RNA–Protein interactions for RNA: YER008C

SEC3, Transcript of Subunit of the exocyst complex, yeastyeast

Gene SEC3, Length 4,011 nt, Biotype protein coding, Subcellular localisation Cellular bud .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC3YER008C YOR029WQ12243 111 aa1.19□□□□□ -2.22
SEC3YER008C RDL1Q12305 139 aaKnown RBP1.19□□□□□ -2.22
SEC3YER008C YNL162W-AQ3E7A8 72 aa1.19□□□□□ -2.22
SEC3YER008C FLO1P32768 1537 aa1.19□□□□□ -2.22
SEC3YER008C CBP2P03874 630 aaPredicted RBP1.19□□□□□ -2.22
SEC3YER008C CDC21P06785 304 aa1.19□□□□□ -2.22
SEC3YER008C YMR085WP0CF18 432 aa1.19□□□□□ -2.22
SEC3YER008C SNF3P10870 884 aa1.19□□□□□ -2.22
SEC3YER008C PMR1P13586 950 aa1.19□□□□□ -2.22
SEC3YER008C PMA2P19657 947 aa1.19□□□□□ -2.22
SEC3YER008C MEK1P24719 497 aaPredicted RBP1.19□□□□□ -2.22
SEC3YER008C MSN2P33748 704 aa1.19□□□□□ -2.22
SEC3YER008C YKT6P36015 200 aaKnown RBP1.19□□□□□ -2.22
SEC3YER008C POP1P41812 875 aa1.19□□□□□ -2.22
SEC3YER008C YGR210CP42942 411 aa1.19□□□□□ -2.22
SEC3YER008C ATG27P46989 271 aa1.19□□□□□ -2.22
SEC3YER008C ZPR1P53303 486 aaKnown RBP1.19□□□□□ -2.22
SEC3YER008C YBR255C-AQ3E776 120 aa1.19□□□□□ -2.22
SEC3YER008C CHO2P05374 869 aaKnown RBP1.19□□□□□ -2.22
SEC3YER008C UGA1P17649 471 aa1.19□□□□□ -2.22
SEC3YER008C DBR1P24309 405 aaKnown RBP1.19□□□□□ -2.22
SEC3YER008C YCL068CP25593 260 aa1.19□□□□□ -2.22
SEC3YER008C YUR1P26725 428 aa1.19□□□□□ -2.22
SEC3YER008C PSO2P30620 661 aa1.19□□□□□ -2.22
SEC3YER008C HMX1P32339 317 aa1.19□□□□□ -2.22
SEC3YER008C ARO4P32449 370 aaKnown RBP1.19□□□□□ -2.22
SEC3YER008C FRE1P32791 686 aa1.19□□□□□ -2.22
SEC3YER008C RSM22P36056 628 aa1.19□□□□□ -2.22
SEC3YER008C VHC1P38329 1120 aa1.19□□□□□ -2.22
SEC3YER008C RFC3P38629 340 aa1.19□□□□□ -2.22
SEC3YER008C SSO2P39926 295 aa1.19□□□□□ -2.22
SEC3YER008C SLM1P40485 686 aa1.19□□□□□ -2.22
SEC3YER008C SMM1P53720 384 aaKnown RBP1.19□□□□□ -2.22
SEC3YER008C IST1P53843 298 aaPredicted RBP1.19□□□□□ -2.22
SEC3YER008C AIM33Q04516 312 aa1.19□□□□□ -2.22
SEC3YER008C RTN1Q04947 295 aaKnown RBP1.19□□□□□ -2.22
SEC3YER008C VTA1Q06263 330 aa1.19□□□□□ -2.22
SEC3YER008C CDD1Q06549 142 aa1.19□□□□□ -2.22
SEC3YER008C RAD34Q06665 692 aa1.19□□□□□ -2.22
SEC3YER008C NRT1Q08485 598 aa1.19□□□□□ -2.22
SEC3YER008C YLR112WQ12130 139 aa1.19□□□□□ -2.22
SEC3YER008C TDH3P00359 332 aaKnown RBP RIP-Chip data1.18□□□□□ -2.22not detected
SEC3YER008C RPL18AP0CX49 186 aaKnown RBP1.18□□□□□ -2.22
SEC3YER008C RPL18BP0CX50 186 aaKnown RBP1.18□□□□□ -2.22
SEC3YER008C BOS1P25385 244 aa1.18□□□□□ -2.22
SEC3YER008C GSY2P27472 705 aa1.18□□□□□ -2.22
SEC3YER008C ATP11P32453 318 aa1.18□□□□□ -2.22
SEC3YER008C IML3P38265 245 aa1.18□□□□□ -2.22
SEC3YER008C TIF5P38431 405 aaKnown RBP1.18□□□□□ -2.22
SEC3YER008C VPS45P38932 577 aa1.18□□□□□ -2.22
SEC3YER008C EXO1P39875 702 aa1.18□□□□□ -2.22
SEC3YER008C SEC9P40357 651 aa1.18□□□□□ -2.22
SEC3YER008C LAM5P43560 674 aa1.18□□□□□ -2.22
SEC3YER008C COS5P47187 383 aa1.18□□□□□ -2.22
SEC3YER008C OCA1P50946 238 aaPredicted RBP1.18□□□□□ -2.22
SEC3YER008C NBP1P52919 319 aaPredicted RBP1.18□□□□□ -2.22
SEC3YER008C PRM1P53835 661 aa1.18□□□□□ -2.22
SEC3YER008C IDP3P53982 420 aaKnown RBP1.18□□□□□ -2.22
SEC3YER008C YPL014WQ02606 381 aa1.18□□□□□ -2.22
SEC3YER008C DIG1Q03063 452 aaKnown RBP1.18□□□□□ -2.22
SEC3YER008C COX20Q04935 205 aa1.18□□□□□ -2.22
SEC3YER008C YLH47Q06493 454 aa1.18□□□□□ -2.22
SEC3YER008C VAC14Q06708 880 aa1.18□□□□□ -2.22
SEC3YER008C COS7Q07788 383 aa1.18□□□□□ -2.22
SEC3YER008C AIM45Q12480 344 aaKnown RBP1.18□□□□□ -2.22
SEC3YER008C FMP16Q12497 93 aa1.18□□□□□ -2.22
SEC3YER008C MTR10Q99189 972 aa1.18□□□□□ -2.22
SEC3YER008C GAL4P04386 881 aa1.18□□□□□ -2.22
SEC3YER008C RPL6BP05739 176 aaKnown RBP1.18□□□□□ -2.22
SEC3YER008C POL30P15873 258 aaKnown RBP1.18□□□□□ -2.22
SEC3YER008C CSM1P25651 190 aa1.18□□□□□ -2.22
SEC3YER008C CIN8P27895 1000 aa1.18□□□□□ -2.22
SEC3YER008C CWP1P28319 239 aa1.18□□□□□ -2.22
SEC3YER008C ASF2P32448 525 aaPredicted RBP1.18□□□□□ -2.22
SEC3YER008C RGT1P32862 1170 aa1.18□□□□□ -2.22
SEC3YER008C MTR2P34232 184 aaKnown RBP1.18□□□□□ -2.22
SEC3YER008C SNU114P36048 1008 aaKnown RBP1.18□□□□□ -2.22
SEC3YER008C DTR1P38125 572 aa1.18□□□□□ -2.22
SEC3YER008C CCT2P39076 527 aaKnown RBP1.18□□□□□ -2.22
SEC3YER008C SAS2P40963 338 aa1.18□□□□□ -2.22
SEC3YER008C CDC1P40986 491 aa1.18□□□□□ -2.22
SEC3YER008C AZF1P41696 914 aa1.18□□□□□ -2.22
SEC3YER008C RPL6AQ02326 176 aaKnown RBP1.18□□□□□ -2.22
SEC3YER008C YDR387CQ04162 555 aa1.18□□□□□ -2.22
SEC3YER008C GLO2Q05584 274 aa1.18□□□□□ -2.22
SEC3YER008C RRP45Q05636 305 aaKnown RBP1.18□□□□□ -2.22
SEC3YER008C CTS2Q06350 511 aa1.18□□□□□ -2.22
SEC3YER008C POS5Q06892 414 aa1.18□□□□□ -2.22
SEC3YER008C THP1Q08231 455 aa1.18□□□□□ -2.22
SEC3YER008C DSE3Q08729 430 aa1.18□□□□□ -2.22
SEC3YER008C MYO1P08964 1928 aa1.18□□□□□ -2.22
SEC3YER008C ATP1P07251 545 aaKnown RBP1.18□□□□□ -2.22
SEC3YER008C RPL42AP0CX27 106 aaKnown RBP1.18□□□□□ -2.22
SEC3YER008C RPL42BP0CX28 106 aaKnown RBP1.18□□□□□ -2.22
SEC3YER008C PRP21P32524 280 aaPredicted RBP1.18□□□□□ -2.22
SEC3YER008C PAD1P33751 242 aaKnown RBP RIP-Chip data1.18□□□□□ -2.22not detected
SEC3YER008C YKL162CP36052 402 aa1.18□□□□□ -2.22
SEC3YER008C AAP1P37898 856 aaKnown RBP1.18□□□□□ -2.22
SEC3YER008C ATG7P38862 630 aa1.18□□□□□ -2.22
SEC3YER008C STN1P38960 494 aa1.18□□□□□ -2.22
Retrieved 100 of 5,963 RNA–protein pairs in 14.6 ms