RNA–Protein interactions for RNA: ENST00000641513.1

PHGDH-219, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-219ENST00000641513 SP4Q02446 784 aa9.84□□□□□ -0.83
PHGDH-219ENST00000641513 ITGB3BPQ13352 177 aaPredicted RBP9.84□□□□□ -0.83
PHGDH-219ENST00000641513 KCTD2Q14681 263 aa9.84□□□□□ -0.83
PHGDH-219ENST00000641513 Q3C1V9 767 aa9.84□□□□□ -0.83
PHGDH-219ENST00000641513 SPRYD7Q5W111 196 aa9.84□□□□□ -0.83
PHGDH-219ENST00000641513 SEPT14Q6ZU15 432 aa9.84□□□□□ -0.83
PHGDH-219ENST00000641513 GIMAP8Q8ND71 665 aaPredicted RBP9.84□□□□□ -0.83
PHGDH-219ENST00000641513 DNERQ8NFT8 737 aa9.84□□□□□ -0.83
PHGDH-219ENST00000641513 NEK9Q8TD19 979 aa9.84□□□□□ -0.83
PHGDH-219ENST00000641513 PIGOQ8TEQ8 1089 aa9.84□□□□□ -0.83
PHGDH-219ENST00000641513 BRI3BPQ8WY22 251 aa9.84□□□□□ -0.83
PHGDH-219ENST00000641513 HPS3Q969F9 1004 aa9.84□□□□□ -0.83
PHGDH-219ENST00000641513 GPRASP2Q96D09 838 aa9.84□□□□□ -0.83
PHGDH-219ENST00000641513 CDHR1Q96JP9 859 aa9.84□□□□□ -0.83
PHGDH-219ENST00000641513 NACC1Q96RE7 527 aa9.84□□□□□ -0.83
PHGDH-219ENST00000641513 IWS1Q96ST2 819 aa9.84□□□□□ -0.83
PHGDH-219ENST00000641513 LXNQ9BS40 222 aa9.84□□□□□ -0.83
PHGDH-219ENST00000641513 XPO4Q9C0E2 1151 aaKnown RBP9.84□□□□□ -0.83
PHGDH-219ENST00000641513 BHMT2Q9H2M3 363 aa9.84□□□□□ -0.83
PHGDH-219ENST00000641513 MROH8Q9H579 483 aa9.84□□□□□ -0.83
PHGDH-219ENST00000641513 RWDD2AQ9UIY3 292 aa9.84□□□□□ -0.83
PHGDH-219ENST00000641513 MGAMO43451 1857 aa9.83□□□□□ -0.84
PHGDH-219ENST00000641513 ARHGEF35A5YM69 484 aa9.83□□□□□ -0.84
PHGDH-219ENST00000641513 ATP9AO75110 1047 aa9.83□□□□□ -0.84
PHGDH-219ENST00000641513 TBCAO75347 108 aaKnown RBP9.83□□□□□ -0.84
PHGDH-219ENST00000641513 SLITRK3O94933 977 aa9.83□□□□□ -0.84
PHGDH-219ENST00000641513 ITGBL1O95965 494 aaPredicted RBP9.83□□□□□ -0.84
PHGDH-219ENST00000641513 PGK2P07205 417 aa9.83□□□□□ -0.84
PHGDH-219ENST00000641513 P4HBP07237 508 aaKnown RBP9.83□□□□□ -0.84
PHGDH-219ENST00000641513 ZBTB48P10074 688 aaPredicted RBP9.83□□□□□ -0.84
PHGDH-219ENST00000641513 SKILP12757 684 aa9.83□□□□□ -0.84
PHGDH-219ENST00000641513 CYP11B2P19099 503 aa9.83□□□□□ -0.84
PHGDH-219ENST00000641513 PPP1R2P41236 205 aa9.83□□□□□ -0.84
PHGDH-219ENST00000641513 SLC12A3P55017 1021 aa9.83□□□□□ -0.84
PHGDH-219ENST00000641513 UBASH3AP57075 661 aa9.83□□□□□ -0.84
PHGDH-219ENST00000641513 C1QTNF8P60827 252 aa9.83□□□□□ -0.84
PHGDH-219ENST00000641513 KRT76Q01546 638 aa9.83□□□□□ -0.84
PHGDH-219ENST00000641513 LRMPQ12912 555 aa9.83□□□□□ -0.84
PHGDH-219ENST00000641513 STK4Q13043 487 aa9.83□□□□□ -0.84
PHGDH-219ENST00000641513 COASYQ13057 564 aa9.83□□□□□ -0.84
PHGDH-219ENST00000641513 PSMD2Q13200 908 aa9.83□□□□□ -0.84
PHGDH-219ENST00000641513 HERC4Q5GLZ8 1057 aaPredicted RBP9.83□□□□□ -0.84
PHGDH-219ENST00000641513 CST9Q5W186 159 aa9.83□□□□□ -0.84
PHGDH-219ENST00000641513 ANKRD23Q86SG2 305 aa9.83□□□□□ -0.84
PHGDH-219ENST00000641513 ADSSL1Q8N142 457 aa9.83□□□□□ -0.84
PHGDH-219ENST00000641513 ANKRD13CQ8N6S4 541 aa9.83□□□□□ -0.84
PHGDH-219ENST00000641513 SYT2Q8N9I0 419 aaPredicted RBP9.83□□□□□ -0.84
PHGDH-219ENST00000641513 ANKRD20A12PQ8NF67 263 aa9.83□□□□□ -0.84
PHGDH-219ENST00000641513 GPRC5AQ8NFJ5 357 aa9.83□□□□□ -0.84
PHGDH-219ENST00000641513 ANKRD7Q92527 254 aa9.83□□□□□ -0.84
PHGDH-219ENST00000641513 DHTKD1Q96HY7 919 aaPredicted RBP9.83□□□□□ -0.84
PHGDH-219ENST00000641513 MS4A4AQ96JQ5 239 aa9.83□□□□□ -0.84
PHGDH-219ENST00000641513 TRIM47Q96LD4 638 aa9.83□□□□□ -0.84
PHGDH-219ENST00000641513 HSD17B14Q9BPX1 270 aa9.83□□□□□ -0.84
PHGDH-219ENST00000641513 SAMSN1Q9NSI8 373 aaKnown RBP9.83□□□□□ -0.84
PHGDH-219ENST00000641513 TBC1D7Q9P0N9 293 aa9.83□□□□□ -0.84
PHGDH-219ENST00000641513 NRBP1Q9UHY1 535 aa9.83□□□□□ -0.84
PHGDH-219ENST00000641513 DOCK3Q8IZD9 2030 aa9.82□□□□□ -0.84
PHGDH-219ENST00000641513 BICDL2A1A5D9 508 aa9.82□□□□□ -0.84
PHGDH-219ENST00000641513 TRIM49BA6NDI0 452 aa9.82□□□□□ -0.84
PHGDH-219ENST00000641513 SOWAHBA6NEL2 793 aa9.82□□□□□ -0.84
PHGDH-219ENST00000641513 WDR64B1ANS9 1081 aa9.82□□□□□ -0.84
PHGDH-219ENST00000641513 MAFGO15525 162 aa9.82□□□□□ -0.84
PHGDH-219ENST00000641513 DHX15O43143 795 aaKnown RBP9.82□□□□□ -0.84
PHGDH-219ENST00000641513 CAPN15O75808 1086 aa9.82□□□□□ -0.84
PHGDH-219ENST00000641513 EIF3JO75822 258 aaKnown RBP9.82□□□□□ -0.84
PHGDH-219ENST00000641513 FAM13AO94988 1023 aa9.82□□□□□ -0.84
PHGDH-219ENST00000641513 TNNT1P13805 278 aa9.82□□□□□ -0.84
PHGDH-219ENST00000641513 MUTP22033 750 aa9.82□□□□□ -0.84
PHGDH-219ENST00000641513 SFPQP23246 707 aaKnown RBP eCLIP9.82□□□□□ -0.84
PHGDH-219ENST00000641513 SFNP31947 248 aa9.82□□□□□ -0.84
PHGDH-219ENST00000641513 GCLCP48506 637 aaPredicted RBP9.82□□□□□ -0.84
PHGDH-219ENST00000641513 JAK3P52333 1124 aa9.82□□□□□ -0.84
PHGDH-219ENST00000641513 LRRC41Q15345 812 aa9.82□□□□□ -0.84
PHGDH-219ENST00000641513 FAM26FQ5R3K3 315 aa9.82□□□□□ -0.84
PHGDH-219ENST00000641513 TRMT1LQ7Z2T5 733 aaKnown RBP9.82□□□□□ -0.84
PHGDH-219ENST00000641513 CCAR2Q8N163 923 aaKnown RBP9.82□□□□□ -0.84
PHGDH-219ENST00000641513 ZNF784Q8NCA9 323 aaPredicted RBP9.82□□□□□ -0.84
PHGDH-219ENST00000641513 P2RX5Q93086 422 aa9.82□□□□□ -0.84
PHGDH-219ENST00000641513 DNAJC19Q96DA6 116 aa9.82□□□□□ -0.84
PHGDH-219ENST00000641513 INPP4AQ96PE3 977 aaPredicted RBP9.82□□□□□ -0.84
PHGDH-219ENST00000641513 PARK7Q99497 189 aaKnown RBP9.82□□□□□ -0.84
PHGDH-219ENST00000641513 HSD3B7Q9H2F3 369 aa9.82□□□□□ -0.84
PHGDH-219ENST00000641513 R3HDMLQ9H3Y0 253 aa9.82□□□□□ -0.84
PHGDH-219ENST00000641513 ZSWIM4Q9H7M6 989 aa9.82□□□□□ -0.84
PHGDH-219ENST00000641513 EFCC1Q9HA90 598 aa9.82□□□□□ -0.84
PHGDH-219ENST00000641513 MAGEC2Q9UBF1 373 aaPredicted RBP9.82□□□□□ -0.84
PHGDH-219ENST00000641513 SLC45A1Q9Y2W3 748 aa9.82□□□□□ -0.84
PHGDH-219ENST00000641513 RIOK3O14730 519 aaKnown RBP9.81□□□□□ -0.84
PHGDH-219ENST00000641513 ZBTB39O15060 712 aa9.81□□□□□ -0.84
PHGDH-219ENST00000641513 CCNE1P24864 410 aa9.81□□□□□ -0.84
PHGDH-219ENST00000641513 QARSP47897 775 aaKnown RBP9.81□□□□□ -0.84
PHGDH-219ENST00000641513 FSTL1Q12841 308 aa9.81□□□□□ -0.84
PHGDH-219ENST00000641513 GIT2Q14161 759 aa9.81□□□□□ -0.84
PHGDH-219ENST00000641513 FILIP1LQ4L180 1135 aa9.81□□□□□ -0.84
PHGDH-219ENST00000641513 ARSHQ5FYA8 562 aa9.81□□□□□ -0.84
PHGDH-219ENST00000641513 CEP135Q66GS9 1140 aa9.81□□□□□ -0.84
PHGDH-219ENST00000641513 ZNF746Q6NUN9 644 aaPredicted RBP9.81□□□□□ -0.84
PHGDH-219ENST00000641513 RINT1Q6NUQ1 792 aa9.81□□□□□ -0.84
PHGDH-219ENST00000641513 B3GNT9Q6UX72 402 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms