RNA–Protein interactions for RNA: ENST00000641947.1

PHGDH-232, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,774 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-232ENST00000641947 SAMM50Q9Y512 469 aa19.58■□□□□ 0.73
PHGDH-232ENST00000641947 NFASCO94856 1347 aa19.57■□□□□ 0.72
PHGDH-232ENST00000641947 RSPH10B2B2RC85 870 aa19.57■□□□□ 0.72
PHGDH-232ENST00000641947 P4HBP07237 508 aaKnown RBP19.57■□□□□ 0.72
PHGDH-232ENST00000641947 RSPH10BP0C881 870 aa19.57■□□□□ 0.72
PHGDH-232ENST00000641947 GNPTABQ3T906 1256 aa19.57■□□□□ 0.72
PHGDH-232ENST00000641947 SEPT14Q6ZU15 432 aa19.57■□□□□ 0.72
PHGDH-232ENST00000641947 KCTD17Q8N5Z5 321 aa19.57■□□□□ 0.72
PHGDH-232ENST00000641947 SENP7Q9BQF6 1050 aa19.57■□□□□ 0.72
PHGDH-232ENST00000641947 ADGRA2Q96PE1 1338 aa19.57■□□□□ 0.72
PHGDH-232ENST00000641947 WDR64B1ANS9 1081 aa19.57■□□□□ 0.72
PHGDH-232ENST00000641947 GCLCP48506 637 aaPredicted RBP19.57■□□□□ 0.72
PHGDH-232ENST00000641947 JAK3P52333 1124 aa19.57■□□□□ 0.72
PHGDH-232ENST00000641947 LRRC41Q15345 812 aa19.57■□□□□ 0.72
PHGDH-232ENST00000641947 ZNF746Q6NUN9 644 aaPredicted RBP19.57■□□□□ 0.72
PHGDH-232ENST00000641947 RGMBQ6NW40 437 aa19.57■□□□□ 0.72
PHGDH-232ENST00000641947 C1orf186Q6ZWK4 172 aa19.57■□□□□ 0.72
PHGDH-232ENST00000641947 NAP1L5Q96NT1 182 aaPredicted RBP19.57■□□□□ 0.72
PHGDH-232ENST00000641947 NACC1Q96RE7 527 aa19.57■□□□□ 0.72
PHGDH-232ENST00000641947 PARK7Q99497 189 aaKnown RBP19.57■□□□□ 0.72
PHGDH-232ENST00000641947 INTS13Q9NVM9 706 aa19.57■□□□□ 0.72
PHGDH-232ENST00000641947 TBC1D7Q9P0N9 293 aa19.57■□□□□ 0.72
PHGDH-232ENST00000641947 TMEM150BA6NC51 233 aa19.56■□□□□ 0.72
PHGDH-232ENST00000641947 CDC25BP30305 580 aa19.56■□□□□ 0.72
PHGDH-232ENST00000641947 QARSP47897 775 aaKnown RBP19.56■□□□□ 0.72
PHGDH-232ENST00000641947 TTI2Q6NXR4 508 aa19.56■□□□□ 0.72
PHGDH-232ENST00000641947 EEPD1Q7L9B9 569 aa19.56■□□□□ 0.72
PHGDH-232ENST00000641947 APTXQ7Z2E3 356 aaKnown RBP19.56■□□□□ 0.72
PHGDH-232ENST00000641947 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.56■□□□□ 0.72
PHGDH-232ENST00000641947 CDHR1Q96JP9 859 aa19.56■□□□□ 0.72
PHGDH-232ENST00000641947 ZSWIM4Q9H7M6 989 aa19.56■□□□□ 0.72
PHGDH-232ENST00000641947 GPBP1L1Q9HC44 474 aaPredicted RBP19.56■□□□□ 0.72
PHGDH-232ENST00000641947 JPH1Q9HDC5 661 aaPredicted RBP19.56■□□□□ 0.72
PHGDH-232ENST00000641947 BMP2KQ9NSY1 1161 aaPredicted RBP19.56■□□□□ 0.72
PHGDH-232ENST00000641947 NRBP1Q9UHY1 535 aa19.56■□□□□ 0.72
PHGDH-232ENST00000641947 ZNF236Q9UL36 1845 aa19.56■□□□□ 0.72
PHGDH-232ENST00000641947 FAM155AB1AL88 458 aaPredicted RBP19.55■□□□□ 0.72
PHGDH-232ENST00000641947 KRT18P05783 430 aaKnown RBP19.55■□□□□ 0.72
PHGDH-232ENST00000641947 SLC10A3P09131 477 aa19.55■□□□□ 0.72
PHGDH-232ENST00000641947 SFNP31947 248 aa19.55■□□□□ 0.72
PHGDH-232ENST00000641947 FAM26FQ5R3K3 315 aa19.55■□□□□ 0.72
PHGDH-232ENST00000641947 CCDC65Q8IXS2 484 aa19.55■□□□□ 0.72
PHGDH-232ENST00000641947 DHTKD1Q96HY7 919 aaPredicted RBP19.55■□□□□ 0.72
PHGDH-232ENST00000641947 DUSP9Q99956 384 aaKnown RBP19.55■□□□□ 0.72
PHGDH-232ENST00000641947 SEMA6BQ9H3T3 888 aa19.55■□□□□ 0.72
PHGDH-232ENST00000641947 PSMA7O14818 248 aa19.55■□□□□ 0.72
PHGDH-232ENST00000641947 LYPLA2O95372 231 aa19.55■□□□□ 0.72
PHGDH-232ENST00000641947 UBA1P22314 1058 aaKnown RBP19.55■□□□□ 0.72
PHGDH-232ENST00000641947 CCNA1P78396 465 aa19.55■□□□□ 0.72
PHGDH-232ENST00000641947 SP4Q02446 784 aa19.55■□□□□ 0.72
PHGDH-232ENST00000641947 PSMD2Q13200 908 aa19.55■□□□□ 0.72
PHGDH-232ENST00000641947 PTPN21Q16825 1174 aa19.55■□□□□ 0.72
PHGDH-232ENST00000641947 CCDC144BQ3MJ40 725 aa19.55■□□□□ 0.72
PHGDH-232ENST00000641947 IRF2BP1Q8IU81 584 aa19.55■□□□□ 0.72
PHGDH-232ENST00000641947 P2RX5Q93086 422 aa19.55■□□□□ 0.72
PHGDH-232ENST00000641947 SLC9A2Q9UBY0 812 aa19.55■□□□□ 0.72
PHGDH-232ENST00000641947 TLL2Q9Y6L7 1015 aa19.55■□□□□ 0.72
PHGDH-232ENST00000641947 PCNTO95613 3336 aa19.54■□□□□ 0.72
PHGDH-232ENST00000641947 ARIH2O95376 493 aa19.54■□□□□ 0.72
PHGDH-232ENST00000641947 CCNE1P24864 410 aa19.54■□□□□ 0.72
PHGDH-232ENST00000641947 CASP5P51878 434 aa19.54■□□□□ 0.72
PHGDH-232ENST00000641947 ACTR2P61160 394 aa19.54■□□□□ 0.72
PHGDH-232ENST00000641947 STIM1Q13586 685 aa19.54■□□□□ 0.72
PHGDH-232ENST00000641947 FAM110CQ1W6H9 321 aa19.54■□□□□ 0.72
PHGDH-232ENST00000641947 HERC4Q5GLZ8 1057 aaPredicted RBP19.54■□□□□ 0.72
PHGDH-232ENST00000641947 ANKRD40Q6AI12 368 aa19.54■□□□□ 0.72
PHGDH-232ENST00000641947 CYFIP1Q7L576 1253 aa19.54■□□□□ 0.72
PHGDH-232ENST00000641947 SFR1Q86XK3 245 aa19.54■□□□□ 0.72
PHGDH-232ENST00000641947 MORC4Q8TE76 937 aa19.54■□□□□ 0.72
PHGDH-232ENST00000641947 TRIM44Q96DX7 344 aaPredicted RBP19.54■□□□□ 0.72
PHGDH-232ENST00000641947 SH2D3AQ9BRG2 576 aa19.54■□□□□ 0.72
PHGDH-232ENST00000641947 PCDHA10Q9Y5I2 948 aa19.54■□□□□ 0.72
PHGDH-232ENST00000641947 ZNF862O60290 1169 aa19.53■□□□□ 0.72
PHGDH-232ENST00000641947 SERPINC1P01008 464 aa19.53■□□□□ 0.72
PHGDH-232ENST00000641947 ADORA2AP29274 412 aa19.53■□□□□ 0.72
PHGDH-232ENST00000641947 ZNF792Q3KQV3 632 aa19.53■□□□□ 0.72
PHGDH-232ENST00000641947 ABHD15Q6UXT9 468 aa19.53■□□□□ 0.72
PHGDH-232ENST00000641947 CCDC60Q8IWA6 550 aaPredicted RBP19.53■□□□□ 0.72
PHGDH-232ENST00000641947 SMAP1Q8IYB5 467 aaPredicted RBP19.53■□□□□ 0.72
PHGDH-232ENST00000641947 GUF1Q8N442 669 aaKnown RBP19.53■□□□□ 0.72
PHGDH-232ENST00000641947 RDM1Q8NG50 284 aa19.53■□□□□ 0.72
PHGDH-232ENST00000641947 MANSC4A6NHS7 340 aaPredicted RBP19.52■□□□□ 0.72
PHGDH-232ENST00000641947 STBD1O95210 358 aa19.52■□□□□ 0.72
PHGDH-232ENST00000641947 PTMAP06454 111 aaKnown RBP19.52■□□□□ 0.72
PHGDH-232ENST00000641947 RARRES1P49788 294 aa19.52■□□□□ 0.72
PHGDH-232ENST00000641947 UBASH3AP57075 661 aa19.52■□□□□ 0.72
PHGDH-232ENST00000641947 PSMC5P62195 406 aa19.52■□□□□ 0.72
PHGDH-232ENST00000641947 CENPPQ6IPU0 288 aa19.52■□□□□ 0.72
PHGDH-232ENST00000641947 FBXO16Q8IX29 292 aaPredicted RBP19.52■□□□□ 0.72
PHGDH-232ENST00000641947 C4orf19Q8IY42 314 aa19.52■□□□□ 0.72
PHGDH-232ENST00000641947 GTPBP4Q9BZE4 634 aaKnown RBP19.52■□□□□ 0.72
PHGDH-232ENST00000641947 ZHX3Q9H4I2 956 aa19.52■□□□□ 0.72
PHGDH-232ENST00000641947 CPA4Q9UI42 421 aa19.52■□□□□ 0.72
PHGDH-232ENST00000641947 DBR1Q9UK59 544 aaKnown RBP19.52■□□□□ 0.72
PHGDH-232ENST00000641947 SYNGAP1Q96PV0 1343 aa19.52■□□□□ 0.72
PHGDH-232ENST00000641947 SFI1A8K8P3 1242 aa19.52■□□□□ 0.71
PHGDH-232ENST00000641947 FARP2O94887 1054 aaPredicted RBP19.52■□□□□ 0.71
PHGDH-232ENST00000641947 YWHABP31946 246 aaKnown RBP19.52■□□□□ 0.71
PHGDH-232ENST00000641947 MAPK7Q13164 816 aa19.52■□□□□ 0.71
PHGDH-232ENST00000641947 TMEM63BQ5T3F8 832 aa19.52■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms