RNA–Protein interactions for RNA: ENST00000641573.1

PHGDH-221, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-221ENST00000641573 NLRX1Q86UT6 975 aa14.65□□□□□ -0.06
PHGDH-221ENST00000641573 CATSPER3Q86XQ3 398 aa14.65□□□□□ -0.06
PHGDH-221ENST00000641573 DHX40Q8IX18 779 aaKnown RBP14.65□□□□□ -0.06
PHGDH-221ENST00000641573 AOPEPQ8N6M6 819 aa14.65□□□□□ -0.06
PHGDH-221ENST00000641573 MLKLQ8NB16 471 aa14.65□□□□□ -0.06
PHGDH-221ENST00000641573 SHCBP1Q8NEM2 672 aa14.65□□□□□ -0.06
PHGDH-221ENST00000641573 DNERQ8NFT8 737 aa14.65□□□□□ -0.06
PHGDH-221ENST00000641573 SMCR8Q8TEV9 937 aaPredicted RBP14.65□□□□□ -0.06
PHGDH-221ENST00000641573 IWS1Q96ST2 819 aa14.65□□□□□ -0.06
PHGDH-221ENST00000641573 EIF2AK1Q9BQI3 630 aaKnown RBP14.65□□□□□ -0.06
PHGDH-221ENST00000641573 POLR3CQ9BUI4 534 aaPredicted RBP14.65□□□□□ -0.06
PHGDH-221ENST00000641573 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.65□□□□□ -0.06
PHGDH-221ENST00000641573 UNC45AQ9H3U1 944 aa14.65□□□□□ -0.06
PHGDH-221ENST00000641573 MROH8Q9H579 483 aa14.65□□□□□ -0.06
PHGDH-221ENST00000641573 RMND1Q9NWS8 449 aa14.65□□□□□ -0.06
PHGDH-221ENST00000641573 DACH1Q9UI36 760 aa14.65□□□□□ -0.06
PHGDH-221ENST00000641573 E9PMD0 336 aa14.64□□□□□ -0.07
PHGDH-221ENST00000641573 GOLGA6L19H0YKK7 550 aa14.64□□□□□ -0.07
PHGDH-221ENST00000641573 STAM2O75886 525 aa14.64□□□□□ -0.07
PHGDH-221ENST00000641573 SPATA31C1P0DKV0 1188 aa14.64□□□□□ -0.07
PHGDH-221ENST00000641573 ITGB3BPQ13352 177 aaPredicted RBP14.64□□□□□ -0.07
PHGDH-221ENST00000641573 EPHA7Q15375 998 aa14.64□□□□□ -0.07
PHGDH-221ENST00000641573 B3GNT9Q6UX72 402 aa14.64□□□□□ -0.07
PHGDH-221ENST00000641573 GPRC5AQ8NFJ5 357 aa14.64□□□□□ -0.07
PHGDH-221ENST00000641573 GPRASP2Q96D09 838 aa14.64□□□□□ -0.07
PHGDH-221ENST00000641573 TRIM9Q9C026 710 aa14.64□□□□□ -0.07
PHGDH-221ENST00000641573 LRRC27Q9C0I9 530 aa14.64□□□□□ -0.07
PHGDH-221ENST00000641573 TBC1D22BQ9NU19 505 aa14.64□□□□□ -0.07
PHGDH-221ENST00000641573 ALPK3Q96L96 1907 aa14.64□□□□□ -0.07
PHGDH-221ENST00000641573 SOWAHBA6NEL2 793 aa14.63□□□□□ -0.07
PHGDH-221ENST00000641573 MYMKA6NI61 221 aa14.63□□□□□ -0.07
PHGDH-221ENST00000641573 DDX39AO00148 427 aaKnown RBP14.63□□□□□ -0.07
PHGDH-221ENST00000641573 DHX15O43143 795 aaKnown RBP14.63□□□□□ -0.07
PHGDH-221ENST00000641573 KLRC4O43908 158 aa14.63□□□□□ -0.07
PHGDH-221ENST00000641573 PLA2G4BP0C869 781 aa14.63□□□□□ -0.07
PHGDH-221ENST00000641573 GCLCP48506 637 aaPredicted RBP14.63□□□□□ -0.07
PHGDH-221ENST00000641573 ALDH5A1P51649 535 aaPredicted RBP14.63□□□□□ -0.07
PHGDH-221ENST00000641573 ASIC1P78348 528 aa14.63□□□□□ -0.07
PHGDH-221ENST00000641573 CCNA1P78396 465 aa14.63□□□□□ -0.07
PHGDH-221ENST00000641573 KCNB1Q14721 858 aa14.63□□□□□ -0.07
PHGDH-221ENST00000641573 STXBP2Q15833 593 aa14.63□□□□□ -0.07
PHGDH-221ENST00000641573 KMT5BQ4FZB7 885 aa14.63□□□□□ -0.07
PHGDH-221ENST00000641573 WDR78Q5VTH9 848 aa14.63□□□□□ -0.07
PHGDH-221ENST00000641573 POTEGQ6S5H5 508 aa14.63□□□□□ -0.07
PHGDH-221ENST00000641573 FAM133AQ8N9E0 248 aa14.63□□□□□ -0.07
PHGDH-221ENST00000641573 CCDC47Q96A33 483 aaKnown RBP14.63□□□□□ -0.07
PHGDH-221ENST00000641573 DYDC2Q96IM9 177 aa14.63□□□□□ -0.07
PHGDH-221ENST00000641573 INPP4AQ96PE3 977 aaPredicted RBP14.63□□□□□ -0.07
PHGDH-221ENST00000641573 MMP19Q99542 508 aa14.63□□□□□ -0.07
PHGDH-221ENST00000641573 HSD17B14Q9BPX1 270 aa14.63□□□□□ -0.07
PHGDH-221ENST00000641573 TUFT1Q9NNX1 390 aa14.63□□□□□ -0.07
PHGDH-221ENST00000641573 RGL1Q9NZL6 768 aa14.63□□□□□ -0.07
PHGDH-221ENST00000641573 ADD3Q9UEY8 706 aaKnown RBP14.63□□□□□ -0.07
PHGDH-221ENST00000641573 ASTN1O14525 1302 aa14.63□□□□□ -0.07
PHGDH-221ENST00000641573 SMTNL1A8MU46 457 aa14.62□□□□□ -0.07
PHGDH-221ENST00000641573 MAFGO15525 162 aa14.62□□□□□ -0.07
PHGDH-221ENST00000641573 ATP9AO75110 1047 aa14.62□□□□□ -0.07
PHGDH-221ENST00000641573 SSBP05455 408 aaKnown RBP eCLIP14.62□□□□□ -0.07
PHGDH-221ENST00000641573 CYP4A11Q02928 519 aa14.62□□□□□ -0.07
PHGDH-221ENST00000641573 SEMA3FQ13275 785 aa14.62□□□□□ -0.07
PHGDH-221ENST00000641573 CTTNQ14247 550 aaKnown RBP14.62□□□□□ -0.07
PHGDH-221ENST00000641573 KCTD2Q14681 263 aa14.62□□□□□ -0.07
PHGDH-221ENST00000641573 ZNF658Q5TYW1 1059 aaPredicted RBP14.62□□□□□ -0.07
PHGDH-221ENST00000641573 MIER3Q7Z3K6 550 aa14.62□□□□□ -0.07
PHGDH-221ENST00000641573 KCTD17Q8N5Z5 321 aa14.62□□□□□ -0.07
PHGDH-221ENST00000641573 ANKRD13CQ8N6S4 541 aa14.62□□□□□ -0.07
PHGDH-221ENST00000641573 C11orf49Q9H6J7 331 aa14.62□□□□□ -0.07
PHGDH-221ENST00000641573 MORF4L1Q9UBU8 362 aa14.62□□□□□ -0.07
PHGDH-221ENST00000641573 DNM3Q9UQ16 869 aa14.62□□□□□ -0.07
PHGDH-221ENST00000641573 LCTP09848 1927 aa14.61□□□□□ -0.07
PHGDH-221ENST00000641573 B4DLN1 442 aa14.61□□□□□ -0.07
PHGDH-221ENST00000641573 IKBKBO14920 756 aa14.61□□□□□ -0.07
PHGDH-221ENST00000641573 EIF3JO75822 258 aaKnown RBP14.61□□□□□ -0.07
PHGDH-221ENST00000641573 RGS20O76081 388 aa14.61□□□□□ -0.07
PHGDH-221ENST00000641573 SLITRK3O94933 977 aa14.61□□□□□ -0.07
PHGDH-221ENST00000641573 HMGCRP04035 888 aa14.61□□□□□ -0.07
PHGDH-221ENST00000641573 PGK2P07205 417 aa14.61□□□□□ -0.07
PHGDH-221ENST00000641573 FCER1AP12319 257 aa14.61□□□□□ -0.07
PHGDH-221ENST00000641573 PSMC6P62333 389 aa14.61□□□□□ -0.07
PHGDH-221ENST00000641573 PLCB2Q00722 1185 aa14.61□□□□□ -0.07
PHGDH-221ENST00000641573 CCDC173Q0VFZ6 552 aa14.61□□□□□ -0.07
PHGDH-221ENST00000641573 GNPTABQ3T906 1256 aa14.61□□□□□ -0.07
PHGDH-221ENST00000641573 CT47A1Q5JQC4 288 aaPredicted RBP14.61□□□□□ -0.07
PHGDH-221ENST00000641573 CNNM4Q6P4Q7 775 aa14.61□□□□□ -0.07
PHGDH-221ENST00000641573 TPH2Q8IWU9 490 aa14.61□□□□□ -0.07
PHGDH-221ENST00000641573 SMYD4Q8IYR2 804 aaPredicted RBP14.61□□□□□ -0.07
PHGDH-221ENST00000641573 NEK9Q8TD19 979 aa14.61□□□□□ -0.07
PHGDH-221ENST00000641573 CDHR1Q96JP9 859 aa14.61□□□□□ -0.07
PHGDH-221ENST00000641573 PORCNQ9H237 461 aa14.61□□□□□ -0.07
PHGDH-221ENST00000641573 BMP2KQ9NSY1 1161 aaPredicted RBP14.61□□□□□ -0.07
PHGDH-221ENST00000641573 DNAJC25-GNG10A0A024R161 153 aa14.6□□□□□ -0.07
PHGDH-221ENST00000641573 PVALEFA0A1B0GWK0 134 aa14.6□□□□□ -0.07
PHGDH-221ENST00000641573 SPATA31C2B4DYI2 1134 aa14.6□□□□□ -0.07
PHGDH-221ENST00000641573 PPP1R3GB7ZBB8 358 aa14.6□□□□□ -0.07
PHGDH-221ENST00000641573 AP5Z1O43299 807 aa14.6□□□□□ -0.07
PHGDH-221ENST00000641573 RHOBTB3O94955 611 aa14.6□□□□□ -0.07
PHGDH-221ENST00000641573 EYA4O95677 639 aa14.6□□□□□ -0.07
PHGDH-221ENST00000641573 CD44P16070 742 aaKnown RBP14.6□□□□□ -0.07
PHGDH-221ENST00000641573 KCNA2P16389 499 aa14.6□□□□□ -0.07
PHGDH-221ENST00000641573 MUTP22033 750 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms