RNA–Protein interactions for RNA: ENST00000639943.1

PAX6-261, Transcript of paired box 6, humanhuman

TSL 5

Gene PAX6, Length 2,584 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-261ENST00000639943 SLC30A10Q6XR72 485 aa13.56□□□□□ -0.24
PAX6-261ENST00000639943 LRRC55Q6ZSA7 311 aa13.56□□□□□ -0.24
PAX6-261ENST00000639943 SULF1Q8IWU6 871 aa13.56□□□□□ -0.24
PAX6-261ENST00000639943 RETREG2Q8NC44 543 aa13.56□□□□□ -0.24
PAX6-261ENST00000639943 WNK4Q96J92 1243 aa13.56□□□□□ -0.24
PAX6-261ENST00000639943 CEP63Q96MT8 703 aa13.56□□□□□ -0.24
PAX6-261ENST00000639943 HOXC10Q9NYD6 342 aa13.56□□□□□ -0.24
PAX6-261ENST00000639943 ATP2A1O14983 1001 aa13.55□□□□□ -0.24
PAX6-261ENST00000639943 TBCAO75347 108 aaKnown RBP13.55□□□□□ -0.24
PAX6-261ENST00000639943 GAP43P17677 238 aa13.55□□□□□ -0.24
PAX6-261ENST00000639943 MRPS9P82933 396 aaKnown RBP13.55□□□□□ -0.24
PAX6-261ENST00000639943 PRKG1Q13976 671 aa13.55□□□□□ -0.24
PAX6-261ENST00000639943 PGM5Q15124 567 aa13.55□□□□□ -0.24
PAX6-261ENST00000639943 MIIPQ5JXC2 388 aa13.55□□□□□ -0.24
PAX6-261ENST00000639943 SNRNP48Q6IEG0 339 aaKnown RBP13.55□□□□□ -0.24
PAX6-261ENST00000639943 RINT1Q6NUQ1 792 aa13.55□□□□□ -0.24
PAX6-261ENST00000639943 XRRA1Q6P2D8 792 aa13.55□□□□□ -0.24
PAX6-261ENST00000639943 NSMFQ6X4W1 530 aa13.55□□□□□ -0.24
PAX6-261ENST00000639943 REXO1L1PQ8IX06 675 aa13.55□□□□□ -0.24
PAX6-261ENST00000639943 KIF18AQ8NI77 898 aa13.55□□□□□ -0.24
PAX6-261ENST00000639943 SCFD1Q8WVM8 642 aa13.55□□□□□ -0.24
PAX6-261ENST00000639943 ERGIC2Q96RQ1 377 aa13.55□□□□□ -0.24
PAX6-261ENST00000639943 RMDN3Q96TC7 470 aa13.55□□□□□ -0.24
PAX6-261ENST00000639943 SYT17Q9BSW7 474 aa13.55□□□□□ -0.24
PAX6-261ENST00000639943 RUSC1Q9BVN2 902 aa13.55□□□□□ -0.24
PAX6-261ENST00000639943 MAF1Q9H063 256 aa13.55□□□□□ -0.24
PAX6-261ENST00000639943 AGO4Q9HCK5 861 aaKnown RBP13.55□□□□□ -0.24
PAX6-261ENST00000639943 PXMP2Q9NR77 195 aa13.55□□□□□ -0.24
PAX6-261ENST00000639943 ABHD10Q9NUJ1 306 aa13.55□□□□□ -0.24
PAX6-261ENST00000639943 COL4A3BPQ9Y5P4 624 aa13.55□□□□□ -0.24
PAX6-261ENST00000639943 CLSTN1O94985 981 aa13.55□□□□□ -0.24
PAX6-261ENST00000639943 GNA14O95837 355 aa13.55□□□□□ -0.24
PAX6-261ENST00000639943 EIF2AK2P19525 551 aaKnown RBP13.55□□□□□ -0.24
PAX6-261ENST00000639943 KRT9P35527 623 aa13.55□□□□□ -0.24
PAX6-261ENST00000639943 MAN2A1Q16706 1144 aa13.55□□□□□ -0.24
PAX6-261ENST00000639943 VWA3BQ502W6 1294 aa13.55□□□□□ -0.24
PAX6-261ENST00000639943 ARHGEF16Q5VV41 709 aa13.55□□□□□ -0.24
PAX6-261ENST00000639943 MIER3Q7Z3K6 550 aa13.55□□□□□ -0.24
PAX6-261ENST00000639943 TMTC1Q8IUR5 882 aa13.55□□□□□ -0.24
PAX6-261ENST00000639943 PIGOQ8TEQ8 1089 aa13.55□□□□□ -0.24
PAX6-261ENST00000639943 ZNF592Q92610 1267 aa13.55□□□□□ -0.24
PAX6-261ENST00000639943 IQCDQ96DY2 449 aa13.55□□□□□ -0.24
PAX6-261ENST00000639943 PDCD2LQ9BRP1 358 aa13.55□□□□□ -0.24
PAX6-261ENST00000639943 FGFBP2Q9BYJ0 223 aa13.55□□□□□ -0.24
PAX6-261ENST00000639943 KCND2Q9NZV8 630 aa13.55□□□□□ -0.24
PAX6-261ENST00000639943 RIPK3Q9Y572 518 aa13.55□□□□□ -0.24
PAX6-261ENST00000639943 WDR90Q96KV7 1748 aa13.54□□□□□ -0.24
PAX6-261ENST00000639943 TRAF5O00463 557 aa13.54□□□□□ -0.24
PAX6-261ENST00000639943 PPP1R12BO60237 982 aaPredicted RBP13.54□□□□□ -0.24
PAX6-261ENST00000639943 MTMR1Q13613 665 aa13.54□□□□□ -0.24
PAX6-261ENST00000639943 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.54□□□□□ -0.24
PAX6-261ENST00000639943 SFR1Q86XK3 245 aa13.54□□□□□ -0.24
PAX6-261ENST00000639943 KCTD10Q9H3F6 313 aa13.54□□□□□ -0.24
PAX6-261ENST00000639943 TBC1D22BQ9NU19 505 aa13.54□□□□□ -0.24
PAX6-261ENST00000639943 CAPN11Q9UMQ6 739 aa13.54□□□□□ -0.24
PAX6-261ENST00000639943 LUC7L2Q9Y383 392 aaKnown RBP13.54□□□□□ -0.24
PAX6-261ENST00000639943 SNCAIPQ9Y6H5 919 aa13.54□□□□□ -0.24
PAX6-261ENST00000639943 P4HBP07237 508 aaKnown RBP13.54□□□□□ -0.24
PAX6-261ENST00000639943 GTF2F1P35269 517 aaKnown RBP eCLIP13.54□□□□□ -0.24
PAX6-261ENST00000639943 BAATQ14032 418 aaPredicted RBP13.54□□□□□ -0.24
PAX6-261ENST00000639943 VGLL4Q14135 290 aa13.54□□□□□ -0.24
PAX6-261ENST00000639943 EDRF1Q3B7T1 1238 aa13.54□□□□□ -0.24
PAX6-261ENST00000639943 CYP26C1Q6V0L0 522 aa13.54□□□□□ -0.24
PAX6-261ENST00000639943 TOGARAM2Q6ZUX3 1019 aa13.54□□□□□ -0.24
PAX6-261ENST00000639943 C1orf186Q6ZWK4 172 aa13.54□□□□□ -0.24
PAX6-261ENST00000639943 NELFCDQ8IXH7 590 aa13.54□□□□□ -0.24
PAX6-261ENST00000639943 LXNQ9BS40 222 aa13.54□□□□□ -0.24
PAX6-261ENST00000639943 TEX13BQ9BXU2 312 aa13.54□□□□□ -0.24
PAX6-261ENST00000639943 NDST4Q9H3R1 872 aa13.54□□□□□ -0.24
PAX6-261ENST00000639943 ZNF214Q9UL59 606 aaPredicted RBP13.54□□□□□ -0.24
PAX6-261ENST00000639943 CSADQ9Y600 493 aa13.54□□□□□ -0.24
PAX6-261ENST00000639943 TTC26A0AVF1 554 aa13.53□□□□□ -0.24
PAX6-261ENST00000639943 SOWAHDA6NJG2 315 aa13.53□□□□□ -0.24
PAX6-261ENST00000639943 RIOK3O14730 519 aaKnown RBP13.53□□□□□ -0.24
PAX6-261ENST00000639943 DHX15O43143 795 aaKnown RBP13.53□□□□□ -0.24
PAX6-261ENST00000639943 MYCLP12524 364 aaPredicted RBP13.53□□□□□ -0.24
PAX6-261ENST00000639943 TMEM132BQ14DG7 1078 aa13.53□□□□□ -0.24
PAX6-261ENST00000639943 SYCP1Q15431 976 aa13.53□□□□□ -0.24
PAX6-261ENST00000639943 TSR1Q2NL82 804 aaKnown RBP13.53□□□□□ -0.24
PAX6-261ENST00000639943 C9orf131Q5VYM1 1079 aa13.53□□□□□ -0.24
PAX6-261ENST00000639943 EPM2AIP1Q7L775 607 aaPredicted RBP13.53□□□□□ -0.24
PAX6-261ENST00000639943 OR8K1Q8NGG5 319 aa13.53□□□□□ -0.24
PAX6-261ENST00000639943 PTPRFP10586 1907 aa13.53□□□□□ -0.24
PAX6-261ENST00000639943 RNF225M0QZC1 329 aaPredicted RBP13.53□□□□□ -0.24
PAX6-261ENST00000639943 DDX39AO00148 427 aaKnown RBP13.53□□□□□ -0.24
PAX6-261ENST00000639943 DYNC1I1O14576 645 aa13.53□□□□□ -0.24
PAX6-261ENST00000639943 FAM13AO94988 1023 aa13.53□□□□□ -0.24
PAX6-261ENST00000639943 CCDC175P0C221 793 aa13.53□□□□□ -0.24
PAX6-261ENST00000639943 CCND2P30279 289 aa13.53□□□□□ -0.24
PAX6-261ENST00000639943 FIGNQ5HY92 759 aa13.53□□□□□ -0.24
PAX6-261ENST00000639943 ZC3H3Q8IXZ2 948 aaKnown RBP13.53□□□□□ -0.24
PAX6-261ENST00000639943 OLFML3Q9NRN5 406 aa13.53□□□□□ -0.24
PAX6-261ENST00000639943 MYH11P35749 1972 aa13.52□□□□□ -0.24
PAX6-261ENST00000639943 RSPH10B2B2RC85 870 aa13.52□□□□□ -0.24
PAX6-261ENST00000639943 RSPH10BP0C881 870 aa13.52□□□□□ -0.24
PAX6-261ENST00000639943 YBX3P16989 372 aaKnown RBP eCLIP13.52□□□□□ -0.24
PAX6-261ENST00000639943 TRIM21P19474 475 aaKnown RBP13.52□□□□□ -0.24
PAX6-261ENST00000639943 IREB2P48200 963 aaKnown RBP13.52□□□□□ -0.24
PAX6-261ENST00000639943 ETF1P62495 437 aaKnown RBP13.52□□□□□ -0.24
PAX6-261ENST00000639943 ITGB3BPQ13352 177 aaPredicted RBP13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms