RNA–Protein interactions for RNA: ENST00000638144.1

CLN6-225, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 576 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-225ENST00000638144 ERAP1Q9NZ08 941 aa14.17□□□□□ -0.14
CLN6-225ENST00000638144 TCEAL9Q9UHQ7 104 aa14.17□□□□□ -0.14
CLN6-225ENST00000638144 TRPC6Q9Y210 931 aa14.17□□□□□ -0.14
CLN6-225ENST00000638144 SAMM50Q9Y512 469 aa14.17□□□□□ -0.14
CLN6-225ENST00000638144 CYP3A7-CYP3A51PA0A087WV96 503 aa14.16□□□□□ -0.14
CLN6-225ENST00000638144 KIF28PB7ZC32 967 aa14.16□□□□□ -0.14
CLN6-225ENST00000638144 CTSHP09668 335 aa14.16□□□□□ -0.14
CLN6-225ENST00000638144 CYP3A7P24462 503 aa14.16□□□□□ -0.14
CLN6-225ENST00000638144 HOXC8P31273 242 aa14.16□□□□□ -0.14
CLN6-225ENST00000638144 STAT5BP51692 787 aa14.16□□□□□ -0.14
CLN6-225ENST00000638144 BFSP2Q13515 415 aa14.16□□□□□ -0.14
CLN6-225ENST00000638144 PLCB4Q15147 1175 aa14.16□□□□□ -0.14
CLN6-225ENST00000638144 GRIK4Q16099 956 aa14.16□□□□□ -0.14
CLN6-225ENST00000638144 UGCGQ16739 394 aa14.16□□□□□ -0.14
CLN6-225ENST00000638144 TRIM71Q2Q1W2 868 aaKnown RBP14.16□□□□□ -0.14
CLN6-225ENST00000638144 SWSAP1Q6NVH7 229 aa14.16□□□□□ -0.14
CLN6-225ENST00000638144 RUFY4Q6ZNE9 571 aa14.16□□□□□ -0.14
CLN6-225ENST00000638144 ZNF365Q70YC5 407 aa14.16□□□□□ -0.14
CLN6-225ENST00000638144 SERINC5Q86VE9 423 aa14.16□□□□□ -0.14
CLN6-225ENST00000638144 ETNPPLQ8TBG4 499 aa14.16□□□□□ -0.14
CLN6-225ENST00000638144 RNPC3Q96LT9 517 aaKnown RBP14.16□□□□□ -0.14
CLN6-225ENST00000638144 MBOAT7Q96N66 472 aa14.16□□□□□ -0.14
CLN6-225ENST00000638144 TEKT3Q9BXF9 490 aa14.16□□□□□ -0.14
CLN6-225ENST00000638144 IL23AQ9NPF7 189 aa14.16□□□□□ -0.14
CLN6-225ENST00000638144 SIP14410 1827 aa14.15□□□□□ -0.14
CLN6-225ENST00000638144 A0A1W2PPC1 479 aa14.15□□□□□ -0.14
CLN6-225ENST00000638144 PSMD10O75832 226 aa14.15□□□□□ -0.14
CLN6-225ENST00000638144 ATG7O95352 703 aa14.15□□□□□ -0.14
CLN6-225ENST00000638144 CKBP12277 381 aa14.15□□□□□ -0.14
CLN6-225ENST00000638144 INSRRP14616 1297 aa14.15□□□□□ -0.14
CLN6-225ENST00000638144 THPOP40225 353 aa14.15□□□□□ -0.14
CLN6-225ENST00000638144 KRT76Q01546 638 aa14.15□□□□□ -0.14
CLN6-225ENST00000638144 PTK7Q13308 1070 aa14.15□□□□□ -0.14
CLN6-225ENST00000638144 SAFBQ15424 915 aaKnown RBP eCLIP14.15□□□□□ -0.14
CLN6-225ENST00000638144 TMEM240Q5SV17 173 aa14.15□□□□□ -0.14
CLN6-225ENST00000638144 ZNF618Q5T7W0 954 aa14.15□□□□□ -0.14
CLN6-225ENST00000638144 ZNF746Q6NUN9 644 aaPredicted RBP14.15□□□□□ -0.14
CLN6-225ENST00000638144 MIS18BP1Q6P0N0 1132 aa14.15□□□□□ -0.14
CLN6-225ENST00000638144 PDXDC2PQ6P474 469 aa14.15□□□□□ -0.14
CLN6-225ENST00000638144 LRRC8DQ7L1W4 858 aa14.15□□□□□ -0.14
CLN6-225ENST00000638144 OTOP2Q7RTS6 562 aa14.15□□□□□ -0.14
CLN6-225ENST00000638144 RETREG2Q8NC44 543 aa14.15□□□□□ -0.14
CLN6-225ENST00000638144 FBXO18Q8NFZ0 1043 aa14.15□□□□□ -0.14
CLN6-225ENST00000638144 ZNF302Q9NR11 478 aa14.15□□□□□ -0.14
CLN6-225ENST00000638144 GABBR1Q9UBS5 961 aa14.15□□□□□ -0.14
CLN6-225ENST00000638144 EVPLQ92817 2033 aa14.14□□□□□ -0.15
CLN6-225ENST00000638144 IGKV6D-21A0A0A0MT36 114 aa14.14□□□□□ -0.15
CLN6-225ENST00000638144 POTEB3A0JP26 581 aa14.14□□□□□ -0.15
CLN6-225ENST00000638144 PITPNM1O00562 1244 aa14.14□□□□□ -0.15
CLN6-225ENST00000638144 PSAPP07602 524 aa14.14□□□□□ -0.15
CLN6-225ENST00000638144 IQCF3P0C7M6 154 aa14.14□□□□□ -0.15
CLN6-225ENST00000638144 SELPP16109 830 aa14.14□□□□□ -0.15
CLN6-225ENST00000638144 ATP4AP20648 1035 aa14.14□□□□□ -0.15
CLN6-225ENST00000638144 GJB2P29033 226 aa14.14□□□□□ -0.15
CLN6-225ENST00000638144 MBTPS1Q14703 1052 aa14.14□□□□□ -0.15
CLN6-225ENST00000638144 MARCH8Q5T0T0 291 aa14.14□□□□□ -0.15
CLN6-225ENST00000638144 FAM160B1Q5W0V3 765 aa14.14□□□□□ -0.15
CLN6-225ENST00000638144 FAM109BQ6ICB4 259 aaPredicted RBP14.14□□□□□ -0.15
CLN6-225ENST00000638144 TRAF7Q6Q0C0 670 aa14.14□□□□□ -0.15
CLN6-225ENST00000638144 POTEBQ6S5H4 581 aa14.14□□□□□ -0.15
CLN6-225ENST00000638144 MOXD1Q6UVY6 613 aa14.14□□□□□ -0.15
CLN6-225ENST00000638144 CCDC155Q8N6L0 562 aa14.14□□□□□ -0.15
CLN6-225ENST00000638144 CAGE1Q8TC20 777 aa14.14□□□□□ -0.15
CLN6-225ENST00000638144 HAS1Q92839 578 aa14.14□□□□□ -0.15
CLN6-225ENST00000638144 RIT2Q99578 217 aa14.14□□□□□ -0.15
CLN6-225ENST00000638144 OSBPL7Q9BZF2 842 aa14.14□□□□□ -0.15
CLN6-225ENST00000638144 DISC1Q9NRI5 854 aa14.14□□□□□ -0.15
CLN6-225ENST00000638144 CXXC1Q9P0U4 656 aaPredicted RBP14.14□□□□□ -0.15
CLN6-225ENST00000638144 TUBE1Q9UJT0 475 aa14.14□□□□□ -0.15
CLN6-225ENST00000638144 PCDHA10Q9Y5I2 948 aa14.14□□□□□ -0.15
CLN6-225ENST00000638144 GBF1Q92538 1859 aa14.14□□□□□ -0.15
CLN6-225ENST00000638144 NRCAMQ92823 1304 aa14.14□□□□□ -0.15
CLN6-225ENST00000638144 WDR64B1ANS9 1081 aa14.13□□□□□ -0.15
CLN6-225ENST00000638144 EML1O00423 815 aa14.13□□□□□ -0.15
CLN6-225ENST00000638144 GCFC2P16383 781 aaKnown RBP14.13□□□□□ -0.15
CLN6-225ENST00000638144 MCM2P49736 904 aa14.13□□□□□ -0.15
CLN6-225ENST00000638144 ADAM17P78536 824 aa14.13□□□□□ -0.15
CLN6-225ENST00000638144 GNL2Q13823 731 aaKnown RBP14.13□□□□□ -0.15
CLN6-225ENST00000638144 NBR1Q14596 966 aa14.13□□□□□ -0.15
CLN6-225ENST00000638144 GPNMBQ14956 572 aa14.13□□□□□ -0.15
CLN6-225ENST00000638144 TCTN1Q2MV58 587 aa14.13□□□□□ -0.15
CLN6-225ENST00000638144 PSRC1Q6PGN9 363 aaPredicted RBP14.13□□□□□ -0.15
CLN6-225ENST00000638144 PLPPR4Q7Z2D5 763 aa14.13□□□□□ -0.15
CLN6-225ENST00000638144 MIER3Q7Z3K6 550 aa14.13□□□□□ -0.15
CLN6-225ENST00000638144 CKAP2LQ8IYA6 745 aa14.13□□□□□ -0.15
CLN6-225ENST00000638144 SMAP1Q8IYB5 467 aaPredicted RBP14.13□□□□□ -0.15
CLN6-225ENST00000638144 AFAP1L1Q8TED9 768 aa14.13□□□□□ -0.15
CLN6-225ENST00000638144 FTOQ9C0B1 505 aaKnown RBP eCLIP14.13□□□□□ -0.15
CLN6-225ENST00000638144 FAM49AQ9H0Q0 323 aaPredicted RBP14.13□□□□□ -0.15
CLN6-225ENST00000638144 KCNMB3Q9NPA1 279 aa14.13□□□□□ -0.15
CLN6-225ENST00000638144 FOXD4L1Q9NU39 408 aa14.13□□□□□ -0.15
CLN6-225ENST00000638144 VAV3Q9UKW4 847 aa14.13□□□□□ -0.15
CLN6-225ENST00000638144 LOXHD1Q8IVV2 1947 aa14.13□□□□□ -0.15
CLN6-225ENST00000638144 IGSF9BQ9UPX0 1349 aa14.13□□□□□ -0.15
CLN6-225ENST00000638144 PTPRSQ13332 1948 aa14.12□□□□□ -0.15
CLN6-225ENST00000638144 CHD9Q3L8U1 2897 aa14.12□□□□□ -0.15
CLN6-225ENST00000638144 TMEM150BA6NC51 233 aa14.12□□□□□ -0.15
CLN6-225ENST00000638144 ZBBXA8MT70 800 aa14.12□□□□□ -0.15
CLN6-225ENST00000638144 GRXCR1A8MXD5 290 aa14.12□□□□□ -0.15
CLN6-225ENST00000638144 ZNF862O60290 1169 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms