RNA–Protein interactions for RNA: YGL048C

RPT6, Transcript of ATPase of the 19S regulatory particle of the 26S proteasome, yeastyeast

Gene RPT6, Length 1,218 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPT6YGL048C HOS3Q02959 697 aaKnown RBP5.18□□□□□ -1.58
RPT6YGL048C SHE9Q04172 456 aa5.18□□□□□ -1.58
RPT6YGL048C BUD22Q04347 519 aaKnown RBP5.18□□□□□ -1.58
RPT6YGL048C ARP10Q04549 284 aa5.18□□□□□ -1.58
RPT6YGL048C VPS74Q06385 345 aa5.18□□□□□ -1.58
RPT6YGL048C GUP2Q08929 609 aa5.18□□□□□ -1.58
RPT6YGL048C TMA46Q12000 345 aaKnown RBP5.18□□□□□ -1.58
RPT6YGL048C NUR1Q12066 484 aa5.18□□□□□ -1.58
RPT6YGL048C FRE7Q12333 620 aa5.18□□□□□ -1.58
RPT6YGL048C YMR030W-AQ3E760 96 aa5.18□□□□□ -1.58
RPT6YGL048C SRN2Q99176 213 aa5.18□□□□□ -1.58
RPT6YGL048C GCN4P03069 281 aa5.17□□□□□ -1.58
RPT6YGL048C SEC53P07283 254 aaKnown RBP5.17□□□□□ -1.58
RPT6YGL048C RAP1P11938 827 aa5.17□□□□□ -1.58
RPT6YGL048C YAP1P19880 650 aaKnown RBP5.17□□□□□ -1.58
RPT6YGL048C YCL049CP25577 312 aa5.17□□□□□ -1.58
RPT6YGL048C KKQ8P36004 724 aa5.17□□□□□ -1.58
RPT6YGL048C EMC3P36039 253 aa5.17□□□□□ -1.58
RPT6YGL048C NTR2P36118 322 aaPredicted RBP5.17□□□□□ -1.58
RPT6YGL048C ETR1P38071 380 aa5.17□□□□□ -1.58
RPT6YGL048C SEA4P38164 1038 aa5.17□□□□□ -1.58
RPT6YGL048C OLA1P38219 394 aaKnown RBP5.17□□□□□ -1.58
RPT6YGL048C EFM1P38732 585 aa5.17□□□□□ -1.58
RPT6YGL048C YHR045WP38775 560 aa5.17□□□□□ -1.58
RPT6YGL048C WSS1P38838 269 aa5.17□□□□□ -1.58
RPT6YGL048C SEC31P38968 1273 aaKnown RBP5.17□□□□□ -1.58
RPT6YGL048C MRX1P40050 688 aa5.17□□□□□ -1.58
RPT6YGL048C GZF3P42944 551 aaKnown RBP5.17□□□□□ -1.58
RPT6YGL048C STB2P46679 850 aa5.17□□□□□ -1.58
RPT6YGL048C URB2P47108 1174 aa5.17□□□□□ -1.58
RPT6YGL048C SAM50P53969 484 aa5.17□□□□□ -1.58
RPT6YGL048C MRPL13Q02204 264 aa5.17□□□□□ -1.58
RPT6YGL048C YAP6Q03935 383 aa5.17□□□□□ -1.58
RPT6YGL048C VID22Q05934 901 aa5.17□□□□□ -1.58
RPT6YGL048C SEC10Q06245 871 aa5.17□□□□□ -1.58
RPT6YGL048C ATG23Q06671 453 aa5.17□□□□□ -1.58
RPT6YGL048C YET3Q07451 203 aa5.17□□□□□ -1.58
RPT6YGL048C YLR030WQ07967 263 aa5.17□□□□□ -1.58
RPT6YGL048C NBA1Q08229 501 aaKnown RBP5.17□□□□□ -1.58
RPT6YGL048C YPL278CQ08990 100 aa5.17□□□□□ -1.58
RPT6YGL048C CHS5Q12114 671 aaKnown RBP5.17□□□□□ -1.58
RPT6YGL048C YOL107WQ12239 342 aa5.17□□□□□ -1.58
RPT6YGL048C YLR111WQ12528 110 aa5.17□□□□□ -1.58
RPT6YGL048C HXK2P04807 486 aaKnown RBP5.16□□□□□ -1.58
RPT6YGL048C CDC21P06785 304 aa5.16□□□□□ -1.58
RPT6YGL048C ADH4P10127 382 aa5.16□□□□□ -1.58
RPT6YGL048C KIN2P13186 1147 aaKnown RBP5.16□□□□□ -1.58
RPT6YGL048C UTR1P21373 530 aa5.16□□□□□ -1.58
RPT6YGL048C CLB1P24868 471 aa5.16□□□□□ -1.58
RPT6YGL048C SBA1P28707 216 aaKnown RBP5.16□□□□□ -1.58
RPT6YGL048C PRO1P32264 428 aa5.16□□□□□ -1.58
RPT6YGL048C NTH1P32356 751 aa5.16□□□□□ -1.58
RPT6YGL048C PTM1P32857 523 aa5.16□□□□□ -1.58
RPT6YGL048C CYM1P32898 989 aa5.16□□□□□ -1.58
RPT6YGL048C HCS1P34243 683 aa5.16□□□□□ -1.58
RPT6YGL048C TPO5P36029 618 aa5.16□□□□□ -1.58
RPT6YGL048C GLG1P36143 616 aa5.16□□□□□ -1.58
RPT6YGL048C DAD2P36162 133 aa5.16□□□□□ -1.58
RPT6YGL048C SHM2P37291 469 aaKnown RBP5.16□□□□□ -1.58
RPT6YGL048C CHK1P38147 527 aa5.16□□□□□ -1.58
RPT6YGL048C MED8P38304 223 aa5.16□□□□□ -1.58
RPT6YGL048C YMR262WP38430 313 aa5.16□□□□□ -1.58
RPT6YGL048C YHR127WP38833 243 aaKnown RBP5.16□□□□□ -1.58
RPT6YGL048C LIN1P38852 340 aaPredicted RBP5.16□□□□□ -1.58
RPT6YGL048C PEX7P39108 375 aa5.16□□□□□ -1.58
RPT6YGL048C NPT1P39683 429 aaKnown RBP5.16□□□□□ -1.58
RPT6YGL048C MSS2P40990 351 aa5.16□□□□□ -1.58
RPT6YGL048C APS3P47064 194 aa5.16□□□□□ -1.58
RPT6YGL048C COS12P53053 380 aa5.16□□□□□ -1.58
RPT6YGL048C FHN1P53279 174 aa5.16□□□□□ -1.58
RPT6YGL048C SHR3Q02774 210 aa5.16□□□□□ -1.58
RPT6YGL048C GOT1Q03554 138 aa5.16□□□□□ -1.58
RPT6YGL048C SSY1Q03770 852 aa5.16□□□□□ -1.58
RPT6YGL048C TRS23Q03784 219 aa5.16□□□□□ -1.58
RPT6YGL048C ATC1Q04005 294 aa5.16□□□□□ -1.58
RPT6YGL048C GTO3Q04806 366 aa5.16□□□□□ -1.58
RPT6YGL048C RRP45Q05636 305 aaKnown RBP5.16□□□□□ -1.58
RPT6YGL048C ARO10Q06408 635 aa5.16□□□□□ -1.58
RPT6YGL048C LUC7Q07508 261 aaPredicted RBP5.16□□□□□ -1.58
RPT6YGL048C ACF2Q12168 779 aa5.16□□□□□ -1.58
RPT6YGL048C UBX3Q12229 455 aa5.16□□□□□ -1.58
RPT6YGL048C NOT5Q12514 560 aaPredicted RBP5.16□□□□□ -1.58
RPT6YGL048C PRP8P33334 2413 aaKnown RBP5.16□□□□□ -1.58
RPT6YGL048C CDC8P00572 216 aa5.15□□□□□ -1.59
RPT6YGL048C MET3P08536 511 aa5.15□□□□□ -1.59
RPT6YGL048C TOP3P13099 656 aa5.15□□□□□ -1.59
RPT6YGL048C GCY1P14065 312 aaKnown RBP RIP-Chip data5.15□□□□□ -1.59not detected
RPT6YGL048C MDH1P17505 334 aaKnown RBP RIP-Chip data5.15□□□□□ -1.59not detected
RPT6YGL048C HOP1P20050 605 aa5.15□□□□□ -1.59
RPT6YGL048C AMD2P22580 549 aa5.15□□□□□ -1.59
RPT6YGL048C PTP1P25044 335 aa5.15□□□□□ -1.59
RPT6YGL048C YCR016WP25617 290 aaKnown RBP5.15□□□□□ -1.59
RPT6YGL048C IMG1P25626 169 aa5.15□□□□□ -1.59
RPT6YGL048C HOG1P32485 435 aa5.15□□□□□ -1.59
RPT6YGL048C YSC84P32793 468 aa5.15□□□□□ -1.59
RPT6YGL048C YME1P32795 747 aa5.15□□□□□ -1.59
RPT6YGL048C RPT5P33297 434 aaKnown RBP5.15□□□□□ -1.59
RPT6YGL048C SFC1P33303 322 aa5.15□□□□□ -1.59
RPT6YGL048C TAF14P35189 244 aa5.15□□□□□ -1.59
RPT6YGL048C YKL063CP35725 167 aa5.15□□□□□ -1.59
Retrieved 100 of 5,963 RNA–protein pairs in 22.9 ms