ -2.04
UBP15YMR304W STD1Q02794 444 aa2.31□□□□□ -2.04
UBP15YMR304W YMR210WQ03649 449 aa2.31□□□□□ -2.04
UBP15YMR304W MTQ2Q03920 221 aaPredicted RBP2.31□□□□□ -2.04
UBP15YMR304W UTP14Q04500 899 aaKnown RBP2.31□□□□□ -2.04
UBP15YMR304W FAR10Q06001 478 aa2.31□□□□□ -2.04
UBP15YMR304W NGL1Q08213 363 aaKnown RBP2.31□□□□□ -2.04
UBP15YMR304W YOR378WQ08902 515 aa2.31□□□□□ -2.04
UBP15YMR304W TDH2P00358 332 aaKnown RBP2.31□□□□□ -2.04
UBP15YMR304W TDH3P00359 332 aaKnown RBP RIP-Chip data2.31□□□□□ -2.04not detected
UBP15YMR304W RNR2P09938 399 aaKnown RBP2.31□□□□□ -2.04
UBP15YMR304W EXO70P19658 623 aa2.31□□□□□ -2.04
UBP15YMR304W PRP4P20053 465 aaKnown RBP2.31□□□□□ -2.04
UBP15YMR304W CAD1P24813 409 aaKnown RBP2.31□□□□□ -2.04
UBP15YMR304W YCL049CP25577 312 aa2.31□□□□□ -2.04
UBP15YMR304W ATG15P25641 520 aa2.31□□□□□ -2.04
UBP15YMR304W BEM3P32873 1128 aa2.31□□□□□ -2.04
UBP15YMR304W MDL2P33311 773 aa2.31□□□□□ -2.04
UBP15YMR304W TPO5P36029 618 aa2.31□□□□□ -2.04
UBP15YMR304W ADE17P38009 592 aaKnown RBP2.31□□□□□ -2.04
UBP15YMR304W RRN10P38204 145 aa2.31□□□□□ -2.04
UBP15YMR304W REG2P38232 338 aa2.31□□□□□ -2.04
UBP15YMR304W GRE3P38715 327 aaKnown RBP RIP-Chip data2.31□□□□□ -2.04not detected
UBP15YMR304W MNL1P38888 796 aa2.31□□□□□ -2.04
UBP15YMR304W VPS45P38932 577 aa2.31□□□□□ -2.04
UBP15YMR304W MAL11P53048 616 aa2.31□□□□□ -2.04
UBP15YMR304W GTF1P53260 183 aaPredicted RBP2.31□□□□□ -2.04
UBP15YMR304W SSU72P53538 206 aaPredicted RBP2.31□□□□□ -2.04
UBP15YMR304W KTR6P54070 446 aa2.31□□□□□ -2.04
UBP15YMR304W UTP6Q02354 440 aaKnown RBP2.31□□□□□ -2.04
UBP15YMR304W SLD7Q08457 257 aa2.31□□□□□ -2.04
UBP15YMR304W FRE3Q08905 711 aa2.31□□□□□ -2.04
UBP15YMR304W SNF8Q12483 233 aa2.31□□□□□ -2.04
UBP15YMR304W NCB2Q92317 146 aa2.31□□□□□ -2.04
UBP15YMR304W PET20Q99373 253 aa2.31□□□□□ -2.04
UBP15YMR304W CYC7P00045 113 aa2.3□□□□□ -2.04
UBP15YMR304W PRC1P00729 532 aa2.3□□□□□ -2.04
UBP15YMR304W YPR170W-BP0C5R9 85 aa2.3□□□□□ -2.04
UBP15YMR304W SPO16P17122 198 aa2.3□□□□□ -2.04
UBP15YMR304W ERS1P17261 260 aa2.3□□□□□ -2.04
UBP15YMR304W MET16P18408 261 aaPredicted RBP2.3□□□□□ -2.04
UBP15YMR304W SEC59P20048 519 aa2.3□□□□□ -2.04
UBP15YMR304W SAN1P22470 610 aa2.3□□□□□ -2.04
UBP15YMR304W FUN30P31380 1131 aa2.3□□□□□ -2.04
UBP15YMR304W NDC1P32500 655 aa2.3□□□□□ -2.04
UBP15YMR304W YKR073CP36153 106 aa2.3□□□□□ -2.04
UBP15YMR304W YBR284WP38150 797 aa2.3□□□□□ -2.04
UBP15YMR304W MUP3P38734 546 aa2.3□□□□□ -2.04
UBP15YMR304W YHR097CP38809 366 aaKnown RBP2.3□□□□□ -2.04
UBP15YMR304W SRP14P38985 146 aa2.3□□□□□ -2.04
UBP15YMR304W PMT5P52867 743 aa2.3□□□□□ -2.04
UBP15YMR304W MPP6P53725 186 aaPredicted RBP2.3□□□□□ -2.04
UBP15YMR304W YNR062CP53748 327 aa2.3□□□□□ -2.04
UBP15YMR304W UFD2P54860 961 aa2.3□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 14.2 ms