RNA–Protein interactions for RNA: ENST00000641421.1

CASC19-230, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 1,530 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-230ENST00000641421 HMGCS2P54868 508 aa11.77□□□□□ -0.52
CASC19-230ENST00000641421 RPS6P62753 249 aaKnown RBP11.77□□□□□ -0.52
CASC19-230ENST00000641421 ADAM9Q13443 819 aa11.77□□□□□ -0.52
CASC19-230ENST00000641421 MEA1Q16626 185 aa11.77□□□□□ -0.52
CASC19-230ENST00000641421 KNOP1Q1ED39 458 aaKnown RBP11.77□□□□□ -0.52
CASC19-230ENST00000641421 BMT2Q1RMZ1 405 aa11.77□□□□□ -0.52
CASC19-230ENST00000641421 NOL9Q5SY16 702 aaKnown RBP11.77□□□□□ -0.52
CASC19-230ENST00000641421 NSMFQ6X4W1 530 aa11.77□□□□□ -0.52
CASC19-230ENST00000641421 RNF207Q6ZRF8 634 aa11.77□□□□□ -0.52
CASC19-230ENST00000641421 C1orf186Q6ZWK4 172 aa11.77□□□□□ -0.52
CASC19-230ENST00000641421 ERO1AQ96HE7 468 aa11.77□□□□□ -0.52
CASC19-230ENST00000641421 CHP1Q99653 195 aa11.77□□□□□ -0.52
CASC19-230ENST00000641421 AGO4Q9HCK5 861 aaKnown RBP11.77□□□□□ -0.52
CASC19-230ENST00000641421 LZTFL1Q9NQ48 299 aa11.77□□□□□ -0.52
CASC19-230ENST00000641421 RNF146Q9NTX7 359 aa11.77□□□□□ -0.52
CASC19-230ENST00000641421 AGPAT5Q9NUQ2 364 aa11.77□□□□□ -0.52
CASC19-230ENST00000641421 TMOD4Q9NZQ9 345 aa11.77□□□□□ -0.52
CASC19-230ENST00000641421 PKD2L1Q9P0L9 805 aa11.77□□□□□ -0.52
CASC19-230ENST00000641421 ZNF215Q9UL58 517 aaPredicted RBP11.77□□□□□ -0.52
CASC19-230ENST00000641421 FZD1Q9UP38 647 aa11.77□□□□□ -0.52
CASC19-230ENST00000641421 PDXKO00764 312 aa11.76□□□□□ -0.53
CASC19-230ENST00000641421 CALUO43852 315 aaPredicted RBP11.76□□□□□ -0.53
CASC19-230ENST00000641421 URI1O94763 535 aaPredicted RBP11.76□□□□□ -0.53
CASC19-230ENST00000641421 PRPF6O94906 941 aaKnown RBP11.76□□□□□ -0.53
CASC19-230ENST00000641421 NDUFA10O95299 355 aa11.76□□□□□ -0.53
CASC19-230ENST00000641421 MYBP10242 640 aa11.76□□□□□ -0.53
CASC19-230ENST00000641421 MYCLP12524 364 aaPredicted RBP11.76□□□□□ -0.53
CASC19-230ENST00000641421 DSG3P32926 999 aa11.76□□□□□ -0.53
CASC19-230ENST00000641421 OAZ1P54368 228 aa11.76□□□□□ -0.53
CASC19-230ENST00000641421 MARSP56192 900 aaKnown RBP11.76□□□□□ -0.53
CASC19-230ENST00000641421 MRPS9P82933 396 aaKnown RBP11.76□□□□□ -0.53
CASC19-230ENST00000641421 PGM5Q15124 567 aa11.76□□□□□ -0.53
CASC19-230ENST00000641421 WDR59Q6PJI9 974 aa11.76□□□□□ -0.53
CASC19-230ENST00000641421 ZNF710Q8N1W2 664 aa11.76□□□□□ -0.53
CASC19-230ENST00000641421 BANK1Q8NDB2 785 aa11.76□□□□□ -0.53
CASC19-230ENST00000641421 REPS2Q8NFH8 660 aa11.76□□□□□ -0.53
CASC19-230ENST00000641421 WDR24Q96S15 920 aa11.76□□□□□ -0.53
CASC19-230ENST00000641421 LXNQ9BS40 222 aa11.76□□□□□ -0.53
CASC19-230ENST00000641421 MMRN2Q9H8L6 949 aa11.76□□□□□ -0.53
CASC19-230ENST00000641421 OLFML3Q9NRN5 406 aa11.76□□□□□ -0.53
CASC19-230ENST00000641421 KCND2Q9NZV8 630 aa11.76□□□□□ -0.53
CASC19-230ENST00000641421 TRAF3IP3Q9Y228 551 aa11.76□□□□□ -0.53
CASC19-230ENST00000641421 RBBP6Q7Z6E9 1792 aaKnown RBP11.76□□□□□ -0.53
CASC19-230ENST00000641421 SSC5DA1L4H1 1573 aa11.76□□□□□ -0.53
CASC19-230ENST00000641421 ARHGEF35A5YM69 484 aa11.76□□□□□ -0.53
CASC19-230ENST00000641421 ZBTB39O15060 712 aa11.76□□□□□ -0.53
CASC19-230ENST00000641421 DHX15O43143 795 aaKnown RBP11.76□□□□□ -0.53
CASC19-230ENST00000641421 KIF5CO60282 957 aa11.76□□□□□ -0.53
CASC19-230ENST00000641421 GCNT3O95395 438 aa11.76□□□□□ -0.53
CASC19-230ENST00000641421 P4HBP07237 508 aaKnown RBP11.76□□□□□ -0.53
CASC19-230ENST00000641421 CYLC1P35663 651 aaPredicted RBP11.76□□□□□ -0.53
CASC19-230ENST00000641421 CDK17Q00537 523 aa11.76□□□□□ -0.53
CASC19-230ENST00000641421 NCBP1Q09161 790 aaKnown RBP11.76□□□□□ -0.53
CASC19-230ENST00000641421 MTMR1Q13613 665 aa11.76□□□□□ -0.53
CASC19-230ENST00000641421 BAATQ14032 418 aaPredicted RBP11.76□□□□□ -0.53
CASC19-230ENST00000641421 COG2Q14746 738 aa11.76□□□□□ -0.53
CASC19-230ENST00000641421 ARHGAP29Q52LW3 1261 aa11.76□□□□□ -0.53
CASC19-230ENST00000641421 ARHGEF16Q5VV41 709 aa11.76□□□□□ -0.53
CASC19-230ENST00000641421 MTERF4Q7Z6M4 381 aaKnown RBP11.76□□□□□ -0.53
CASC19-230ENST00000641421 TRIM59Q8IWR1 403 aa11.76□□□□□ -0.53
CASC19-230ENST00000641421 MYCT1Q8N699 235 aa11.76□□□□□ -0.53
CASC19-230ENST00000641421 ANKRD7Q92527 254 aa11.76□□□□□ -0.53
CASC19-230ENST00000641421 WNK4Q96J92 1243 aa11.76□□□□□ -0.53
CASC19-230ENST00000641421 RMDN3Q96TC7 470 aa11.76□□□□□ -0.53
CASC19-230ENST00000641421 PDCD2LQ9BRP1 358 aa11.76□□□□□ -0.53
CASC19-230ENST00000641421 EDEM3Q9BZQ6 932 aa11.76□□□□□ -0.53
CASC19-230ENST00000641421 SPON1Q9HCB6 807 aa11.76□□□□□ -0.53
CASC19-230ENST00000641421 PXMP2Q9NR77 195 aa11.76□□□□□ -0.53
CASC19-230ENST00000641421 TBC1D22BQ9NU19 505 aa11.76□□□□□ -0.53
CASC19-230ENST00000641421 TYW1Q9NV66 732 aaKnown RBP11.76□□□□□ -0.53
CASC19-230ENST00000641421 WRAP73Q9P2S5 460 aaPredicted RBP11.76□□□□□ -0.53
CASC19-230ENST00000641421 SEL1LQ9UBV2 794 aa11.76□□□□□ -0.53
CASC19-230ENST00000641421 FAM184BQ9ULE4 1060 aa11.76□□□□□ -0.53
CASC19-230ENST00000641421 ODF2LQ9ULJ1 636 aa11.76□□□□□ -0.53
CASC19-230ENST00000641421 ADAMTS5Q9UNA0 930 aa11.76□□□□□ -0.53
CASC19-230ENST00000641421 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.76□□□□□ -0.53
CASC19-230ENST00000641421 A0A0U1RQJ8 604 aa11.75□□□□□ -0.53
CASC19-230ENST00000641421 SFI1A8K8P3 1242 aa11.75□□□□□ -0.53
CASC19-230ENST00000641421 FANCGO15287 622 aa11.75□□□□□ -0.53
CASC19-230ENST00000641421 EIF3DO15371 548 aaKnown RBP eCLIP11.75□□□□□ -0.53
CASC19-230ENST00000641421 ERCC3P19447 782 aa11.75□□□□□ -0.53
CASC19-230ENST00000641421 NR2F2P24468 414 aa11.75□□□□□ -0.53
CASC19-230ENST00000641421 CCND2P30279 289 aa11.75□□□□□ -0.53
CASC19-230ENST00000641421 HOXD13P35453 343 aa11.75□□□□□ -0.53
CASC19-230ENST00000641421 ITGB3BPQ13352 177 aaPredicted RBP11.75□□□□□ -0.53
CASC19-230ENST00000641421 SNRNP48Q6IEG0 339 aaKnown RBP11.75□□□□□ -0.53
CASC19-230ENST00000641421 XRRA1Q6P2D8 792 aa11.75□□□□□ -0.53
CASC19-230ENST00000641421 CATSPERGQ6ZRH7 1159 aa11.75□□□□□ -0.53
CASC19-230ENST00000641421 CCDC170Q8IYT3 715 aa11.75□□□□□ -0.53
CASC19-230ENST00000641421 NEK11Q8NG66 645 aa11.75□□□□□ -0.53
CASC19-230ENST00000641421 SMCR8Q8TEV9 937 aaPredicted RBP11.75□□□□□ -0.53
CASC19-230ENST00000641421 ATRIPQ8WXE1 791 aa11.75□□□□□ -0.53
CASC19-230ENST00000641421 MAP7D2Q96T17 732 aa11.75□□□□□ -0.53
CASC19-230ENST00000641421 ZSWIM4Q9H7M6 989 aa11.75□□□□□ -0.53
CASC19-230ENST00000641421 PARVGQ9HBI0 331 aa11.75□□□□□ -0.53
CASC19-230ENST00000641421 POLD4Q9HCU8 107 aa11.75□□□□□ -0.53
CASC19-230ENST00000641421 FAM207AQ9NSI2 230 aaPredicted RBP11.75□□□□□ -0.53
CASC19-230ENST00000641421 AFG3L2Q9Y4W6 797 aa11.75□□□□□ -0.53
CASC19-230ENST00000641421 RIPK3Q9Y572 518 aa11.75□□□□□ -0.53
CASC19-230ENST00000641421 DICER1Q9UPY3 1922 aaKnown RBP11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms