RNA–Protein interactions for RNA: YFR010W

UBP6, Transcript of Ubiquitin-specific protease, yeastyeast

Gene UBP6, Length 1,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP6YFR010W DTR1P38125 572 aa3.91□□□□□ -1.78
UBP6YFR010W YHR122WP38829 231 aa3.91□□□□□ -1.78
UBP6YFR010W CRG1P38892 291 aaRIP-Chip data3.91□□□□□ -1.78not detected
UBP6YFR010W PFA3P42836 336 aa3.91□□□□□ -1.78
UBP6YFR010W SPG5P42933 373 aa3.91□□□□□ -1.78
UBP6YFR010W AGP3P43548 558 aa3.91□□□□□ -1.78
UBP6YFR010W SCD6P45978 349 aaKnown RBP RIP-Chip data3.91□□□□□ -1.78not detected
UBP6YFR010W IDS2P46958 469 aa3.91□□□□□ -1.78
UBP6YFR010W UBX6P47049 396 aa3.91□□□□□ -1.78
UBP6YFR010W RPS7BP48164 190 aaKnown RBP3.91□□□□□ -1.78
UBP6YFR010W COS12P53053 380 aa3.91□□□□□ -1.78
UBP6YFR010W ROG1P53118 685 aa3.91□□□□□ -1.78
UBP6YFR010W YGR042WP53227 271 aa3.91□□□□□ -1.78
UBP6YFR010W MRPL50P53724 139 aa3.91□□□□□ -1.78
UBP6YFR010W MTQ1P53944 314 aa3.91□□□□□ -1.78
UBP6YFR010W RIM13Q03792 727 aa3.91□□□□□ -1.78
UBP6YFR010W DNL4Q08387 944 aaPredicted RBP3.91□□□□□ -1.78
UBP6YFR010W AFT2Q08957 416 aa3.91□□□□□ -1.78
UBP6YFR010W GPM2Q12008 311 aa3.91□□□□□ -1.78
UBP6YFR010W PRP46Q12417 451 aaPredicted RBP3.91□□□□□ -1.78
UBP6YFR010W SPO24Q3E752 67 aa3.91□□□□□ -1.78
UBP6YFR010W AI5_BETAQ9ZZX0 354 aa3.91□□□□□ -1.78
UBP6YFR010W YLR415CO13578 112 aa3.9□□□□□ -1.78
UBP6YFR010W QCR2P07257 368 aa3.9□□□□□ -1.78
UBP6YFR010W RPS16AP0CX51 143 aaKnown RBP3.9□□□□□ -1.78
UBP6YFR010W RPS16BP0CX52 143 aaKnown RBP3.9□□□□□ -1.78
UBP6YFR010W GPI12P23797 304 aa3.9□□□□□ -1.78
UBP6YFR010W YOX1P34161 385 aa3.9□□□□□ -1.78
UBP6YFR010W SKT5P34226 696 aa3.9□□□□□ -1.78
UBP6YFR010W PRS4P38063 326 aaPredicted RBP3.9□□□□□ -1.78
UBP6YFR010W YPK3P38070 525 aa3.9□□□□□ -1.78
UBP6YFR010W HMT1P38074 348 aa3.9□□□□□ -1.78
UBP6YFR010W OLA1P38219 394 aaKnown RBP3.9□□□□□ -1.78
UBP6YFR010W PCA1P38360 1216 aa3.9□□□□□ -1.78
UBP6YFR010W BIG1P38813 335 aa3.9□□□□□ -1.78
UBP6YFR010W CCT2P39076 527 aaKnown RBP3.9□□□□□ -1.78
UBP6YFR010W PRP39P39682 629 aaKnown RBP3.9□□□□□ -1.78
UBP6YFR010W ERG28P40030 148 aa3.9□□□□□ -1.78
UBP6YFR010W YNL195CP40168 261 aa3.9□□□□□ -1.78
UBP6YFR010W UTP25P40498 721 aaKnown RBP3.9□□□□□ -1.78
UBP6YFR010W CIN5P40917 295 aa3.9□□□□□ -1.78
UBP6YFR010W IRC7P43623 340 aa3.9□□□□□ -1.78
UBP6YFR010W STB4P50104 949 aa3.9□□□□□ -1.78
UBP6YFR010W YIP3P53633 176 aa3.9□□□□□ -1.78
UBP6YFR010W ASI2P53895 289 aa3.9□□□□□ -1.78
UBP6YFR010W EFM6P53970 246 aa3.9□□□□□ -1.78
UBP6YFR010W YMR160WQ03823 816 aa3.9□□□□□ -1.78
UBP6YFR010W YPD1Q07688 167 aa3.9□□□□□ -1.78
UBP6YFR010W CSM4Q08955 156 aa3.9□□□□□ -1.78
UBP6YFR010W PRS5Q12265 496 aaKnown RBP3.9□□□□□ -1.78
UBP6YFR010W YCL012CQ8J0M4 134 aa3.9□□□□□ -1.78
UBP6YFR010W ADH2P00331 348 aaKnown RBP3.9□□□□□ -1.79
UBP6YFR010W YPT1P01123 206 aaKnown RBP3.9□□□□□ -1.79
UBP6YFR010W GDH1P07262 454 aaKnown RBP3.9□□□□□ -1.79
UBP6YFR010W SPS4P09937 338 aa3.9□□□□□ -1.79
UBP6YFR010W TUP1P16649 713 aa3.9□□□□□ -1.79
UBP6YFR010W ART10P18634 518 aaKnown RBP3.9□□□□□ -1.79
UBP6YFR010W GSH1P32477 678 aa3.9□□□□□ -1.79
UBP6YFR010W ECM25P32525 599 aa3.9□□□□□ -1.79
UBP6YFR010W YBR144CP34215 104 aa3.9□□□□□ -1.79
UBP6YFR010W TAF14P35189 244 aa3.9□□□□□ -1.79
UBP6YFR010W MIC12P38341 106 aa3.9□□□□□ -1.79
UBP6YFR010W URA8P38627 578 aaPredicted RBP3.9□□□□□ -1.79
UBP6YFR010W MMS21P38632 267 aa3.9□□□□□ -1.79
UBP6YFR010W RPH1P39956 796 aa3.9□□□□□ -1.79
UBP6YFR010W POG1P40473 351 aa3.9□□□□□ -1.79
UBP6YFR010W YKE4P40544 346 aa3.9□□□□□ -1.79
UBP6YFR010W SNG1P46950 547 aa3.9□□□□□ -1.79
UBP6YFR010W YJR056CP47115 236 aa3.9□□□□□ -1.79
UBP6YFR010W NPA3P47122 385 aa3.9□□□□□ -1.79
UBP6YFR010W SSN8P47821 323 aa3.9□□□□□ -1.79
UBP6YFR010W YPT11P48559 417 aa3.9□□□□□ -1.79
UBP6YFR010W CWC23P52868 283 aaPredicted RBP3.9□□□□□ -1.79
UBP6YFR010W GET1P53192 235 aa3.9□□□□□ -1.79
UBP6YFR010W MPS1P54199 764 aa3.9□□□□□ -1.79
UBP6YFR010W USA1Q03714 838 aa3.9□□□□□ -1.79
UBP6YFR010W MUM3Q08750 479 aa3.9□□□□□ -1.79
UBP6YFR010W YOR365CQ08844 703 aa3.9□□□□□ -1.79
UBP6YFR010W DAP1Q12091 152 aa3.9□□□□□ -1.79
UBP6YFR010W PKH2Q12236 1081 aaKnown RBP3.9□□□□□ -1.79
UBP6YFR010W POM34Q12445 299 aa3.9□□□□□ -1.79
UBP6YFR010W TRM11Q12463 433 aa3.9□□□□□ -1.79
UBP6YFR010W ZPS1Q12512 249 aa3.9□□□□□ -1.79
UBP6YFR010W QCR7P00128 127 aa3.89□□□□□ -1.79
UBP6YFR010W COX3P00420 269 aa3.89□□□□□ -1.79
UBP6YFR010W HIS4P00815 799 aaKnown RBP3.89□□□□□ -1.79
UBP6YFR010W ATP1P07251 545 aaKnown RBP3.89□□□□□ -1.79
UBP6YFR010W TRP4P07285 380 aaPredicted RBP3.89□□□□□ -1.79
UBP6YFR010W RPL31BP0C2H9 113 aaKnown RBP3.89□□□□□ -1.79
UBP6YFR010W RPL18AP0CX49 186 aaKnown RBP3.89□□□□□ -1.79
UBP6YFR010W RPL18BP0CX50 186 aaKnown RBP3.89□□□□□ -1.79
UBP6YFR010W SNA3P14359 133 aa3.89□□□□□ -1.79
UBP6YFR010W CSM1P25651 190 aa3.89□□□□□ -1.79
UBP6YFR010W DEG1P31115 442 aaKnown RBP3.89□□□□□ -1.79
UBP6YFR010W MSS51P32335 436 aa3.89□□□□□ -1.79
UBP6YFR010W SSO1P32867 290 aa3.89□□□□□ -1.79
UBP6YFR010W CPR5P35176 225 aa3.89□□□□□ -1.79
UBP6YFR010W DUG2P38149 878 aa3.89□□□□□ -1.79
UBP6YFR010W RTC2P38279 296 aa3.89□□□□□ -1.79
UBP6YFR010W SPP381P38282 291 aaPredicted RBP3.89□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 80.6 ms