RNA–Protein interactions for RNA: ENST00000638016.1

PNKP-230, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 109 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-230ENST00000638016 KCNJ6P48051 423 aa20.18■□□□□ 0.82
PNKP-230ENST00000638016 SCRN1Q12765 414 aa20.18■□□□□ 0.82
PNKP-230ENST00000638016 MARCH8Q5T0T0 291 aa20.18■□□□□ 0.82
PNKP-230ENST00000638016 FAM117BQ6P1L5 589 aa20.18■□□□□ 0.82
PNKP-230ENST00000638016 TEX2Q8IWB9 1127 aa20.18■□□□□ 0.82
PNKP-230ENST00000638016 CCDC12Q8WUD4 166 aaPredicted RBP20.18■□□□□ 0.82
PNKP-230ENST00000638016 SMARCAD1Q9H4L7 1026 aa20.18■□□□□ 0.82
PNKP-230ENST00000638016 TPCN1Q9ULQ1 816 aa20.18■□□□□ 0.82
PNKP-230ENST00000638016 NRCAMQ92823 1304 aa20.18■□□□□ 0.82
PNKP-230ENST00000638016 CPLX1O14810 134 aa20.17■□□□□ 0.82
PNKP-230ENST00000638016 PARNO95453 639 aaKnown RBP20.17■□□□□ 0.82
PNKP-230ENST00000638016 GNAT1P11488 350 aa20.17■□□□□ 0.82
PNKP-230ENST00000638016 GNA11P29992 359 aa20.17■□□□□ 0.82
PNKP-230ENST00000638016 SSRP1Q08945 709 aaKnown RBP20.17■□□□□ 0.82
PNKP-230ENST00000638016 PLCB4Q15147 1175 aa20.17■□□□□ 0.82
PNKP-230ENST00000638016 PRR16Q569H4 304 aa20.17■□□□□ 0.82
PNKP-230ENST00000638016 NIPA1Q7RTP0 329 aa20.17■□□□□ 0.82
PNKP-230ENST00000638016 CCDC148Q8NFR7 591 aa20.17■□□□□ 0.82
PNKP-230ENST00000638016 TUBE1Q9UJT0 475 aa20.17■□□□□ 0.82
PNKP-230ENST00000638016 LARGE1O95461 756 aa20.16■□□□□ 0.82
PNKP-230ENST00000638016 CHRNA1P02708 482 aa20.16■□□□□ 0.82
PNKP-230ENST00000638016 INSRRP14616 1297 aa20.16■□□□□ 0.82
PNKP-230ENST00000638016 NLRP5P59047 1200 aa20.16■□□□□ 0.82
PNKP-230ENST00000638016 MKRN4PQ13434 485 aaPredicted RBP20.16■□□□□ 0.82
PNKP-230ENST00000638016 NPY5RQ15761 445 aa20.16■□□□□ 0.82
PNKP-230ENST00000638016 PLEKHG4Q58EX7 1191 aa20.16■□□□□ 0.82
PNKP-230ENST00000638016 CCDC60Q8IWA6 550 aaPredicted RBP20.16■□□□□ 0.82
PNKP-230ENST00000638016 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.16■□□□□ 0.82
PNKP-230ENST00000638016 TRIM22Q8IYM9 498 aa20.16■□□□□ 0.82
PNKP-230ENST00000638016 PHOSPHO2Q8TCD6 241 aa20.16■□□□□ 0.82
PNKP-230ENST00000638016 DNAJB3Q8WWF6 145 aa20.16■□□□□ 0.82
PNKP-230ENST00000638016 PPM1EQ8WY54 764 aa20.16■□□□□ 0.82
PNKP-230ENST00000638016 GJA10Q969M2 543 aa20.16■□□□□ 0.82
PNKP-230ENST00000638016 LENG9Q96B70 501 aa20.16■□□□□ 0.82
PNKP-230ENST00000638016 PRDM6Q9NQX0 595 aa20.16■□□□□ 0.82
PNKP-230ENST00000638016 GJB4Q9NTQ9 266 aa20.16■□□□□ 0.82
PNKP-230ENST00000638016 TRPC6Q9Y210 931 aa20.16■□□□□ 0.82
PNKP-230ENST00000638016 VCANP13611 3396 aa20.15■□□□□ 0.82
PNKP-230ENST00000638016 IPO5O00410 1097 aaKnown RBP20.15■□□□□ 0.82
PNKP-230ENST00000638016 TLL1O43897 1013 aa20.15■□□□□ 0.82
PNKP-230ENST00000638016 IGFBP4P22692 258 aa20.15■□□□□ 0.82
PNKP-230ENST00000638016 STAT5BP51692 787 aa20.15■□□□□ 0.82
PNKP-230ENST00000638016 AK2P54819 239 aa20.15■□□□□ 0.82
PNKP-230ENST00000638016 TAP1Q03518 808 aa20.15■□□□□ 0.82
PNKP-230ENST00000638016 GAS2L1Q99501 681 aaPredicted RBP20.15■□□□□ 0.82
PNKP-230ENST00000638016 ZNF577Q9BSK1 485 aa20.15■□□□□ 0.82
PNKP-230ENST00000638016 FAM49AQ9H0Q0 323 aaPredicted RBP20.15■□□□□ 0.82
PNKP-230ENST00000638016 AZI2Q9H6S1 392 aa20.15■□□□□ 0.82
PNKP-230ENST00000638016 PRRC2BQ5JSZ5 2229 aaKnown RBP20.15■□□□□ 0.82
PNKP-230ENST00000638016 WDR81Q562E7 1941 aa20.14■□□□□ 0.81
PNKP-230ENST00000638016 LOXHD1Q8IVV2 1947 aa20.14■□□□□ 0.81
PNKP-230ENST00000638016 ABHD14A-ACY1A0A1B0GW23 586 aa20.14■□□□□ 0.81
PNKP-230ENST00000638016 MBLAC1A4D2B0 266 aaPredicted RBP20.14■□□□□ 0.81
PNKP-230ENST00000638016 ATG7O95352 703 aa20.14■□□□□ 0.81
PNKP-230ENST00000638016 DEXIO95424 95 aa20.14■□□□□ 0.81
PNKP-230ENST00000638016 GHRP10912 638 aa20.14■□□□□ 0.81
PNKP-230ENST00000638016 MGAT3Q09327 533 aa20.14■□□□□ 0.81
PNKP-230ENST00000638016 IKBKEQ14164 716 aa20.14■□□□□ 0.81
PNKP-230ENST00000638016 ABHD15Q6UXT9 468 aa20.14■□□□□ 0.81
PNKP-230ENST00000638016 KCNJ14Q9UNX9 436 aa20.14■□□□□ 0.81
PNKP-230ENST00000638016 COL4A4P53420 1690 aaPredicted RBP20.13■□□□□ 0.81
PNKP-230ENST00000638016 IGKV6D-21A0A0A0MT36 114 aa20.13■□□□□ 0.81
PNKP-230ENST00000638016 BACH1O14867 736 aa20.13■□□□□ 0.81
PNKP-230ENST00000638016 CAND2O75155 1236 aa20.13■□□□□ 0.81
PNKP-230ENST00000638016 CTDNEP1O95476 244 aa20.13■□□□□ 0.81
PNKP-230ENST00000638016 ATP4AP20648 1035 aa20.13■□□□□ 0.81
PNKP-230ENST00000638016 CIITAP33076 1130 aa20.13■□□□□ 0.81
PNKP-230ENST00000638016 TMEM62Q0P6H9 643 aa20.13■□□□□ 0.81
PNKP-230ENST00000638016 CCDC85BQ15834 202 aaPredicted RBP20.13■□□□□ 0.81
PNKP-230ENST00000638016 FAM26DQ5JW98 314 aa20.13■□□□□ 0.81
PNKP-230ENST00000638016 KRT40Q6A162 431 aa20.13■□□□□ 0.81
PNKP-230ENST00000638016 TRMT1LQ7Z2T5 733 aaKnown RBP20.13■□□□□ 0.81
PNKP-230ENST00000638016 MYOCDQ8IZQ8 938 aa20.13■□□□□ 0.81
PNKP-230ENST00000638016 NECAB1Q8N987 351 aa20.13■□□□□ 0.81
PNKP-230ENST00000638016 BICD2Q8TD16 824 aa20.13■□□□□ 0.81
PNKP-230ENST00000638016 ARNTL2Q8WYA1 636 aa20.13■□□□□ 0.81
PNKP-230ENST00000638016 SLKQ9H2G2 1235 aaPredicted RBP20.13■□□□□ 0.81
PNKP-230ENST00000638016 SH3GLB2Q9NR46 395 aa20.13■□□□□ 0.81
PNKP-230ENST00000638016 PCDHA4Q9UN74 947 aa20.13■□□□□ 0.81
PNKP-230ENST00000638016 MYH9P35579 1960 aaKnown RBP20.13■□□□□ 0.81
PNKP-230ENST00000638016 EVPLQ92817 2033 aa20.12■□□□□ 0.81
PNKP-230ENST00000638016 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.12■□□□□ 0.81
PNKP-230ENST00000638016 POTEB3A0JP26 581 aa20.12■□□□□ 0.81
PNKP-230ENST00000638016 M0R2N6 131 aa20.12■□□□□ 0.81
PNKP-230ENST00000638016 GJB5O95377 273 aa20.12■□□□□ 0.81
PNKP-230ENST00000638016 TDP2O95551 362 aa20.12■□□□□ 0.81
PNKP-230ENST00000638016 ANAPC15P60006 121 aa20.12■□□□□ 0.81
PNKP-230ENST00000638016 SETQ01105 290 aaPredicted RBP20.12■□□□□ 0.81
PNKP-230ENST00000638016 SWSAP1Q6NVH7 229 aa20.12■□□□□ 0.81
PNKP-230ENST00000638016 TAF2Q6P1X5 1199 aa20.12■□□□□ 0.81
PNKP-230ENST00000638016 POTEBQ6S5H4 581 aa20.12■□□□□ 0.81
PNKP-230ENST00000638016 PLPPR4Q7Z2D5 763 aa20.12■□□□□ 0.81
PNKP-230ENST00000638016 TBCKQ8TEA7 893 aa20.12■□□□□ 0.81
PNKP-230ENST00000638016 ZBED2Q9BTP6 218 aa20.12■□□□□ 0.81
PNKP-230ENST00000638016 CDY2AQ9Y6F7 541 aa20.12■□□□□ 0.81
PNKP-230ENST00000638016 REV3LO60673 3130 aa20.11■□□□□ 0.81
PNKP-230ENST00000638016 MSH4O15457 936 aa20.11■□□□□ 0.81
PNKP-230ENST00000638016 PFKFB2O60825 505 aa20.11■□□□□ 0.81
PNKP-230ENST00000638016 LPIN1Q14693 890 aa20.11■□□□□ 0.81
PNKP-230ENST00000638016 BLIDQ8IZY5 108 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 95.4 ms