RNA–Protein interactions for RNA: YJL140W

RPB4, Transcript of RNA polymerase II subunit B32, yeast

Gene RPB4, Length 666 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPB4	YJL140W	PTR3	P43606	678 aa		4.9	□□□□□ -1.63
RPB4	YJL140W	MRK1	P50873	501 aa		4.9	□□□□□ -1.63
RPB4	YJL140W	SHY1	P53266	389 aa		4.9	□□□□□ -1.63
RPB4	YJL140W	RPM2	Q02773	1202 aa		4.9	□□□□□ -1.63
RPB4	YJL140W	HFD1	Q04458	532 aa		4.9	□□□□□ -1.63
RPB4	YJL140W	DYN3	Q04949	312 aa		4.9	□□□□□ -1.63
RPB4	YJL140W	VTA1	Q06263	330 aa		4.9	□□□□□ -1.63
RPB4	YJL140W	YOL024W	Q08172	172 aa		4.9	□□□□□ -1.63
RPB4	YJL140W	PFA4	Q12006	378 aa		4.9	□□□□□ -1.63
RPB4	YJL140W	ATG34	Q12292	412 aa		4.9	□□□□□ -1.63
RPB4	YJL140W	GLE1	Q12315	538 aa		4.9	□□□□□ -1.63
RPB4	YJL140W	MDM35	O60200	86 aa		4.89	□□□□□ -1.63
RPB4	YJL140W	CDC21	P06785	304 aa		4.89	□□□□□ -1.63
RPB4	YJL140W	YAK1	P14680	807 aa		4.89	□□□□□ -1.63
RPB4	YJL140W	HOP1	P20050	605 aa		4.89	□□□□□ -1.63
RPB4	YJL140W	DBR1	P24309	405 aa	Known RBP	4.89	□□□□□ -1.63
RPB4	YJL140W	YCR006C	P25350	157 aa		4.89	□□□□□ -1.63
RPB4	YJL140W	LDB16	P25587	256 aa		4.89	□□□□□ -1.63
RPB4	YJL140W	PPG1	P32838	368 aa		4.89	□□□□□ -1.63
RPB4	YJL140W	RPT5	P33297	434 aa	Known RBP	4.89	□□□□□ -1.63
RPB4	YJL140W	STB6	P36085	766 aa		4.89	□□□□□ -1.63
RPB4	YJL140W	MRPL37	P36532	105 aa		4.89	□□□□□ -1.63
RPB4	YJL140W	YHR045W	P38775	560 aa		4.89	□□□□□ -1.63
RPB4	YJL140W	MTG2	P38860	518 aa		4.89	□□□□□ -1.63
RPB4	YJL140W	UTP18	P40362	594 aa	Predicted RBP	4.89	□□□□□ -1.63
RPB4	YJL140W	MET18	P40469	1032 aa		4.89	□□□□□ -1.63
RPB4	YJL140W	SPG5	P42933	373 aa		4.89	□□□□□ -1.63
RPB4	YJL140W	YPT32	P51996	222 aa	Known RBP	4.89	□□□□□ -1.63
RPB4	YJL140W	IMA1	P53051	589 aa		4.89	□□□□□ -1.63
RPB4	YJL140W	YGR016W	P53209	190 aa		4.89	□□□□□ -1.63
RPB4	YJL140W	YGR151C	P53287	111 aa		4.89	□□□□□ -1.63
RPB4	YJL140W	ZRG17	P53735	605 aa		4.89	□□□□□ -1.63
RPB4	YJL140W	RHO3	Q00245	231 aa	Known RBP	4.89	□□□□□ -1.63
RPB4	YJL140W	RRN11	Q04712	507 aa		4.89	□□□□□ -1.63
RPB4	YJL140W	ENT2	Q05785	613 aa		4.89	□□□□□ -1.63
RPB4	YJL140W	RGC1	Q06108	1083 aa	Known RBP	4.89	□□□□□ -1.63
RPB4	YJL140W	ATG26	Q06321	1198 aa		4.89	□□□□□ -1.63
RPB4	YJL140W	YLR030W	Q07967	263 aa		4.89	□□□□□ -1.63
RPB4	YJL140W	SGT1	Q08446	395 aa		4.89	□□□□□ -1.63
RPB4	YJL140W	PST1	Q12355	444 aa		4.89	□□□□□ -1.63
RPB4	YJL140W	POM34	Q12445	299 aa		4.89	□□□□□ -1.63
RPB4	YJL140W	AHA1	Q12449	350 aa	Known RBP	4.89	□□□□□ -1.63
RPB4	YJL140W	SAS5	Q99314	248 aa		4.89	□□□□□ -1.63
RPB4	YJL140W	MEC1	P38111	2368 aa		4.89	□□□□□ -1.63
RPB4	YJL140W	DST1	P07273	309 aa		4.88	□□□□□ -1.63
RPB4	YJL140W	YAR066W	P0CX18	203 aa		4.88	□□□□□ -1.63
RPB4	YJL140W	YHR214W	P0CX19	203 aa		4.88	□□□□□ -1.63
RPB4	YJL140W	PHO81	P17442	1178 aa		4.88	□□□□□ -1.63
RPB4	YJL140W	YSR3	P23501	404 aa		4.88	□□□□□ -1.63
RPB4	YJL140W	NRP1	P32770	719 aa	Known RBP RIP-Chip data	4.88	□□□□□ -1.63	not detected
RPB4	YJL140W	SKN1	P33336	771 aa		4.88	□□□□□ -1.63
RPB4	YJL140W	SDH3	P33421	198 aa		4.88	□□□□□ -1.63
RPB4	YJL140W	AST1	P35183	429 aa		4.88	□□□□□ -1.63
RPB4	YJL140W	YHR033W	P38690	423 aa		4.88	□□□□□ -1.63
RPB4	YJL140W	YEL073C	P39974	107 aa		4.88	□□□□□ -1.63
RPB4	YJL140W	YEN1	P40028	759 aa		4.88	□□□□□ -1.63
RPB4	YJL140W	LRO1	P40345	661 aa		4.88	□□□□□ -1.63
RPB4	YJL140W	DIM1	P41819	318 aa	Known RBP	4.88	□□□□□ -1.63
RPB4	YJL140W	MEP2	P41948	499 aa		4.88	□□□□□ -1.63
RPB4	YJL140W	FMP33	P46998	180 aa		4.88	□□□□□ -1.63
RPB4	YJL140W	ASK10	P48361	1146 aa		4.88	□□□□□ -1.63
RPB4	YJL140W	ALG12	P53730	551 aa		4.88	□□□□□ -1.63
RPB4	YJL140W	PRP38	Q00723	242 aa	Predicted RBP	4.88	□□□□□ -1.63
RPB4	YJL140W	AAT1	Q01802	451 aa		4.88	□□□□□ -1.63
RPB4	YJL140W	TRS23	Q03784	219 aa		4.88	□□□□□ -1.63
RPB4	YJL140W	YMR111C	Q04461	462 aa	Predicted RBP	4.88	□□□□□ -1.63
RPB4	YJL140W	RSF1	Q05043	376 aa		4.88	□□□□□ -1.63
RPB4	YJL140W	YOL159C	Q08300	171 aa		4.88	□□□□□ -1.63
RPB4	YJL140W	YPL272C	Q08984	517 aa		4.88	□□□□□ -1.63
RPB4	YJL140W	GTT2	Q12390	233 aa		4.88	□□□□□ -1.63
RPB4	YJL140W	ADF1	Q2V2Q1	113 aa		4.88	□□□□□ -1.63
RPB4	YJL140W	YKL018C-A	Q3E7A7	99 aa		4.88	□□□□□ -1.63
RPB4	YJL140W	ATP6	P00854	259 aa		4.87	□□□□□ -1.63
RPB4	YJL140W	HXK2	P04807	486 aa	Known RBP	4.87	□□□□□ -1.63
RPB4	YJL140W	TPK2	P06245	380 aa		4.87	□□□□□ -1.63
RPB4	YJL140W	SPT3	P06844	337 aa		4.87	□□□□□ -1.63
RPB4	YJL140W	RPL43A	P0CX25	92 aa	Known RBP	4.87	□□□□□ -1.63
RPB4	YJL140W	RPL43B	P0CX26	92 aa		4.87	□□□□□ -1.63
RPB4	YJL140W	GCD2	P12754	651 aa	Predicted RBP	4.87	□□□□□ -1.63
RPB4	YJL140W	YAP1	P19880	650 aa	Known RBP	4.87	□□□□□ -1.63
RPB4	YJL140W	FEN2	P25621	512 aa	Known RBP	4.87	□□□□□ -1.63
RPB4	YJL140W	TFC1	P32367	649 aa		4.87	□□□□□ -1.63
RPB4	YJL140W	ATP11	P32453	318 aa		4.87	□□□□□ -1.63
RPB4	YJL140W	PET127	P32606	800 aa		4.87	□□□□□ -1.63
RPB4	YJL140W	CAF4	P36130	643 aa		4.87	□□□□□ -1.63
RPB4	YJL140W	RPF2	P36160	344 aa	Known RBP	4.87	□□□□□ -1.63
RPB4	YJL140W	SOL2	P37262	315 aa		4.87	□□□□□ -1.63
RPB4	YJL140W	TRM7	P38238	310 aa	Known RBP	4.87	□□□□□ -1.63
RPB4	YJL140W	NPT1	P39683	429 aa	Known RBP	4.87	□□□□□ -1.63
RPB4	YJL140W	GIM4	P40005	111 aa	Known RBP	4.87	□□□□□ -1.63
RPB4	YJL140W	YNL195C	P40168	261 aa		4.87	□□□□□ -1.63
RPB4	YJL140W	YIL001W	P40560	513 aa		4.87	□□□□□ -1.63
RPB4	YJL140W	GCD10	P41814	478 aa		4.87	□□□□□ -1.63
RPB4	YJL140W	HSP31	Q04432	237 aa		4.87	□□□□□ -1.63
RPB4	YJL140W	SPC2	Q04969	178 aa		4.87	□□□□□ -1.63
RPB4	YJL140W	HOF1	Q05080	669 aa		4.87	□□□□□ -1.63
RPB4	YJL140W	YDL086W	Q07505	273 aa		4.87	□□□□□ -1.63
RPB4	YJL140W	MEU1	Q07938	337 aa	Known RBP RIP-Chip data	4.87	□□□□□ -1.63	not detected
RPB4	YJL140W	YPL245W	Q12179	454 aa	Known RBP	4.87	□□□□□ -1.63
RPB4	YJL140W	RUP1	Q12242	671 aa		4.87	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 17.1 ms