RNA–Protein interactions for RNA: YKL088W

CAB3, Transcript of Subunit of PPCDC and CoA-SPC complexes involved in CoA biosynthesis, yeast

Gene CAB3, Length 1,716 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CAB3	YKL088W	YDR109C	Q04585	715 aa		4.58	□□□□□ -1.68
CAB3	YKL088W	DFG16	Q99234	619 aa		4.58	□□□□□ -1.68
CAB3	YKL088W	STE2	D6VTK4	431 aa		4.58	□□□□□ -1.68
CAB3	YKL088W	YPK1	P12688	680 aa	Known RBP	4.58	□□□□□ -1.68
CAB3	YKL088W	CAD1	P24813	409 aa	Known RBP	4.58	□□□□□ -1.68
CAB3	YKL088W	RPC19	P28000	142 aa	Known RBP	4.58	□□□□□ -1.68
CAB3	YKL088W	HMX1	P32339	317 aa		4.58	□□□□□ -1.68
CAB3	YKL088W	SSO1	P32867	290 aa		4.58	□□□□□ -1.68
CAB3	YKL088W	HES1	P35843	434 aa		4.58	□□□□□ -1.68
CAB3	YKL088W	ELF1	P36053	145 aa		4.58	□□□□□ -1.68
CAB3	YKL088W	MAK5	P38112	773 aa	Predicted RBP	4.58	□□□□□ -1.68
CAB3	YKL088W	RFC3	P38629	340 aa		4.58	□□□□□ -1.68
CAB3	YKL088W	UIP3	P39547	235 aa		4.58	□□□□□ -1.68
CAB3	YKL088W	DSE1	P40077	573 aa		4.58	□□□□□ -1.68
CAB3	YKL088W	STB4	P50104	949 aa		4.58	□□□□□ -1.68
CAB3	YKL088W	BET4	Q00618	327 aa		4.58	□□□□□ -1.68
CAB3	YKL088W	YLL056C	Q12177	298 aa		4.58	□□□□□ -1.68
CAB3	YKL088W	INP53	Q12271	1107 aa		4.58	□□□□□ -1.68
CAB3	YKL088W	SCH9	P11792	824 aa	Known RBP	4.57	□□□□□ -1.68
CAB3	YKL088W	KSS1	P14681	368 aa		4.57	□□□□□ -1.68
CAB3	YKL088W	FRE1	P32791	686 aa		4.57	□□□□□ -1.68
CAB3	YKL088W	SOF1	P33750	489 aa	Known RBP	4.57	□□□□□ -1.68
CAB3	YKL088W	GLG1	P36143	616 aa		4.57	□□□□□ -1.68
CAB3	YKL088W	RPF2	P36160	344 aa	Known RBP	4.57	□□□□□ -1.68
CAB3	YKL088W	MRPL37	P36532	105 aa		4.57	□□□□□ -1.68
CAB3	YKL088W	ARA1	P38115	344 aa		4.57	□□□□□ -1.68
CAB3	YKL088W	CTP1	P38152	299 aa		4.57	□□□□□ -1.68
CAB3	YKL088W	FZO1	P38297	855 aa		4.57	□□□□□ -1.68
CAB3	YKL088W	AMA1	P50082	593 aa		4.57	□□□□□ -1.68
CAB3	YKL088W	VPS73	P53142	486 aa	Known RBP	4.57	□□□□□ -1.68
CAB3	YKL088W	MPP6	P53725	186 aa	Predicted RBP	4.57	□□□□□ -1.68
CAB3	YKL088W	ASI1	P54074	624 aa		4.57	□□□□□ -1.68
CAB3	YKL088W	SLG1	P54867	378 aa		4.57	□□□□□ -1.68
CAB3	YKL088W	MUK1	Q02866	612 aa		4.57	□□□□□ -1.68
CAB3	YKL088W	YMR160W	Q03823	816 aa		4.57	□□□□□ -1.68
CAB3	YKL088W	RRP17	Q04031	235 aa	Predicted RBP	4.57	□□□□□ -1.68
CAB3	YKL088W	DCS1	Q06151	350 aa		4.57	□□□□□ -1.68
CAB3	YKL088W	IZH4	Q99393	312 aa		4.57	□□□□□ -1.68
CAB3	YKL088W	HIS3	P06633	220 aa		4.56	□□□□□ -1.68
CAB3	YKL088W	RPL31B	P0C2H9	113 aa	Known RBP	4.56	□□□□□ -1.68
CAB3	YKL088W	UNG1	P12887	359 aa		4.56	□□□□□ -1.68
CAB3	YKL088W	KGD2	P19262	463 aa	Predicted RBP	4.56	□□□□□ -1.68
CAB3	YKL088W	CNE1	P27825	502 aa		4.56	□□□□□ -1.68
CAB3	YKL088W	ATP3	P38077	311 aa	Known RBP	4.56	□□□□□ -1.68
CAB3	YKL088W	HRB1	P38922	454 aa	Known RBP RIP-Chip data	4.56	□□□□□ -1.68	not detected
CAB3	YKL088W	ELO1	P39540	310 aa		4.56	□□□□□ -1.68
CAB3	YKL088W	MTW1	P39731	289 aa		4.56	□□□□□ -1.68
CAB3	YKL088W	PEP8	P40335	379 aa		4.56	□□□□□ -1.68
CAB3	YKL088W	VHS2	P40463	436 aa		4.56	□□□□□ -1.68
CAB3	YKL088W	PTR3	P43606	678 aa		4.56	□□□□□ -1.68
CAB3	YKL088W	PRY1	P47032	299 aa		4.56	□□□□□ -1.68
CAB3	YKL088W	APS3	P47064	194 aa		4.56	□□□□□ -1.68
CAB3	YKL088W	SSN8	P47821	323 aa		4.56	□□□□□ -1.68
CAB3	YKL088W	YIP5	P53108	310 aa		4.56	□□□□□ -1.68
CAB3	YKL088W	PNC1	P53184	216 aa	Known RBP	4.56	□□□□□ -1.68
CAB3	YKL088W	SLT2	Q00772	484 aa		4.56	□□□□□ -1.68
CAB3	YKL088W	PLP1	Q04004	230 aa		4.56	□□□□□ -1.68
CAB3	YKL088W	YDL242W	Q07746	117 aa		4.56	□□□□□ -1.68
CAB3	YKL088W	NOP12	Q08208	459 aa	Known RBP	4.56	□□□□□ -1.68
CAB3	YKL088W	THI20	Q08224	551 aa		4.56	□□□□□ -1.68
CAB3	YKL088W	MDM20	Q12387	796 aa	Known RBP	4.56	□□□□□ -1.68
CAB3	YKL088W	MTR10	Q99189	972 aa		4.56	□□□□□ -1.68
CAB3	YKL088W	GPA2	P10823	449 aa		4.55	□□□□□ -1.68
CAB3	YKL088W	SNA3	P14359	133 aa		4.55	□□□□□ -1.68
CAB3	YKL088W	PRP6	P19735	899 aa	Predicted RBP	4.55	□□□□□ -1.68
CAB3	YKL088W	GID7	P25569	745 aa		4.55	□□□□□ -1.68
CAB3	YKL088W	FUB1	P25659	250 aa		4.55	□□□□□ -1.68
CAB3	YKL088W	GAC1	P28006	793 aa		4.55	□□□□□ -1.68
CAB3	YKL088W	VPH2	P32341	215 aa		4.55	□□□□□ -1.68
CAB3	YKL088W	KRE6	P32486	720 aa		4.55	□□□□□ -1.68
CAB3	YKL088W	RPT5	P33297	434 aa	Known RBP	4.55	□□□□□ -1.68
CAB3	YKL088W	PHO11	P35842	467 aa		4.55	□□□□□ -1.68
CAB3	YKL088W	ECM4	P36156	370 aa		4.55	□□□□□ -1.68
CAB3	YKL088W	ICS2	P38284	255 aa		4.55	□□□□□ -1.68
CAB3	YKL088W	PHO12	P38693	467 aa		4.55	□□□□□ -1.68
CAB3	YKL088W	IMD2	P38697	523 aa	Known RBP	4.55	□□□□□ -1.68
CAB3	YKL088W	YFL012W	P43580	148 aa		4.55	□□□□□ -1.68
CAB3	YKL088W	RRT5	P43607	289 aa		4.55	□□□□□ -1.68
CAB3	YKL088W	TOM22	P49334	152 aa		4.55	□□□□□ -1.68
CAB3	YKL088W	MPS2	P53159	387 aa		4.55	□□□□□ -1.68
CAB3	YKL088W	VPS62	P53285	467 aa		4.55	□□□□□ -1.68
CAB3	YKL088W	YPR003C	P53394	754 aa		4.55	□□□□□ -1.68
CAB3	YKL088W	NOP13	P53883	403 aa	Known RBP RIP-Chip data	4.55	□□□□□ -1.68	not detected
CAB3	YKL088W	LGE1	Q02796	332 aa	Known RBP	4.55	□□□□□ -1.68
CAB3	YKL088W	FMN1	Q03778	218 aa		4.55	□□□□□ -1.68
CAB3	YKL088W	ULA1	Q12059	462 aa		4.55	□□□□□ -1.68
CAB3	YKL088W	VAM3	Q12241	283 aa		4.55	□□□□□ -1.68
CAB3	YKL088W	MED4	Q12343	284 aa		4.55	□□□□□ -1.68
CAB3	YKL088W	NDJ1	Q12366	352 aa		4.55	□□□□□ -1.68
CAB3	YKL088W	SFG1	Q12507	346 aa		4.55	□□□□□ -1.68
CAB3	YKL088W	CAR1	P00812	333 aa	Known RBP	4.55	□□□□□ -1.68
CAB3	YKL088W	SPS4	P09937	338 aa		4.55	□□□□□ -1.68
CAB3	YKL088W	EXO70	P19658	623 aa		4.55	□□□□□ -1.68
CAB3	YKL088W	AMD2	P22580	549 aa		4.55	□□□□□ -1.68
CAB3	YKL088W	PET18	P25362	215 aa		4.55	□□□□□ -1.68
CAB3	YKL088W	LAC1	P28496	418 aa		4.55	□□□□□ -1.68
CAB3	YKL088W	URA10	P30402	227 aa		4.55	□□□□□ -1.68
CAB3	YKL088W	RPC34	P32910	317 aa		4.55	□□□□□ -1.68
CAB3	YKL088W	TPO5	P36029	618 aa		4.55	□□□□□ -1.68
CAB3	YKL088W	SNU114	P36048	1008 aa	Known RBP	4.55	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 38.9 ms