RNA–Protein interactions for RNA: YDR432W

NPL3, Transcript of RNA-binding protein, yeast

Gene NPL3, Length 1,245 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NPL3	YDR432W	CGI121	Q03705	181 aa	Known RBP	11.73	□□□□□ -0.53
NPL3	YDR432W	GTB1	Q04924	702 aa		11.73	□□□□□ -0.53
NPL3	YDR432W	YKL018C-A	Q3E7A7	99 aa		11.73	□□□□□ -0.53
NPL3	YDR432W	ARG81	P05085	880 aa		11.72	□□□□□ -0.53
NPL3	YDR432W	PMR1	P13586	950 aa		11.72	□□□□□ -0.53
NPL3	YDR432W	ATG15	P25641	520 aa		11.72	□□□□□ -0.53
NPL3	YDR432W	DHR2	P36009	735 aa	Predicted RBP	11.72	□□□□□ -0.53
NPL3	YDR432W	SEA4	P38164	1038 aa		11.72	□□□□□ -0.53
NPL3	YDR432W	AYR1	P40471	297 aa		11.72	□□□□□ -0.53
NPL3	YDR432W	HPM1	P40481	377 aa		11.72	□□□□□ -0.53
NPL3	YDR432W	CIN1	P40987	1014 aa		11.72	□□□□□ -0.53
NPL3	YDR432W	ARC35	P53731	342 aa	Known RBP	11.72	□□□□□ -0.53
NPL3	YDR432W	EFR3	Q03653	782 aa	Known RBP	11.72	□□□□□ -0.53
NPL3	YDR432W	YLR413W	Q06689	675 aa		11.72	□□□□□ -0.53
NPL3	YDR432W	COX17	Q12287	69 aa		11.72	□□□□□ -0.53
NPL3	YDR432W	MDM12	Q92328	271 aa		11.72	□□□□□ -0.53
NPL3	YDR432W	RAS2	P01120	322 aa	Known RBP	11.71	□□□□□ -0.53
NPL3	YDR432W	PHO81	P17442	1178 aa		11.71	□□□□□ -0.53
NPL3	YDR432W	AAC3	P18238	307 aa		11.71	□□□□□ -0.53
NPL3	YDR432W	RNH70	P53331	553 aa		11.71	□□□□□ -0.53
NPL3	YDR432W	YDR476C	Q03362	224 aa		11.71	□□□□□ -0.53
NPL3	YDR432W	YHC1	Q05900	231 aa	Known RBP	11.71	□□□□□ -0.53
NPL3	YDR432W	CBP2	P03874	630 aa	Predicted RBP	11.7	□□□□□ -0.54
NPL3	YDR432W	RNA1	P11745	407 aa	Known RBP	11.7	□□□□□ -0.54
NPL3	YDR432W	MRP13	P12686	339 aa		11.7	□□□□□ -0.54
NPL3	YDR432W	PWP1	P21304	576 aa	Known RBP	11.7	□□□□□ -0.54
NPL3	YDR432W	ERG8	P24521	451 aa		11.7	□□□□□ -0.54
NPL3	YDR432W	MEF1	P25039	761 aa		11.7	□□□□□ -0.54
NPL3	YDR432W	RVS161	P25343	265 aa	Known RBP	11.7	□□□□□ -0.54
NPL3	YDR432W	PHO91	P27514	894 aa		11.7	□□□□□ -0.54
NPL3	YDR432W	SNU114	P36048	1008 aa	Known RBP	11.7	□□□□□ -0.54
NPL3	YDR432W	AIM2	P39721	246 aa		11.7	□□□□□ -0.54
NPL3	YDR432W	SHR5	P41912	237 aa		11.7	□□□□□ -0.54
NPL3	YDR432W	RPS12	P48589	143 aa	Known RBP	11.7	□□□□□ -0.54
NPL3	YDR432W	YLR446W	Q06204	433 aa		11.7	□□□□□ -0.54
NPL3	YDR432W	TY4B-P	A0A0B7P3V8	1104 aa		11.69	□□□□□ -0.54
NPL3	YDR432W	SAN1	P22470	610 aa		11.69	□□□□□ -0.54
NPL3	YDR432W	SEC17	P32602	292 aa		11.69	□□□□□ -0.54
NPL3	YDR432W	LHS1	P36016	881 aa		11.69	□□□□□ -0.54
NPL3	YDR432W	SCO2	P38072	301 aa		11.69	□□□□□ -0.54
NPL3	YDR432W	YJL043W	P47053	257 aa		11.69	□□□□□ -0.54
NPL3	YDR432W	CDH1	P53197	566 aa		11.69	□□□□□ -0.54
NPL3	YDR432W	YMR010W	Q03687	405 aa		11.69	□□□□□ -0.54
NPL3	YDR432W	YMR310C	Q04867	317 aa	Predicted RBP	11.69	□□□□□ -0.54
NPL3	YDR432W	YLL007C	Q07799	665 aa		11.69	□□□□□ -0.54
NPL3	YDR432W	EMP70	P32802	667 aa		11.68	□□□□□ -0.54
NPL3	YDR432W	MRPL17	P36528	281 aa		11.68	□□□□□ -0.54
NPL3	YDR432W	GRE3	P38715	327 aa	Known RBP RIP-Chip data	11.68	□□□□□ -0.54	not detected
NPL3	YDR432W	HRB1	P38922	454 aa	Known RBP RIP-Chip data	11.68	□□□□□ -0.54	not detected
NPL3	YDR432W	RLP7	P40693	322 aa	Known RBP	11.68	□□□□□ -0.54
NPL3	YDR432W	MIG2	P53035	382 aa		11.68	□□□□□ -0.54
NPL3	YDR432W	TPC1	P53257	314 aa		11.68	□□□□□ -0.54
NPL3	YDR432W	PFA5	Q03289	374 aa		11.68	□□□□□ -0.54
NPL3	YDR432W	GPN2	Q08726	347 aa	Predicted RBP	11.68	□□□□□ -0.54
NPL3	YDR432W	CWH43	P25618	953 aa		11.67	□□□□□ -0.54
NPL3	YDR432W	FZO1	P38297	855 aa		11.67	□□□□□ -0.54
NPL3	YDR432W	STP2	P38704	541 aa		11.67	□□□□□ -0.54
NPL3	YDR432W	APE4	P38821	490 aa		11.67	□□□□□ -0.54
NPL3	YDR432W	PZF1	P39933	429 aa		11.67	□□□□□ -0.54
NPL3	YDR432W	HOS2	P53096	452 aa	Predicted RBP	11.67	□□□□□ -0.54
NPL3	YDR432W	YGR079W	P53249	370 aa		11.67	□□□□□ -0.54
NPL3	YDR432W	YDR541C	Q03049	344 aa		11.67	□□□□□ -0.54
NPL3	YDR432W	ATP25	Q03153	612 aa		11.67	□□□□□ -0.54
NPL3	YDR432W	DYN3	Q04949	312 aa		11.67	□□□□□ -0.54
NPL3	YDR432W	SNF8	Q12483	233 aa		11.67	□□□□□ -0.54
NPL3	YDR432W	TAD3	Q9URQ3	322 aa		11.67	□□□□□ -0.54
NPL3	YDR432W	YCL042W	P25572	119 aa		11.66	□□□□□ -0.54
NPL3	YDR432W	PBN1	P25580	416 aa		11.66	□□□□□ -0.54
NPL3	YDR432W	MIA40	P36046	403 aa		11.66	□□□□□ -0.54
NPL3	YDR432W	MRPS18	P42847	217 aa		11.66	□□□□□ -0.54
NPL3	YDR432W	UBC9	P50623	157 aa	Predicted RBP	11.66	□□□□□ -0.54
NPL3	YDR432W	MPA43	P53583	542 aa	Predicted RBP	11.66	□□□□□ -0.54
NPL3	YDR432W	SNX3	Q08826	162 aa	Known RBP	11.66	□□□□□ -0.54
NPL3	YDR432W	BAG7	Q12128	409 aa		11.66	□□□□□ -0.54
NPL3	YDR432W	YRM1	Q12340	786 aa		11.66	□□□□□ -0.54
NPL3	YDR432W	PSF1	Q12488	208 aa		11.66	□□□□□ -0.54
NPL3	YDR432W	ATP6	P00854	259 aa		11.65	□□□□□ -0.54
NPL3	YDR432W	ARG3	P05150	338 aa		11.65	□□□□□ -0.54
NPL3	YDR432W	TPK2	P06245	380 aa		11.65	□□□□□ -0.54
NPL3	YDR432W	MCK1	P21965	375 aa	Known RBP	11.65	□□□□□ -0.54
NPL3	YDR432W	KRE6	P32486	720 aa		11.65	□□□□□ -0.54
NPL3	YDR432W	LYS12	P40495	371 aa	Known RBP	11.65	□□□□□ -0.54
NPL3	YDR432W	PLM2	Q04383	521 aa		11.65	□□□□□ -0.54
NPL3	YDR432W	BCP1	Q06338	283 aa		11.65	□□□□□ -0.54
NPL3	YDR432W	MTR10	Q99189	972 aa		11.65	□□□□□ -0.54
NPL3	YDR432W	PBS2	P08018	668 aa		11.64	□□□□□ -0.55
NPL3	YDR432W	SOK1	P40317	901 aa		11.64	□□□□□ -0.55
NPL3	YDR432W	IMA5	P40884	581 aa		11.64	□□□□□ -0.55
NPL3	YDR432W	IAH1	P41734	238 aa		11.64	□□□□□ -0.55
NPL3	YDR432W	RPE1	P46969	238 aa		11.64	□□□□□ -0.55
NPL3	YDR432W	ALG12	P53730	551 aa		11.64	□□□□□ -0.55
NPL3	YDR432W	YPL107W	Q02873	248 aa		11.64	□□□□□ -0.55
NPL3	YDR432W	ACL4	Q03771	387 aa		11.64	□□□□□ -0.55
NPL3	YDR432W	HSP31	Q04432	237 aa		11.64	□□□□□ -0.55
NPL3	YDR432W	DCR2	Q05924	578 aa		11.64	□□□□□ -0.55
NPL3	YDR432W	NSL1	Q12143	216 aa		11.64	□□□□□ -0.55
NPL3	YDR432W	SKS1	Q12505	502 aa		11.64	□□□□□ -0.55
NPL3	YDR432W	YFR010W-A	P0C5N0	62 aa		11.63	□□□□□ -0.55
NPL3	YDR432W	UNG1	P12887	359 aa		11.63	□□□□□ -0.55
NPL3	YDR432W	ERD1	P16151	362 aa		11.63	□□□□□ -0.55

Retrieved 100 of 5,963 RNA–protein pairs in 14.9 ms