RNA–Protein interactions for RNA: YDR225W

HTA1, Transcript of Histone H2A, yeast

Gene HTA1, Length 399 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HTA1	YDR225W	SPT8	P38915	602 aa		3.05	□□□□□ -1.92
HTA1	YDR225W	LCP5	P40079	357 aa	Predicted RBP	3.05	□□□□□ -1.92
HTA1	YDR225W	ATM1	P40416	690 aa		3.05	□□□□□ -1.92
HTA1	YDR225W	TOS2	P50078	622 aa		3.05	□□□□□ -1.92
HTA1	YDR225W	YNR048W	P53740	393 aa		3.05	□□□□□ -1.92
HTA1	YDR225W	RLI1	Q03195	608 aa	Known RBP	3.05	□□□□□ -1.92
HTA1	YDR225W	BET5	Q03630	159 aa		3.05	□□□□□ -1.92
HTA1	YDR225W	VAC14	Q06708	880 aa		3.05	□□□□□ -1.92
HTA1	YDR225W	SRL2	Q12020	392 aa		3.05	□□□□□ -1.92
HTA1	YDR225W	YDR262W	Q12331	272 aa		3.05	□□□□□ -1.92
HTA1	YDR225W	DCP1	Q12517	231 aa	Predicted RBP	3.05	□□□□□ -1.92
HTA1	YDR225W	SPO24	Q3E752	67 aa		3.05	□□□□□ -1.92
HTA1	YDR225W	FSH3	Q99369	266 aa		3.05	□□□□□ -1.92
HTA1	YDR225W	ARG4	P04076	463 aa	Predicted RBP	3.04	□□□□□ -1.92
HTA1	YDR225W	HEM2	P05373	342 aa		3.04	□□□□□ -1.92
HTA1	YDR225W	RPL18A	P0CX49	186 aa	Known RBP	3.04	□□□□□ -1.92
HTA1	YDR225W	RPL18B	P0CX50	186 aa	Known RBP	3.04	□□□□□ -1.92
HTA1	YDR225W	RPS16A	P0CX51	143 aa	Known RBP	3.04	□□□□□ -1.92
HTA1	YDR225W	RPS16B	P0CX52	143 aa	Known RBP	3.04	□□□□□ -1.92
HTA1	YDR225W	MAS2	P11914	482 aa		3.04	□□□□□ -1.92
HTA1	YDR225W	MSS116	P15424	664 aa	Known RBP	3.04	□□□□□ -1.92
HTA1	YDR225W	SAR1	P20606	190 aa	Known RBP	3.04	□□□□□ -1.92
HTA1	YDR225W	MEK1	P24719	497 aa	Predicted RBP	3.04	□□□□□ -1.92
HTA1	YDR225W	YPS1	P32329	569 aa		3.04	□□□□□ -1.92
HTA1	YDR225W	EFB1	P32471	206 aa	Known RBP	3.04	□□□□□ -1.92
HTA1	YDR225W	ERG1	P32476	496 aa	Known RBP	3.04	□□□□□ -1.92
HTA1	YDR225W	TOA2	P32774	122 aa		3.04	□□□□□ -1.92
HTA1	YDR225W	YNK1	P36010	153 aa	Known RBP	3.04	□□□□□ -1.92
HTA1	YDR225W	MRPL37	P36532	105 aa		3.04	□□□□□ -1.92
HTA1	YDR225W	YBR056W	P38081	501 aa		3.04	□□□□□ -1.92
HTA1	YDR225W	RTC2	P38279	296 aa		3.04	□□□□□ -1.92
HTA1	YDR225W	BZZ1	P38822	633 aa		3.04	□□□□□ -1.92
HTA1	YDR225W	PEX18	P38855	283 aa		3.04	□□□□□ -1.92
HTA1	YDR225W	PCL6	P40038	420 aa		3.04	□□□□□ -1.92
HTA1	YDR225W	LYS12	P40495	371 aa	Known RBP	3.04	□□□□□ -1.92
HTA1	YDR225W	GCD10	P41814	478 aa		3.04	□□□□□ -1.92
HTA1	YDR225W	AGX1	P43567	385 aa		3.04	□□□□□ -1.92
HTA1	YDR225W	GWT1	P47026	490 aa		3.04	□□□□□ -1.92
HTA1	YDR225W	GTO1	P48239	356 aa		3.04	□□□□□ -1.92
HTA1	YDR225W	NUP84	P52891	726 aa		3.04	□□□□□ -1.92
HTA1	YDR225W	YGL185C	P53100	379 aa		3.04	□□□□□ -1.92
HTA1	YDR225W	VOA1	P53262	265 aa		3.04	□□□□□ -1.92
HTA1	YDR225W	ARK1	P53974	638 aa		3.04	□□□□□ -1.92
HTA1	YDR225W	YPL068C	Q02749	293 aa		3.04	□□□□□ -1.92
HTA1	YDR225W	ODC1	Q03028	310 aa		3.04	□□□□□ -1.92
HTA1	YDR225W	ERV41	Q04651	352 aa		3.04	□□□□□ -1.92
HTA1	YDR225W	YMR034C	Q05131	434 aa	Predicted RBP	3.04	□□□□□ -1.92
HTA1	YDR225W	RRG8	Q06109	277 aa		3.04	□□□□□ -1.92
HTA1	YDR225W	MRPL35	Q06678	367 aa		3.04	□□□□□ -1.92
HTA1	YDR225W	ASA1	Q06822	443 aa		3.04	□□□□□ -1.92
HTA1	YDR225W	YEH2	Q07950	538 aa		3.04	□□□□□ -1.92
HTA1	YDR225W	PAA1	Q12447	191 aa	Known RBP	3.04	□□□□□ -1.92
HTA1	YDR225W	SSA3	P09435	649 aa	Known RBP	3.03	□□□□□ -1.92
HTA1	YDR225W	YLL053C	P0CD98	152 aa		3.03	□□□□□ -1.92
HTA1	YDR225W	CLN3	P13365	580 aa		3.03	□□□□□ -1.92
HTA1	YDR225W	CKI1	P20485	582 aa		3.03	□□□□□ -1.92
HTA1	YDR225W	AIM17	P23180	465 aa	Known RBP	3.03	□□□□□ -1.92
HTA1	YDR225W	TIP1	P27654	210 aa	Predicted RBP	3.03	□□□□□ -1.92
HTA1	YDR225W	ITR1	P30605	584 aa		3.03	□□□□□ -1.92
HTA1	YDR225W	COX13	P32799	129 aa		3.03	□□□□□ -1.92
HTA1	YDR225W	BUD2	P33314	1104 aa		3.03	□□□□□ -1.92
HTA1	YDR225W	SIP2	P34164	415 aa	Known RBP	3.03	□□□□□ -1.92
HTA1	YDR225W	YMR134W	P40207	237 aa		3.03	□□□□□ -1.92
HTA1	YDR225W	YJL070C	P40361	888 aa		3.03	□□□□□ -1.92
HTA1	YDR225W	AZF1	P41696	914 aa		3.03	□□□□□ -1.92
HTA1	YDR225W	YDL186W	P48568	277 aa		3.03	□□□□□ -1.92
HTA1	YDR225W	MND1	P53102	219 aa		3.03	□□□□□ -1.92
HTA1	YDR225W	RPL15B	P54780	204 aa	Predicted RBP	3.03	□□□□□ -1.92
HTA1	YDR225W	BET4	Q00618	327 aa		3.03	□□□□□ -1.92
HTA1	YDR225W	APC4	Q04601	652 aa		3.03	□□□□□ -1.92
HTA1	YDR225W	YMR254C	Q04838	102 aa		3.03	□□□□□ -1.92
HTA1	YDR225W	YAP7	Q08182	245 aa		3.03	□□□□□ -1.92
HTA1	YDR225W	LDB17	Q12342	491 aa		3.03	□□□□□ -1.92
HTA1	YDR225W	TEF1	P02994	458 aa	Known RBP	3.02	□□□□□ -1.93
HTA1	YDR225W	TPK3	P05986	398 aa		3.02	□□□□□ -1.93
HTA1	YDR225W	ATP1	P07251	545 aa	Known RBP	3.02	□□□□□ -1.93
HTA1	YDR225W	MDM10	P18409	493 aa		3.02	□□□□□ -1.93
HTA1	YDR225W	YCL068C	P25593	260 aa		3.02	□□□□□ -1.93
HTA1	YDR225W	YUR1	P26725	428 aa		3.02	□□□□□ -1.93
HTA1	YDR225W	GLC7	P32598	312 aa	Known RBP	3.02	□□□□□ -1.93
HTA1	YDR225W	RAD23	P32628	398 aa	Known RBP	3.02	□□□□□ -1.93
HTA1	YDR225W	RPT5	P33297	434 aa	Known RBP	3.02	□□□□□ -1.93
HTA1	YDR225W	LOS1	P33418	1100 aa	Predicted RBP	3.02	□□□□□ -1.93
HTA1	YDR225W	PAD1	P33751	242 aa	Known RBP RIP-Chip data	3.02	□□□□□ -1.93	not detected
HTA1	YDR225W	RRP3	P38712	501 aa	Known RBP	3.02	□□□□□ -1.93
HTA1	YDR225W	DHH1	P39517	506 aa	Known RBP	3.02	□□□□□ -1.93
HTA1	YDR225W	HAT2	P39984	401 aa		3.02	□□□□□ -1.93
HTA1	YDR225W	SIM1	P40472	476 aa		3.02	□□□□□ -1.93
HTA1	YDR225W	CDC40	P40968	455 aa	Predicted RBP	3.02	□□□□□ -1.93
HTA1	YDR225W	TOS3	P43637	560 aa		3.02	□□□□□ -1.93
HTA1	YDR225W	YGR117C	P53270	476 aa		3.02	□□□□□ -1.93
HTA1	YDR225W	MRP51	Q02950	344 aa		3.02	□□□□□ -1.93
HTA1	YDR225W	SMP3	Q04174	516 aa		3.02	□□□□□ -1.93
HTA1	YDR225W	YOL075C	Q08234	1294 aa		3.02	□□□□□ -1.93
HTA1	YDR225W	TIM18	Q08749	192 aa		3.02	□□□□□ -1.93
HTA1	YDR225W	MUM3	Q08750	479 aa		3.02	□□□□□ -1.93
HTA1	YDR225W	SGT2	Q12118	346 aa	Known RBP	3.02	□□□□□ -1.93
HTA1	YDR225W	APC2	Q12440	853 aa		3.02	□□□□□ -1.93
HTA1	YDR225W	YOR338W	Q99326	363 aa		3.02	□□□□□ -1.93
HTA1	YDR225W	TDH1	P00360	332 aa	Known RBP	3.01	□□□□□ -1.93

Retrieved 100 of 5,963 RNA–protein pairs in 28.3 ms