RNA–Protein interactions for RNA: ENST00000641720.1

PHGDH-225, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 548 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-225ENST00000641720 MYOCDQ8IZQ8 938 aa8.55□□□□□ -1.04
PHGDH-225ENST00000641720 STAG2Q8N3U4 1231 aa8.55□□□□□ -1.04
PHGDH-225ENST00000641720 SMRP1Q8NCR6 262 aa8.55□□□□□ -1.04
PHGDH-225ENST00000641720 ZNF689Q96CS4 500 aaPredicted RBP8.55□□□□□ -1.04
PHGDH-225ENST00000641720 TAAR1Q96RJ0 339 aa8.55□□□□□ -1.04
PHGDH-225ENST00000641720 BCAS3Q9H6U6 928 aa8.55□□□□□ -1.04
PHGDH-225ENST00000641720 UPF2Q9HAU5 1272 aaKnown RBP8.55□□□□□ -1.04
PHGDH-225ENST00000641720 PDRG1Q9NUG6 133 aa8.55□□□□□ -1.04
PHGDH-225ENST00000641720 FAM86C1Q9NVL1 165 aa8.55□□□□□ -1.04
PHGDH-225ENST00000641720 MAD2L2Q9UI95 211 aa8.55□□□□□ -1.04
PHGDH-225ENST00000641720 PALM3A6NDB9 673 aaPredicted RBP8.54□□□□□ -1.04
PHGDH-225ENST00000641720 CCDC69A6NI79 296 aa8.54□□□□□ -1.04
PHGDH-225ENST00000641720 PLEKHA8P1O95397 391 aa8.54□□□□□ -1.04
PHGDH-225ENST00000641720 LARGE1O95461 756 aa8.54□□□□□ -1.04
PHGDH-225ENST00000641720 MMP1P03956 469 aa8.54□□□□□ -1.04
PHGDH-225ENST00000641720 PARP1P09874 1014 aaKnown RBP8.54□□□□□ -1.04
PHGDH-225ENST00000641720 NEK4P51957 841 aa8.54□□□□□ -1.04
PHGDH-225ENST00000641720 ZXDAP98168 799 aa8.54□□□□□ -1.04
PHGDH-225ENST00000641720 FGD1P98174 961 aa8.54□□□□□ -1.04
PHGDH-225ENST00000641720 SP2Q02086 613 aa8.54□□□□□ -1.04
PHGDH-225ENST00000641720 IKQ13123 557 aaPredicted RBP8.54□□□□□ -1.04
PHGDH-225ENST00000641720 CLUL1Q15846 466 aa8.54□□□□□ -1.04
PHGDH-225ENST00000641720 PTPROQ16827 1216 aa8.54□□□□□ -1.04
PHGDH-225ENST00000641720 HSDL1Q3SXM5 330 aa8.54□□□□□ -1.04
PHGDH-225ENST00000641720 ASPRV1Q53RT3 343 aa8.54□□□□□ -1.04
PHGDH-225ENST00000641720 BRDTQ58F21 947 aaPredicted RBP8.54□□□□□ -1.04
PHGDH-225ENST00000641720 FAM26DQ5JW98 314 aa8.54□□□□□ -1.04
PHGDH-225ENST00000641720 MYSM1Q5VVJ2 828 aa8.54□□□□□ -1.04
PHGDH-225ENST00000641720 ADGRD2Q7Z7M1 963 aa8.54□□□□□ -1.04
PHGDH-225ENST00000641720 FBXL16Q8N461 479 aa8.54□□□□□ -1.04
PHGDH-225ENST00000641720 FBXL6Q8N531 539 aa8.54□□□□□ -1.04
PHGDH-225ENST00000641720 PPTC7Q8NI37 304 aa8.54□□□□□ -1.04
PHGDH-225ENST00000641720 LINC01599Q8WXQ3 324 aa8.54□□□□□ -1.04
PHGDH-225ENST00000641720 MAF1Q9H063 256 aa8.54□□□□□ -1.04
PHGDH-225ENST00000641720 LMAN2LQ9H0V9 348 aa8.54□□□□□ -1.04
PHGDH-225ENST00000641720 NOD1Q9Y239 953 aa8.54□□□□□ -1.04
PHGDH-225ENST00000641720 TELO2Q9Y4R8 837 aa8.54□□□□□ -1.04
PHGDH-225ENST00000641720 SLC12A7Q9Y666 1083 aa8.54□□□□□ -1.04
PHGDH-225ENST00000641720 MTCL1Q9Y4B5 1905 aaKnown RBP8.54□□□□□ -1.04
PHGDH-225ENST00000641720 EMSYQ7Z589 1322 aa8.54□□□□□ -1.04
PHGDH-225ENST00000641720 GOLGA8AA7E2F4 631 aa8.53□□□□□ -1.04
PHGDH-225ENST00000641720 ZBTB43O43298 467 aa8.53□□□□□ -1.04
PHGDH-225ENST00000641720 CYTH3O43739 400 aa8.53□□□□□ -1.04
PHGDH-225ENST00000641720 GFRA3O60609 400 aa8.53□□□□□ -1.04
PHGDH-225ENST00000641720 CD2BP2O95400 341 aaKnown RBP8.53□□□□□ -1.04
PHGDH-225ENST00000641720 AMHP03971 560 aa8.53□□□□□ -1.04
PHGDH-225ENST00000641720 ARP10275 920 aa8.53□□□□□ -1.04
PHGDH-225ENST00000641720 EVCP57679 992 aa8.53□□□□□ -1.04
PHGDH-225ENST00000641720 COASYQ13057 564 aa8.53□□□□□ -1.04
PHGDH-225ENST00000641720 RABEP1Q15276 862 aa8.53□□□□□ -1.04
PHGDH-225ENST00000641720 DGKDQ16760 1214 aa8.53□□□□□ -1.04
PHGDH-225ENST00000641720 GPATCH4Q5T3I0 446 aaKnown RBP8.53□□□□□ -1.04
PHGDH-225ENST00000641720 ASCL5Q7RTU5 278 aa8.53□□□□□ -1.04
PHGDH-225ENST00000641720 CMTR1Q8N1G2 835 aaKnown RBP8.53□□□□□ -1.04
PHGDH-225ENST00000641720 TMTC2Q8N394 836 aa8.53□□□□□ -1.04
PHGDH-225ENST00000641720 IL31RAQ8NI17 732 aa8.53□□□□□ -1.04
PHGDH-225ENST00000641720 SUSD6Q92537 303 aa8.53□□□□□ -1.04
PHGDH-225ENST00000641720 GPKOWQ92917 476 aaPredicted RBP eCLIP8.53□□□□□ -1.04
PHGDH-225ENST00000641720 ALG1Q9BT22 464 aa8.53□□□□□ -1.04
PHGDH-225ENST00000641720 UBA5Q9GZZ9 404 aa8.53□□□□□ -1.04
PHGDH-225ENST00000641720 EHMT1Q9H9B1 1298 aa8.53□□□□□ -1.04
PHGDH-225ENST00000641720 JMJD4Q9H9V9 463 aa8.53□□□□□ -1.04
PHGDH-225ENST00000641720 NCOA5Q9HCD5 579 aaKnown RBP8.53□□□□□ -1.04
PHGDH-225ENST00000641720 FAM217BQ9NTX9 383 aaPredicted RBP8.53□□□□□ -1.04
PHGDH-225ENST00000641720 TPCN1Q9ULQ1 816 aa8.53□□□□□ -1.04
PHGDH-225ENST00000641720 NAP1L2Q9ULW6 460 aaPredicted RBP8.53□□□□□ -1.04
PHGDH-225ENST00000641720 ADGRA3Q8IWK6 1321 aa8.53□□□□□ -1.04
PHGDH-225ENST00000641720 CNTNAP5Q8WYK1 1306 aa8.53□□□□□ -1.04
PHGDH-225ENST00000641720 MIA3Q5JRA6 1907 aa8.52□□□□□ -1.04
PHGDH-225ENST00000641720 RSPH10B2B2RC85 870 aa8.52□□□□□ -1.05
PHGDH-225ENST00000641720 KLRF2D3W0D1 207 aa8.52□□□□□ -1.05
PHGDH-225ENST00000641720 STXBP3O00186 592 aa8.52□□□□□ -1.05
PHGDH-225ENST00000641720 TREHO43280 583 aa8.52□□□□□ -1.05
PHGDH-225ENST00000641720 PPP1R11O60927 126 aaPredicted RBP8.52□□□□□ -1.05
PHGDH-225ENST00000641720 DTNBO60941 627 aa8.52□□□□□ -1.05
PHGDH-225ENST00000641720 PDGFBP01127 241 aaPredicted RBP8.52□□□□□ -1.05
PHGDH-225ENST00000641720 RB1P06400 928 aa8.52□□□□□ -1.05
PHGDH-225ENST00000641720 RSPH10BP0C881 870 aa8.52□□□□□ -1.05
PHGDH-225ENST00000641720 PDIA3P30101 505 aaKnown RBP8.52□□□□□ -1.05
PHGDH-225ENST00000641720 CDC27P30260 824 aa8.52□□□□□ -1.05
PHGDH-225ENST00000641720 BMPR1AP36894 532 aa8.52□□□□□ -1.05
PHGDH-225ENST00000641720 HSD17B4P51659 736 aa8.52□□□□□ -1.05
PHGDH-225ENST00000641720 RCAN1P53805 252 aa8.52□□□□□ -1.05
PHGDH-225ENST00000641720 MGAT3Q09327 533 aa8.52□□□□□ -1.05
PHGDH-225ENST00000641720 FUT2Q10981 343 aa8.52□□□□□ -1.05
PHGDH-225ENST00000641720 ST3GAL1Q11201 340 aa8.52□□□□□ -1.05
PHGDH-225ENST00000641720 SEMA3FQ13275 785 aa8.52□□□□□ -1.05
PHGDH-225ENST00000641720 KCNC3Q14003 757 aa8.52□□□□□ -1.05
PHGDH-225ENST00000641720 CDC37Q16543 378 aaPredicted RBP8.52□□□□□ -1.05
PHGDH-225ENST00000641720 RTN1Q16799 776 aa8.52□□□□□ -1.05
PHGDH-225ENST00000641720 SEPT14Q6ZU15 432 aa8.52□□□□□ -1.05
PHGDH-225ENST00000641720 TMTC3Q6ZXV5 915 aa8.52□□□□□ -1.05
PHGDH-225ENST00000641720 ADGRF4Q8IZF3 695 aa8.52□□□□□ -1.05
PHGDH-225ENST00000641720 SRBD1Q8N5C6 995 aaKnown RBP8.52□□□□□ -1.05
PHGDH-225ENST00000641720 C7orf31Q8N865 590 aa8.52□□□□□ -1.05
PHGDH-225ENST00000641720 FANCBQ8NB91 859 aa8.52□□□□□ -1.05
PHGDH-225ENST00000641720 VN1R2Q8NFZ6 395 aa8.52□□□□□ -1.05
PHGDH-225ENST00000641720 CTCFLQ8NI51 663 aaPredicted RBP8.52□□□□□ -1.05
PHGDH-225ENST00000641720 IWS1Q96ST2 819 aa8.52□□□□□ -1.05
PHGDH-225ENST00000641720 MAP3K14Q99558 947 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms